BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0412100 Os07g0412100|AK102058
(608 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0412100 Similar to Granule-bound starch synthase Ib, c... 1195 0.0
Os06g0133000 Granule-bound starch synthase I, chloroplast p... 734 0.0
Os10g0437600 Similar to Starch synthase II, chloroplast pre... 298 9e-81
Os06g0229800 Similar to Starch synthase IIA 296 3e-80
Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (E... 293 4e-79
Os06g0160700 Similar to Starch synthase I, chloroplast prec... 277 2e-74
AK072339 244 2e-64
Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthas... 179 4e-45
Os05g0533600 Similar to Starch synthase IVa (Glycogen (Star... 169 8e-42
Os04g0624600 Similar to Starch synthase DULL1 (Fragment) 143 4e-34
>Os07g0412100 Similar to Granule-bound starch synthase Ib, chloroplast precursor
(EC 2.4.1.21) (Fragment)
Length = 608
Score = 1195 bits (3092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/608 (94%), Positives = 576/608 (94%)
Query: 1 MARTMGSTPTYCSYQTNGVGALKQSPHMQFQQSYNYGVRFLKRDTLSVRINKHMAKRIAT 60
MARTMGSTPTYCSYQTNGVGALKQSPHMQFQQSYNYGVRFLKRDTLSVRINKHMAKRIAT
Sbjct: 1 MARTMGSTPTYCSYQTNGVGALKQSPHMQFQQSYNYGVRFLKRDTLSVRINKHMAKRIAT 60
Query: 61 STGICTKPRRSHMPIVCSAGMTIIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTI 120
STGICTKPRRSHMPIVCSAGMTIIFIATECHPWCKT HRVMTI
Sbjct: 61 STGICTKPRRSHMPIVCSAGMTIIFIATECHPWCKTGGLGDVLGGLPPALAAMGHRVMTI 120
Query: 121 VPRYDQYKDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKL 180
VPRYDQYKDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKL
Sbjct: 121 VPRYDQYKDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKL 180
Query: 181 YGPTTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPC 240
YGPTTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPC
Sbjct: 181 YGPTTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPC 240
Query: 241 YLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVG 300
YLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVG
Sbjct: 241 YLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVG 300
Query: 301 RKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWN 360
RKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWN
Sbjct: 301 RKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWN 360
Query: 361 PATDQYISVKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAA 420
PATDQYISVKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAA
Sbjct: 361 PATDQYISVKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAA 420
Query: 421 IPEFVEGNVQIIVLGTGXXXXXXXXXXXXXXYPNNARGIAKFNVPLAHMMFAGADFIIVP 480
IPEFVEGNVQIIVLGTG YPNNARGIAKFNVPLAHMMFAGADFIIVP
Sbjct: 421 IPEFVEGNVQIIVLGTGKKKMEEELILLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVP 480
Query: 481 SRFEPCGLIQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVA 540
SRFEPCGLIQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVA
Sbjct: 481 SRFEPCGLIQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVA 540
Query: 541 STVKRALKQYNTPAFQEMVQNCMAQDLSWKGPAKKWEEVLLGLGVEGSQPGIEGEELAPL 600
STVKRALKQYNTPAFQEMVQNCMAQDLSWKGPAKKWEEVLLGLGVEGSQPGIEGEELAPL
Sbjct: 541 STVKRALKQYNTPAFQEMVQNCMAQDLSWKGPAKKWEEVLLGLGVEGSQPGIEGEELAPL 600
Query: 601 AKENVATP 608
AKENVATP
Sbjct: 601 AKENVATP 608
>Os06g0133000 Granule-bound starch synthase I, chloroplast precursor (EC
2.4.1.21)
Length = 609
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/530 (65%), Positives = 401/530 (75%), Gaps = 1/530 (0%)
Query: 79 AGMTIIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTIVPRYDQYKDAWDTNVLVE 138
AGM ++F+ E PW KT HRVM I PRYDQYKDAWDT+V+ E
Sbjct: 81 AGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAE 140
Query: 139 VNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQLRFCL 198
+ + DR E VRFFHCYKRGVDRVF+DHP FLEKVWGKTG K+YGP TG DY+DNQ+RF L
Sbjct: 141 IKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSL 200
Query: 199 LCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYVNAKVA 258
LC AALEAPR+LNLNN+ YF G YGE+VVFV NDWHTG L YLK+ YQ G+Y NAKVA
Sbjct: 201 LCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVA 260
Query: 259 FCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKINWMKAGITECDLVMT 318
FCIHNI+YQGRFA ED+ LNL + F SFDFIDG+ PV GRKINWMKAGI E D V+T
Sbjct: 261 FCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLT 320
Query: 319 VSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWNPATDQYISVKYDATTVTE 378
VSP+Y +EL SG +G ELD I+R + TGIVNGMDV EW+P+ D+YI+ KYDATT E
Sbjct: 321 VSPYYAEELISGIARGCELDNIMRLTGI-TGIVNGMDVSEWDPSKDKYITAKYDATTAIE 379
Query: 379 ARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGNVQIIVLGTGX 438
A+ALNKE LQAE GLPVD IPLI F+GRLEEQKG D++ AAIPE ++ +VQI++LGTG
Sbjct: 380 AKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK 439
Query: 439 XXXXXXXXXXXXXYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGLIQLQGMRYGV 498
YP R + KFN PLAH++ AGAD + VPSRFEPCGLIQLQGMRYG
Sbjct: 440 KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGT 499
Query: 499 VPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVASTVKRALKQYNTPAFQEM 558
C+STGGLVDTV EG TGFHMG +V+C+ V+P DV VA+T+KRA+K TPA++EM
Sbjct: 500 PCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 559
Query: 559 VQNCMAQDLSWKGPAKKWEEVLLGLGVEGSQPGIEGEELAPLAKENVATP 608
V+NCM QDLSWKGPAK WE VLLGLGV GS PGIEG+E+APLAKENVA P
Sbjct: 560 VRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 609
>Os10g0437600 Similar to Starch synthase II, chloroplast precursor (EC 2.4.1.21)
(SS II) (GBSSII) (Granule-bound starch synthase II)
Length = 749
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 271/585 (46%), Gaps = 48/585 (8%)
Query: 23 KQSPHMQFQQSYNYGVRFLKRDTLSVRINKHMAKRIATSTGICTKPRRSHMPIVCSAGMT 82
+Q P Q S+ + D S + ++ +R S + T+ + + + G +
Sbjct: 181 EQDPFGQRDSSFYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQS 240
Query: 83 -------------------IIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTIVPR 123
II +A EC PW KT HRVM +VP
Sbjct: 241 VAEGTSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPM 300
Query: 124 YDQYKDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGP 183
Y Y + + + V ++H Y GVD VF+D+P+F +
Sbjct: 301 YKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIF---------HHVEND 351
Query: 184 TTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLK 243
G D D R LLC AA+E P + Y G N+VF+ANDWHT +LP YLK
Sbjct: 352 IYGGDRTDILKRMVLLCKAAIEVPWYVPCGGYCYGDG----NLVFLANDWHTALLPVYLK 407
Query: 244 SIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKI 303
+ Y G + A+ IHNIA+QGR +DF L+LP ++ F D P G +
Sbjct: 408 AYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYD----PFGGDHL 463
Query: 304 NWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLE-TGIVNGMDVYEWNPA 362
N AGI D ++TVS Y EL + + G L GI+ + GIVNG+D +WNP
Sbjct: 464 NIFAAGIKAADRLLTVSHGYAWELKTA-EGGWGLHGIINESDWKFQGIVNGIDTTDWNPR 522
Query: 363 TDQYIS----VKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILI 418
D ++ Y TV + K LQ E+GLPV +P+I F+GRL+ QKG D++
Sbjct: 523 CDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIA 582
Query: 419 AAIPEFVEGNVQIIVLGTGXXXXXXXXXXXXXXYPNNARGIAKFNVPLAHMMFAGADFII 478
A+P +VQ+I+LGTG + + RG F++ LAH M AGAD ++
Sbjct: 583 EAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILL 642
Query: 479 VPSRFEPCGLIQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTA 538
+PSRFEPCGL QL M YG VP+ + GGL DTV+ GL T + +
Sbjct: 643 MPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGL----GWTFEKAEANR 698
Query: 539 VASTVKRALKQYNT--PAFQEMVQNCMAQDLSWKGPAKKWEEVLL 581
+ + L Y +++ + + M QDLSW AK +EEVLL
Sbjct: 699 LIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVLL 743
>Os06g0229800 Similar to Starch synthase IIA
Length = 810
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 260/527 (49%), Gaps = 53/527 (10%)
Query: 74 PIVCSAGMTIIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTIVPRYDQYKDAWDT 133
P+ M +I +A EC PWCKT HRVM +VPRY Y +A D
Sbjct: 312 PLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDV 371
Query: 134 NVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQ 193
+ + V++FH + GVD VF+D P+F + +YG + ++
Sbjct: 372 GIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQ-----DDIYG----GNRQEIM 422
Query: 194 LRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYV 253
R L C AA+E P + Y G N+VF+ANDWHT +LP YLK+ Y+ GM
Sbjct: 423 KRMILFCKAAVEVPWHVPCGGVPYGDG----NLVFLANDWHTALLPVYLKAYYRDNGMMQ 478
Query: 254 NAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKINWMKAGITEC 313
+ IHNIAYQGR ++F + LP+ +L F D PV G N AG+
Sbjct: 479 YTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDHFKLYD----PVGGEHANIFGAGLKMA 534
Query: 314 DLVMTVSPHYVKELASGPDKGVELDGILRTKPLE-TGIVNGMDVYEWNPATDQYIS---- 368
D V+TVSP Y+ EL + + G L I+R + GIVNG+D EWNP D ++
Sbjct: 535 DRVVTVSPGYLWELKT-TEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGY 593
Query: 369 VKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGN 428
Y ++ ++ K LQ E+GL V +PLI F+GRL+ QKG DI+ A+P +
Sbjct: 594 ANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQD 653
Query: 429 VQIIVLGTGXXXXXXXXXXXXXXYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGL 488
VQ+++LG+G + + RG F+V +AH + AGAD +++PSRFEPCGL
Sbjct: 654 VQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGL 713
Query: 489 IQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVASTVKRA-- 546
QL M YG VP+ + GGL DT+ DP + T + T RA
Sbjct: 714 NQLYAMAYGTVPVVHAVGGLRDTMS----------------AFDPFEDTGLGWTFDRAEP 757
Query: 547 ----------LKQYN--TPAFQEMVQNCMAQDLSWKGPAKKWEEVLL 581
L+ Y +++ + M+QDLSW A+ +EEVL+
Sbjct: 758 HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
>Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (EC 2.4.1.21)
Length = 677
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 257/515 (49%), Gaps = 29/515 (5%)
Query: 74 PIVCSAGMTIIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTIVPRYDQYKDAWDT 133
P+ M +I +A+EC P+CKT HRVM ++PRY +Y +A D
Sbjct: 179 PLAGPNVMNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEAKDL 238
Query: 134 NVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQ 193
V + + V +FH + GVD VF++ P F + + G + D
Sbjct: 239 GVRKRYRVAGQDSEVSYFHAFIDGVDFVFLEAPPFRHR---------HNDIYGGERFDVL 289
Query: 194 LRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYV 253
R L C AA+E P S Y G N+VF+ANDWHT +LP YLK+ Y+ G+
Sbjct: 290 KRMILFCKAAVEVPWFAPCGGSIYGDG----NLVFIANDWHTALLPVYLKAYYRDNGLMQ 345
Query: 254 NAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKINWMKAGITEC 313
+ IHNIA+QGR +DF ++LP+ ++ F D PV G N AG+
Sbjct: 346 YTRSVLVIHNIAHQGRGPVDDFATMDLPEHYIDHFRLYD----PVGGEHSNVFAAGLKMA 401
Query: 314 DLVMTVSPHYVKELASGPDKGVELDGILRTKPLE-TGIVNGMDVYEWNPATDQYIS---- 368
D +TVS Y+ E+ + D G L I+ + GIVNG+D+ EWNP D+++
Sbjct: 402 DRAVTVSHGYLWEIKT-MDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGY 460
Query: 369 VKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGN 428
Y T+ + KE LQ ++GL V +PLI F+GRL+ QKG DI+ A+P +
Sbjct: 461 ANYTFETLDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQD 520
Query: 429 VQIIVLGTGXXXXXXXXXXXXXXYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGL 488
VQ+++LGTG + + RG F+V LAH + AGAD +++PSRFEPCGL
Sbjct: 521 VQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGL 580
Query: 489 IQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVASTVKRALK 548
QL M YG VP+ + GGL DTV GL T D + + + L
Sbjct: 581 NQLYAMAYGTVPVVHAVGGLRDTVAPFDPFADTGL----GWTFDRAEANRMIDALGHCLN 636
Query: 549 QYNT--PAFQEMVQNCMAQDLSWKGPAKKWEEVLL 581
Y +++ + MAQDLSW A+ +E+VL+
Sbjct: 637 TYRNYKESWRGLQARGMAQDLSWDHAAELYEDVLV 671
>Os06g0160700 Similar to Starch synthase I, chloroplast precursor (EC 2.4.1.21)
(Soluble starch synthase 1) (SSS 1)
Length = 641
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 265/512 (51%), Gaps = 28/512 (5%)
Query: 82 TIIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTIVPRY------DQYKDAWDTNV 135
+++F+ E P+ K+ HRVM ++PRY + +A+ T
Sbjct: 134 SVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGALNKNFANAFYTEK 193
Query: 136 LVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQLR 195
+++ V FFH Y+ VD VFVDHP + LYG G + DNQ R
Sbjct: 194 HIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSYHRP------GNLYGDNFGA-FGDNQFR 246
Query: 196 FCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYVNA 255
+ LLC AA EAP +L L Y YG+ +FV NDWH ++P L + Y+ G+Y +A
Sbjct: 247 YTLLCYAACEAPLILELGG--YI---YGQKCMFVVNDWHASLVPVLLAAKYRPYGVYRDA 301
Query: 256 KVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPV----VGRKINWMKAGIT 311
+ IHN+A+QG + L LP + + +++ + G +N++K +
Sbjct: 302 RSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVV 361
Query: 312 ECDLVMTVSPHYVKELASGPDKGVELDGILRT-KPLETGIVNGMDVYEWNPATDQYISVK 370
D ++TVS Y E+ + + G L+ +L + K + GIVNG+D+ +WNP+TD+++
Sbjct: 362 TADRIVTVSQGYSWEVTTA-EGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYH 420
Query: 371 YDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGNVQ 430
Y ++ +A K LQ E+GLP+ +PLI F+GRL+ QKG D++ AIP+ + N+Q
Sbjct: 421 YSVDDLS-GKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQ 479
Query: 431 IIVLGTGXXXXXXXXXXXXXXYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGLIQ 490
++LG+G Y + RG F+VP++H + AG D +++PSRFEPCGL Q
Sbjct: 480 FVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQ 539
Query: 491 LQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVASTVKRALKQY 550
L M+YG VP+ TGGL DTV E F P+ + + ++ A+ Y
Sbjct: 540 LYAMQYGTVPVVHGTGGLRDTV-ENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTY 598
Query: 551 --NTPAFQEMVQNCMAQDLSWKGPAKKWEEVL 580
+ +++ +++ M+ D +W A ++E++
Sbjct: 599 REHKSSWEGLMKRGMSSDFTWDHAASQYEQIF 630
>AK072339
Length = 376
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 197/368 (53%), Gaps = 17/368 (4%)
Query: 222 YGE-NVVFVANDWHTGVLPCYLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNL 280
YG+ N+VF+ANDWHT +LP YLK+ Y G + A+ IHNIA+QGR +DF L+L
Sbjct: 12 YGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDL 71
Query: 281 PDSFLPSFDFIDGHFKPVVGRKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGI 340
P ++ F D P G +N AGI D ++TVS Y EL + + G L GI
Sbjct: 72 PVDYMDLFKLYD----PFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTA-EGGWGLHGI 126
Query: 341 LRTKPLE-TGIVNGMDVYEWNPATDQYIS----VKYDATTVTEARALNKEMLQAEVGLPV 395
+ + GIVNG+D +WNP D ++ Y TV + K LQ E+GLPV
Sbjct: 127 INESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPV 186
Query: 396 DSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGNVQIIVLGTGXXXXXXXXXXXXXXYPNN 455
+P+I F+GRL+ QKG D++ A+P +VQ+I+LGTG + +
Sbjct: 187 RGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDR 246
Query: 456 ARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGLIQLQGMRYGVVPICSSTGGLVDTVKEG 515
RG F++ LAH M AGAD +++PSRFEPCGL QL M YG VP+ + GGL DTV+
Sbjct: 247 VRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHY 306
Query: 516 VTGFHMGLFNVECETVDPVDVTAVASTVKRALKQYNT--PAFQEMVQNCMAQDLSWKGPA 573
GL T + + + + L Y +++ + + M QDLSW A
Sbjct: 307 NPYEESGL----GWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAA 362
Query: 574 KKWEEVLL 581
K +EEVLL
Sbjct: 363 KLYEEVLL 370
>Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 972
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 239/523 (45%), Gaps = 59/523 (11%)
Query: 78 SAGMTIIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTIVPRYDQYKDAWDTNV-L 136
S+G+ I+ IA E P K H V ++P+YD + TN+ +
Sbjct: 474 SSGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKV 533
Query: 137 VEVNIGDRTETVRFFHCYKRGVDR---VFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQ 193
++V I + F + G V+ P K + + + YG DD++
Sbjct: 534 LDVVIQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRA--QYYGEH--DDFK--- 586
Query: 194 LRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYV 253
R+ AALE Y SG + + +DW T + IY +G +
Sbjct: 587 -RYSYFSRAALELL---------YQSGKKID--IIHCHDWQTAFVAPLYWDIYATRG-FS 633
Query: 254 NAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKINWMKAGITEC 313
+A++ F HN YQG D L + D D GR IN K GI
Sbjct: 634 SARICFTCHNFEYQGTAPAPDLSYCGLD---VEQLDRPDRMQDNAHGR-INVAKGGIVYS 689
Query: 314 DLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWNPATDQYISVKYDA 373
++V TVSP Y E+ S +G++ + ++ GI+NG+D WNP+TD++++V+Y A
Sbjct: 690 NIVTTVSPTYALEVRSEGGRGLQDTLKMHSRKF-VGILNGIDTGTWNPSTDRFLAVQYSA 748
Query: 374 TTVTEARALNKEMLQAEVGL-PVDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGNVQII 432
T + + +A NK L+ ++GL D+S PL+ + RL QKG ++ AI + E Q +
Sbjct: 749 TDL-QGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFV 807
Query: 433 VLGTG---XXXXXXXXXXXXXXYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGLI 489
+LG+ NN R I K++ L+H ++A +D I+PS FEPCGL
Sbjct: 808 LLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLT 867
Query: 490 QLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPV-----------DVTA 538
Q+ MRYG VPI TGGL D+V F+ + ET+ PV D
Sbjct: 868 QMIAMRYGSVPIVRQTGGLCDSV-----------FDFDDETI-PVELRNGFTFARTDEQD 915
Query: 539 VASTVKRALKQYNTP--AFQEMVQNCMAQDLSWKGPAKKWEEV 579
++S ++RA Y+ ++++VQ M D SW PA ++E +
Sbjct: 916 LSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPASQYENL 958
>Os05g0533600 Similar to Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 915
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 152/522 (29%), Positives = 238/522 (45%), Gaps = 57/522 (10%)
Query: 78 SAGMTIIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTIVPRYDQYKDAWDTNV-L 136
S+G+ II IA E P K H V I+P+YD ++ N+ +
Sbjct: 419 SSGLHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQVNNLKV 478
Query: 137 VEVNIGDRTETVRFFHCYKRGVDR---VFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQ 193
++V + E F + G V+ P K + + + YG DD++
Sbjct: 479 LDVVVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRA--QYYGE--HDDFK--- 531
Query: 194 LRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTG-VLPCYLKSIYQAKGMY 252
RF AALE + +++ +DW T V P Y ++ Y G +
Sbjct: 532 -RFAYFSRAALEL----------LYQSQKKIDIIH-CHDWQTAFVAPLYWEA-YANLG-F 577
Query: 253 VNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKINWMKAGITE 312
+A++ F HN YQG +D L + D D GR IN +K I
Sbjct: 578 NSARICFTCHNFEYQGAAPAQDLACCGLD---VQQLDREDRMRDNSHGR-INVVKGAIVY 633
Query: 313 CDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWNPATDQYISVKYD 372
++V TVSP Y E+ S +G++ L ++ GI+NG+D WNP+TD+++ V+Y+
Sbjct: 634 SNIVTTVSPTYALEVRSEGGRGLQDSLKLHSRKF-VGILNGIDTDTWNPSTDRHLKVQYN 692
Query: 373 ATTVTEARALNKEMLQAEVGLP-VDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGNVQI 431
A + + +A NK L+ ++ L ++S PL+ + RL QKG ++ AI + E Q
Sbjct: 693 ANDL-QGKAANKAALRKQLNLSSTNASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQF 751
Query: 432 IVLGTGXXXXXXXXXXXXXXY---PNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGL 488
++LG+ + NN R + K++ L+H ++A +D IVPS FEPCGL
Sbjct: 752 VLLGSSPVPHIQREFEGIADHFQNNNNIRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGL 811
Query: 489 IQLQGMRYGVVPICSSTGGLVDTV---------KEGVTGFHMGLFNVECETVDPVDVTAV 539
Q+ MRYG VPI TGGL D+V KE GF V P D A+
Sbjct: 812 TQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPKELRNGFTF---------VHP-DEKAL 861
Query: 540 ASTVKRALKQYNTP--AFQEMVQNCMAQDLSWKGPAKKWEEV 579
+ ++RA YN ++++VQ M D SW A ++E++
Sbjct: 862 SGAMERAFNYYNRKPEVWKQLVQKDMRIDFSWASSASQYEDI 903
>Os04g0624600 Similar to Starch synthase DULL1 (Fragment)
Length = 1216
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 207/534 (38%), Gaps = 105/534 (19%)
Query: 72 HMPIVCSAG----MTIIFIATECHPWCKTXXXXXXXXXXXXXXXXXXHRVMTIVPRYDQY 127
H P+ S M I+ IA E P K H V I+P+YD
Sbjct: 755 HSPVTDSVAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYD-- 812
Query: 128 KDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFV------DHPM-FLEKVWGKTGPKL 180
L N+ D + + + G + V D P+ FLE + G
Sbjct: 813 -------CLNLSNVKD----LHYRQSFTWGNTEIKVWFGKVEDVPVYFLEP---QNGMFW 858
Query: 181 YGPTTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPC 240
G G R+++ RF C +ALE R + S P + +DW + +
Sbjct: 859 VGCVYG---RNDESRFGFFCHSALEFLR-------QNGSSP----DIIHCHDWSSAPVAW 904
Query: 241 YLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVG 300
K Y G+ N +V F IHN+ +F H +
Sbjct: 905 LFKEQYAQNGL-SNGRVVFTIHNL------------------------EFGAHHIGKAMA 939
Query: 301 RKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWN 360
R CD TVS Y +E++ GI NG+D W+
Sbjct: 940 R-----------CDKATTVSYTYSREVSGHGAIAPHFSKF-------HGIRNGIDPDIWD 981
Query: 361 PATDQYISVKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAA 420
P +D +I V Y + V E ++ K+ LQ +GL + P++ + RL QKG ++ A
Sbjct: 982 PYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQ-QTDTPVVGIISRLTVQKGIHLIKHA 1040
Query: 421 IPEFVEGNVQIIVLGTGXXXX-----XXXXXXXXXXYPNNARGIAKFNVPLAHMMFAGAD 475
I +E N Q+++LG+ Y + ++ PL+H+++AGAD
Sbjct: 1041 IYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGRVKLCLTYDEPLSHLIYAGAD 1100
Query: 476 FIIVPSRFEPCGLIQLQGMRYGVVPICSSTGGLVDTV--------KEGVTGFHMGLFNVE 527
FI+VPS FEPCGL QL MRYG +PI TGGL DTV + G F+ E
Sbjct: 1101 FILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYDTVFDVDDDKDRAREQGLEPNGFSFE 1160
Query: 528 CETVDPVDVTAVASTVKRALKQYNTPA--FQEMVQNCMAQDLSWKGPAKKWEEV 579
D V + RA+ + F + + M QD +W PA + E+
Sbjct: 1161 G-----ADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWNRPALDYMEL 1209
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,865,203
Number of extensions: 814823
Number of successful extensions: 1384
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1341
Number of HSP's successfully gapped: 10
Length of query: 608
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 501
Effective length of database: 11,448,903
Effective search space: 5735900403
Effective search space used: 5735900403
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)