Os07g0530400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0530400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.31 | 0.461 | 12.3 | -0.362 | 3.11 | 2.34 | 0.0457 | -0.662 | -0.113 | 7.14 | 1.51 | 89 | 8.74 | -- |
| 97.4 | 0.46 | 12.3 | -0.397 | 3.1 | 2.44 | 0.604 | -- | -0.0978 | 7.35 | 2.194 | 89 | 8.44 | -- |
| 96.18 | 0.457 | 12.3 | -0.36 | 3.09 | 2.36 | -- | -0.641 | -0.104 | 7.22 | 1.909 | 88 | 8.53 | -- |
| 98.23 | 0.462 | 12.3 | -0.385 | 3.11 | 2.42 | -- | -- | -0.108 | 7.31 | 2.12 | 89 | 8.48 | -- |
| 146.11 | 0.563 | 12.4 | -0.436 | -- | 3.22 | -- | -0.406 | -0.106 | -- | 18.67 | 678 | 8.45 | -- |
| 152.42 | 0.579 | 12.3 | -0.484 | 2.95 | -- | -0.17 | -- | -0.21 | 4.1 | -- | -- | -- | -- |
| 152.5 | 0.578 | 12.3 | -0.482 | 2.95 | -- | -- | -- | -0.209 | 4.11 | -- | -- | -- | -- |
| 145.97 | 0.563 | 12.4 | -0.454 | -- | 3.27 | -- | -- | -0.128 | -- | 24.33 | 678 | 8.25 | -- |
| 102.11 | 0.471 | 12.3 | -- | 3.1 | 2.43 | -- | -- | -0.0682 | 7.3 | 1.877 | 92 | 8.58 | -- |
| 624.03 | 1.17 | 12.4 | -0.363 | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
| 158.63 | 0.589 | 12.3 | -- | 2.94 | -- | -- | -- | -0.155 | 4.11 | -- | -- | -- | -- |
| 151.54 | 0.573 | 12.3 | -- | -- | 3.25 | -- | -- | -0.0753 | -- | 25.4 | 682 | 8.28 | -- |
| 627.51 | 1.17 | 12.3 | -- | -- | -- | -- | -- | -0.0903 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.87 | radiation | 1.0 | 90 | < th | dose dependent | sin | 15 | NA |
| 2 | 97.69 | radiation | 1.0 | 90 | < th | dose independent | sin | 15 | NA |
| 5 | 98.33 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 18 |
| 6 | 98.39 | radiation | 1.0 | 90 | > th | dose independent | rect. | 13 | 17 |
| 8 | 98.95 | radiation | 1.0 | 90 | > th | dose independent | rect. | 13 | 6 |
| 18 | 99.67 | radiation | 1.0 | 90 | > th | dose independent | sin | 14 | NA |
| 22 | 99.94 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 23 | 100.75 | humidity | 90.0 | 90 | < th | dose independent | rect. | 13 | 5 |
| 25 | 101.14 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 29 | 101.58 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 30 | 101.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 32 | 101.61 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 34 | 101.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 35 | 101.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 3 |
| 36 | 101.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 3 |
| 38 | 101.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 41 | 101.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 21 |
| 42 | 101.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 21 |
| 43 | 101.98 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 13 | 5 |
| 44 | 101.98 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 13 | 5 |
| 46 | 102.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 49 | 102.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 21 |
| 51 | 102.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 55 | 102.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 68 | 102.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 19 |
| 69 | 102.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 83 | 103.18 | radiation | 40.0 | 30 | < th | dose independent | rect. | 13 | 6 |
| 86 | 103.25 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 87 | 103.25 | temperature | 15.0 | 90 | > th | dose independent | rect. | 18 | 19 |
| 90 | 103.41 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 91 | 103.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 96 | 103.46 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 19 |
| 104 | 103.53 | wind | 9.0 | 90 | < th | dose independent | rect. | 13 | 5 |
| 107 | 103.63 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 108 | 103.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 109 | 103.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 110 | 103.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 111 | 103.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 113 | 103.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 114 | 103.68 | radiation | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 116 | 103.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 124 | 103.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 128 | 103.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 130 | 103.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 138 | 104.14 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 13 | 5 |
| 150 | 104.44 | wind | 1.0 | 90 | > th | dose independent | rect. | 13 | 5 |
| 181 | 105.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 184 | 105.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 2 |
| 189 | 105.21 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 197 | 105.27 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 204 | 105.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 230 | 106.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 14 |
| 232 | 106.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 243 | 106.46 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 248 | 106.59 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 18 |
| 301 | 107.13 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 312 | 107.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 10 |
| 313 | 107.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 358 | 107.73 | wind | 1.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 359 | 107.73 | wind | 1.0 | 90 | > th | dose dependent | rect. | 13 | 6 |
| 380 | 108.10 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 13 | 5 |
| 400 | 108.27 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 6 |
| 403 | 108.27 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 406 | 108.27 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 434 | 108.78 | wind | 1.0 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 436 | 108.82 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 438 | 108.84 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 450 | 108.96 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 495 | 109.46 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 507 | 109.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 16 | 21 |
| 521 | 109.66 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 534 | 109.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 538 | 109.91 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 16 | 13 |
| 549 | 109.98 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 566 | 110.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 4 |
| 567 | 110.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 575 | 110.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 576 | 110.20 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 577 | 110.20 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 584 | 110.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 586 | 110.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 651 | 110.80 | humidity | 90.0 | 90 | < th | dose independent | rect. | 7 | 6 |
| 655 | 110.85 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 673 | 111.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 678 | 111.06 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 712 | 111.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 719 | 111.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 739 | 111.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 740 | 111.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 770 | 111.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 786 | 111.64 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 807 | 111.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 828 | 111.77 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 836 | 111.81 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 6 |
| 872 | 112.18 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 2 |
| 962 | 112.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 963 | 112.80 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 964 | 112.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 14 |
| 965 | 112.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 972 | 112.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 19 |