Os08g0363000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os08g0363000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.39 | 0.237 | 10.2 | 0.504 | 0.715 | 0.461 | 0.0916 | -0.18 | 0.236 | 17.7 | 20.51 | 965 | -- | -- |
| 25.5 | 0.235 | 10.2 | 0.51 | 0.712 | 0.489 | 0.0902 | -- | 0.232 | 17.7 | 20.5 | 967 | -- | -- |
| 25.41 | 0.235 | 10.2 | 0.503 | 0.715 | 0.462 | -- | -0.182 | 0.237 | 17.7 | 20.52 | 957 | -- | -- |
| 25.5 | 0.235 | 10.2 | 0.533 | 0.717 | 0.489 | -- | -- | 0.243 | 17.7 | 20.56 | 967 | -- | -- |
| 48.4 | 0.324 | 10.2 | 0.521 | -- | 0.575 | -- | 0.0389 | 0.22 | -- | 20.41 | 492 | -- | -- |
| 31.75 | 0.264 | 10.2 | 0.729 | 0.719 | -- | 0.147 | -- | 0.353 | 18 | -- | -- | -- | -- |
| 31.8 | 0.264 | 10.2 | 0.728 | 0.72 | -- | -- | -- | 0.353 | 18 | -- | -- | -- | -- |
| 48.41 | 0.324 | 10.2 | 0.513 | -- | 0.574 | -- | -- | 0.219 | -- | 20.4 | 494 | -- | -- |
| 29.82 | 0.254 | 10.2 | -- | 0.723 | 0.801 | -- | -- | 0.124 | 18 | 19.1 | 8160 | -- | -- |
| 58.64 | 0.358 | 10.2 | 0.707 | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
| 45.75 | 0.316 | 10.2 | -- | 0.709 | -- | -- | -- | 0.272 | 18.1 | -- | -- | -- | -- |
| 54.61 | 0.344 | 10.2 | -- | -- | 0.708 | -- | -- | 0.135 | -- | 20.4 | 537 | -- | -- |
| 71.81 | 0.396 | 10.2 | -- | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.97 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 20 |
| 16 | 25.51 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 21 |
| 20 | 25.57 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 21 |
| 22 | 25.58 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 25 | 25.60 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 32 | 25.65 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 34 | 25.67 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 45 | 25.71 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 22 |
| 55 | 25.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 64 | 25.77 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 21 |
| 65 | 25.78 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 70 | 25.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 71 | 25.79 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 14 |
| 84 | 25.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 92 | 25.83 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 23 |
| 93 | 25.84 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 108 | 25.85 | temperature | 20 | 720 | < th | dose independent | rect. | 15 | 16 |
| 115 | 25.86 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 14 |
| 128 | 25.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 137 | 25.90 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 151 | 25.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 172 | 25.93 | temperature | 20 | 720 | < th | dose independent | sin | 11 | NA |
| 206 | 25.95 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 23 |
| 208 | 25.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 209 | 25.96 | temperature | 20 | 720 | > th | dose independent | sin | 12 | NA |
| 389 | 26.10 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 410 | 26.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 14 |
| 413 | 26.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 812 | 26.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 866 | 26.34 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 889 | 26.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 967 | 26.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 999 | 26.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 14 |