Os07g0591300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galactose oxidase, central domain containing protein.
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Os07g0591300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Galactose oxidase, central domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.03 | 0.502 | 5.89 | -0.0639 | 0.6 | -1.53 | -1.24 | -0.64 | -0.681 | 15.6 | 21.8 | 855 | -- | -- |
| 114.92 | 0.499 | 5.87 | 0.0924 | 0.598 | -1.48 | -1.2 | -- | -0.647 | 15.7 | 21.91 | 847 | -- | -- |
| 118.02 | 0.506 | 5.88 | -0.0847 | 0.584 | -1.5 | -- | -0.526 | -0.681 | 15.2 | 22 | 852 | -- | -- |
| 118.72 | 0.507 | 5.87 | 0.0726 | 0.59 | -1.47 | -- | -- | -0.647 | 15.1 | 21.97 | 859 | -- | -- |
| 136.63 | 0.544 | 5.87 | -0.00917 | -- | -1.6 | -- | -0.406 | -0.649 | -- | 22 | 973 | -- | -- |
| 203 | 0.668 | 5.97 | -0.416 | 0.747 | -- | -0.728 | -- | -1.11 | 14.1 | -- | -- | -- | -- |
| 204.72 | 0.67 | 5.97 | -0.439 | 0.743 | -- | -- | -- | -1.11 | 13.7 | -- | -- | -- | -- |
| 137.22 | 0.546 | 5.86 | 0.109 | -- | -1.59 | -- | -- | -0.622 | -- | 21.98 | 973 | -- | -- |
| 118.85 | 0.508 | 5.87 | -- | 0.593 | -1.46 | -- | -- | -0.66 | 15.1 | 21.96 | 855 | -- | -- |
| 238.4 | 0.721 | 5.98 | -0.469 | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
| 209.79 | 0.678 | 5.96 | -- | 0.751 | -- | -- | -- | -1.06 | 13.7 | -- | -- | -- | -- |
| 137.51 | 0.546 | 5.87 | -- | -- | -1.57 | -- | -- | -0.641 | -- | 21.94 | 973 | -- | -- |
| 244.19 | 0.729 | 5.96 | -- | -- | -- | -- | -- | -1.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 3 | 117.15 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 60 | 118.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 108 | 119.97 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 120 | 120.46 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 122 | 120.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 128 | 120.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 170 | 121.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 184 | 122.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 9 |
| 271 | 124.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 275 | 125.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 313 | 126.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 321 | 126.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 322 | 126.40 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 350 | 126.71 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 565 | 128.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |