BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0484200 Os07g0484200|AK072662
(139 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF ... 287 1e-78
Os04g0555700 Similar to Actin-depolymerizing factor (ADF) 227 2e-60
Os02g0663800 Similar to Actin-depolymerizing factor (ADF) 225 8e-60
Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2) 201 2e-52
Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-... 185 1e-47
Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-... 175 1e-44
Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF ... 172 7e-44
AK105744 172 7e-44
Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-... 170 4e-43
Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-... 163 3e-41
Os03g0820500 Similar to WCOR719 160 4e-40
Os07g0297500 146 6e-36
>Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1)
Length = 139
Score = 287 bits (735), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL
Sbjct: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
Query: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE
Sbjct: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
Query: 121 IQATDPSEMSLDIIRARAH 139
IQATDPSEMSLDIIRARAH
Sbjct: 121 IQATDPSEMSLDIIRARAH 139
>Os04g0555700 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 227 bits (578), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 102/138 (73%), Positives = 122/138 (88%)
Query: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
MANSASG+AV DECK KFQELK++R FRFI FKID++ ++ V+RLGQ + Y+DF A++
Sbjct: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
Query: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
PA ECRYAV+D DFVTDENCQKSKIFF SWSPDT++ RSKMLYASSKDRF+RELDGIQ E
Sbjct: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 IQATDPSEMSLDIIRARA 138
+QATDPSEMS+DI++ARA
Sbjct: 121 LQATDPSEMSMDIVKARA 138
>Os02g0663800 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 225 bits (573), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 103/138 (74%), Positives = 121/138 (87%)
Query: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
M+NSASG+AV DECK KF ELK +R FRFIVFKI++K ++ V+RLGQ E Y+DF A L
Sbjct: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
Query: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
PADECRYAV+D DFVTDENCQKSKIFF SW+PDT+R RSKMLYASSKDRF+RELDGIQ E
Sbjct: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 IQATDPSEMSLDIIRARA 138
+QATDPSEMS+DI+++RA
Sbjct: 121 LQATDPSEMSMDIVKSRA 138
>Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2)
Length = 138
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 120/138 (86%)
Query: 2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP 61
AN+ASG+AV+DECK KF ELK +R +RFI++KID+K + VE++G+ Y+DFAA+LP
Sbjct: 1 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 60
Query: 62 ADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEI 121
A+ECRYA++D DFVT+ENCQKSKIFF +WSPDT+R RSKM+YASSKDRF+RELDGIQ E+
Sbjct: 61 ANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 120
Query: 122 QATDPSEMSLDIIRARAH 139
QATDP+E+ LD+IR RA+
Sbjct: 121 QATDPTEVGLDVIRGRAN 138
>Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 185 bits (469), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%)
Query: 2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP 61
AN++SG+ V ECK F EL+ ++ R+++FKIDDK E+ VE+ G + E ++DF +LP
Sbjct: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
Query: 62 ADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEI 121
+CRYA+YD DFVT+ENCQKSKIFF +WSP +R R+KMLYA+SK+RFRRELDG+ EI
Sbjct: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
Query: 122 QATDPSEMSLDIIRARAH 139
QATDPSE+ ++++R RAH
Sbjct: 128 QATDPSELDIELLRERAH 145
>Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 175 bits (443), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 108/138 (78%)
Query: 2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP 61
+N++SG+ V + + F EL+ ++ FR+++FKI++K ++ VE+ G T E Y+DF A+LP
Sbjct: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
Query: 62 ADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEI 121
++CRYA+YD DFVT EN QKSKIFF +WSP T+R R+KMLY++SKDR ++ELDG EI
Sbjct: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
Query: 122 QATDPSEMSLDIIRARAH 139
QATDP+E+ L+++R RAH
Sbjct: 128 QATDPTEVDLEVLRERAH 145
>Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3)
Length = 139
Score = 172 bits (436), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 106/138 (76%)
Query: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
MANS+SG+A++D+CK KF EL+++R RFI F +D+K EI V+++G YEDF ++L
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
P +CR+A+YD DF+T E+ KS+IF+ WSPD A+ RSKMLYASS +RF++EL+GIQ E
Sbjct: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
Query: 121 IQATDPSEMSLDIIRARA 138
+QATD E+SLD ++ R
Sbjct: 121 VQATDAGEISLDALKDRV 138
>AK105744
Length = 139
Score = 172 bits (436), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 106/138 (76%)
Query: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
MANS+SG+A++D+CK KF EL+++R RFI F +D+K EI V+++G YEDF ++L
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
P +CR+A+YD DF+T E+ KS+IF+ WSPD A+ RSKMLYASS +RF++EL+GIQ E
Sbjct: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
Query: 121 IQATDPSEMSLDIIRARA 138
+QATD E+SLD ++ R
Sbjct: 121 VQATDAGEISLDALKDRV 138
>Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 151
Score = 170 bits (430), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 104/138 (75%)
Query: 2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP 61
S + + V ++ K F ELK R+ R+++FKIDD+ EI VE+ G E Y+DF A+LP
Sbjct: 12 GGSPAWIEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP 71
Query: 62 ADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEI 121
AD+CRYAVYDLDFV+D+NC+KSKIFF SWSP +R R+K +YA S+++FR ELDG+ EI
Sbjct: 72 ADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEI 131
Query: 122 QATDPSEMSLDIIRARAH 139
QATDP +M L+++R RA+
Sbjct: 132 QATDPDDMDLEVLRGRAN 149
>Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5)
Length = 143
Score = 163 bits (413), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 99/136 (72%)
Query: 4 SASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLPAD 63
+ G+ V +EC+ F E+K ++ RF+V+KID+++ + V+++G EGYE+ A LP D
Sbjct: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
Query: 64 ECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQA 123
+CRYAV+D DFVT +NCQKSKIFF +WSP +R R+K+LYA+SK RR LDG+ E+QA
Sbjct: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
Query: 124 TDPSEMSLDIIRARAH 139
TD SEM D+IR RA
Sbjct: 128 TDSSEMGYDVIRGRAQ 143
>Os03g0820500 Similar to WCOR719
Length = 150
Score = 160 bits (404), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 103/146 (70%), Gaps = 11/146 (7%)
Query: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
MAN+ SG+AV++ECK +FQEL+ R RF+VFKIDD ++ V+R+G G+++ A+L
Sbjct: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
Query: 61 PADECRYAVYDLDFVTDE-----------NCQKSKIFFFSWSPDTARTRSKMLYASSKDR 109
PAD CRYAVYD DF + +SKIFF SWSP A RSKM+YASS +
Sbjct: 61 PADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
Query: 110 FRRELDGIQCEIQATDPSEMSLDIIR 135
F++ELDG+Q ++QATDPSE++LD+++
Sbjct: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
>Os07g0297500
Length = 169
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 97/138 (70%), Gaps = 4/138 (2%)
Query: 2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP 61
S + + V ++ K F EL R+ R+++FKIDD+ EI VE+ G E Y+DF A+LP
Sbjct: 34 GGSPAWIEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP 93
Query: 62 ADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEI 121
AD AVYDLDFV+D+NC+KSKIFF SWSP + R+K +YA +++FR ELDG+ EI
Sbjct: 94 AD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEI 149
Query: 122 QATDPSEMSLDIIRARAH 139
QATDP +M L+++R RA+
Sbjct: 150 QATDPDDMDLEVLRGRAN 167
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,153,095
Number of extensions: 143241
Number of successful extensions: 287
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 285
Number of HSP's successfully gapped: 12
Length of query: 139
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 49
Effective length of database: 12,336,541
Effective search space: 604490509
Effective search space used: 604490509
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 151 (62.8 bits)