BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0264100 Os07g0264100|AK065209
(374 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0264100 D-isomer specific 2-hydroxyacid dehydrogenase,... 718 0.0
Os07g0263400 466 e-131
Os04g0650800 Similar to Phosphoglycerate dehydrogenase 110 1e-24
Os04g0107500 D-isomer specific 2-hydroxyacid dehydrogenase,... 103 2e-22
Os04g0107200 D-isomer specific 2-hydroxyacid dehydrogenase,... 99 4e-21
Os01g0228600 Similar to 2-hydroxyacid dehydrogenase (AGR_L_... 98 1e-20
Os06g0486800 Similar to Formate dehydrogenase, mitochondria... 97 3e-20
Os06g0486900 Similar to Formate dehydrogenase, mitochondria... 96 4e-20
Os04g0107300 D-isomer specific 2-hydroxyacid dehydrogenase,... 93 4e-19
Os06g0655100 Similar to D-3-phosphoglycerate dehydrogenase,... 90 2e-18
AK108788 89 7e-18
Os04g0106400 D-isomer specific 2-hydroxyacid dehydrogenase,... 76 5e-14
>Os07g0264100 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
domain containing protein
Length = 374
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/374 (94%), Positives = 353/374 (94%)
Query: 1 MAAAARLVSTTXXXXXXXXXXXXXXXXXXXXXPRGFSSMADSIQRSGSGDITRVLFCGPY 60
MAAAARLVSTT PRGFSSMADSIQRSGSGDITRVLFCGPY
Sbjct: 1 MAAAARLVSTTLARSSSSLAAAARRPDLLASSPRGFSSMADSIQRSGSGDITRVLFCGPY 60
Query: 61 WPASTSFTKEYLQSYPFIQVDEVGLEEVPDVIQNYHLCVVKNRRLDSDTIAKASQMKIIM 120
WPASTSFTKEYLQSYPFIQVDEVGLEEVPDVIQNYHLCVVKNRRLDSDTIAKASQMKIIM
Sbjct: 61 WPASTSFTKEYLQSYPFIQVDEVGLEEVPDVIQNYHLCVVKNRRLDSDTIAKASQMKIIM 120
Query: 121 QYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQKVMDTAVKRK 180
QYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQKVMDTAVKRK
Sbjct: 121 QYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQKVMDTAVKRK 180
Query: 181 DLGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKRNWSSDTLPCDIDELVDK 240
DLGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKRNWSSDTLPCDIDELVDK
Sbjct: 181 DLGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKRNWSSDTLPCDIDELVDK 240
Query: 241 KGGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLVNIARGRLLDYDAVF 300
KGGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLVNIARGRLLDYDAVF
Sbjct: 241 KGGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLVNIARGRLLDYDAVF 300
Query: 301 NHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVIITPHIAGVTEYSYRTMAKVVGGVALK 360
NHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVIITPHIAGVTEYSYRTMAKVVGGVALK
Sbjct: 301 NHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVIITPHIAGVTEYSYRTMAKVVGGVALK 360
Query: 361 LHSGEPITEVEFVN 374
LHSGEPITEVEFVN
Sbjct: 361 LHSGEPITEVEFVN 374
>Os07g0263400
Length = 273
Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/277 (82%), Positives = 242/277 (87%), Gaps = 25/277 (9%)
Query: 79 QVDEVGLEEVPDVIQNYHLCVVKNRRLDSDTIAKASQMKIIMQYGVGLEGVDVNAATEHK 138
QVDEVGLEEVPDVIQNYHLC+VKNR +DSD IAKASQMK+IMQYGVG+EGVDVNAATEHK
Sbjct: 13 QVDEVGLEEVPDVIQNYHLCIVKNRLIDSDIIAKASQMKVIMQYGVGIEGVDVNAATEHK 72
Query: 139 IKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQKVMDTAVKRKDLGIPVGDTIFGKSVLIL 198
IKVARI GSTTGNAVSCAEMAIYLTLG+LRKQK+MDTAVKRKDLG PVGDTIFGK VLIL
Sbjct: 73 IKVARINGSTTGNAVSCAEMAIYLTLGILRKQKMMDTAVKRKDLGSPVGDTIFGKRVLIL 132
Query: 199 GFGAIGVEIAKRLRPFGVKILATKRNWSSDTLPCDIDELVDKKGGPEDMYEFAGEADIVI 258
GFGAIGVEIAKR+RPFGVKILATKRNWS++TLPCDIDELVDKKGGPEDMYEF GEADI
Sbjct: 133 GFGAIGVEIAKRIRPFGVKILATKRNWSAETLPCDIDELVDKKGGPEDMYEFTGEADI-- 190
Query: 259 TCLLLTNETVGIVDHKFLSAMKKGSYLVNIARGRLLDYDAVFNHLKSGHLGGLGIDVAWT 318
GSYLVNIARG +LDYDAVF+HLKSGHLGGLGIDVAWT
Sbjct: 191 -----------------------GSYLVNIARGHILDYDAVFDHLKSGHLGGLGIDVAWT 227
Query: 319 EPYDPEDPILKFSNVIITPHIAGVTEYSYRTMAKVVG 355
EPYDPEDPILKFSNVIITPH AGVTEYS+R AKV+G
Sbjct: 228 EPYDPEDPILKFSNVIITPHTAGVTEYSFRAAAKVIG 264
>Os04g0650800 Similar to Phosphoglycerate dehydrogenase
Length = 613
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 121/235 (51%), Gaps = 12/235 (5%)
Query: 111 AKASQMKIIMQYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQ 170
A +++++ + GVG++ VD+ AATEH V P T N V+ AE I L + R
Sbjct: 130 ASGGRLRVVGRAGVGIDNVDLAAATEHGCLVVNAP---TANTVAAAEHGIALLTAMSRNI 186
Query: 171 KVMDTAVK--RKDLGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKRNWSSD 228
D ++K + VG ++ GK++ ILGFG +G E+A+R + G+ ++A S+D
Sbjct: 187 AQADASLKAGKWQRNKYVGVSLVGKTIAILGFGKVGSEVARRAKGLGMHVIAHDPYASAD 246
Query: 229 TLPCDIDELVDKKGGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLVNI 288
ELV M + AD + + LT T +++ + + MKKG ++N+
Sbjct: 247 RAHAIGVELVS-------MEDALTTADFISLHMPLTPATNKMLNDETFAKMKKGVRIINV 299
Query: 289 ARGRLLDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVIITPHIAGVT 343
ARG ++D DA+ L SG + +DV EP P+ ++ NV +TPH+ T
Sbjct: 300 ARGGVIDEDALVRALDSGIVAQAALDVFTKEPPAPDSKLVLHENVTVTPHLGAST 354
>Os04g0107500 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
domain containing protein
Length = 316
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 30/274 (10%)
Query: 105 LDSDTIAKASQMKIIMQYGVGLEGVDVNAATEHKIKVARIPGSTTGN--AVSCAEMAIYL 162
+ +D +A+ +++I++ G++ +D++A I V + G A A+ A+ L
Sbjct: 58 VSADLVARLPKLEIVVATSTGVDHIDLDACRRRGISV-----TNAGEVFAPDVADYAVGL 112
Query: 163 TLGVLRKQKVMDTAVKR----KDLGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKI 218
+ VLR+ + ++R D P+ + GK V I+G G+IG +A+RL FG I
Sbjct: 113 VVAVLRRVAAAEAYLRRGRWAADGDYPLATKVSGKRVGIVGLGSIGGLVARRLAAFGCVI 172
Query: 219 LATKRNWSSDTLPCDIDELVDKKGGPEDMY----EFAGEADIVITCLLLTNETVGIVDHK 274
R+ K P Y E A E+D+++ LT ET +V +
Sbjct: 173 AYNSRS--------------PKASAPYKFYPSVRELAAESDVLVLSCALTEETRRMVGRE 218
Query: 275 FLSAMKKGSYLVNIARGRLLDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVI 334
+ A+ KG LVN+ RG L+D + L+ G LGG G+DV EP P + + NV+
Sbjct: 219 VMEALGKGGVLVNVGRGGLVDEAELVRCLREGVLGGAGLDVYENEPEVPPE-LWGMDNVV 277
Query: 335 ITPHIAGVTEYSYRTMAKVVGGVALKLHSGEPIT 368
++ H A +T S + + VV SG+P+
Sbjct: 278 LSDHRAVITPESIQGVVDVVKANLDAFFSGKPLV 311
>Os04g0107200 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
domain containing protein
Length = 329
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 122/261 (46%), Gaps = 26/261 (9%)
Query: 115 QMKIIMQYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQKVMD 174
+ ++ G G++ +D+ + VA G+ T + A+ A+ L + VLR+ D
Sbjct: 80 SLGCVVTTGAGVDHIDLAECARRGVAVA---GAGTVFSTDVADHAVGLLVDVLRRISASD 136
Query: 175 TAVKRKDLGI----PVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKR----NWS 226
V+R P+G + GK V I+G G+IG IAKRL+ FG I R + S
Sbjct: 137 RYVRRGLWAARGDYPLGSKLSGKHVGIIGLGSIGSLIAKRLQAFGCTISYNSRRPKDSVS 196
Query: 227 SDTLPCDIDELVDKKGGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLV 286
+ P D+ + A +D++I L +ET IVD L A+ K +V
Sbjct: 197 YNYFP--------------DVTDLAAASDVLIVACALNDETRHIVDSSVLEALGKDGVVV 242
Query: 287 NIARGRLLDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVIITPHIAGVTEYS 346
NIARG ++D + LK G + G G+DV EP P + +L NV++T H A T S
Sbjct: 243 NIARGGIVDEAELIRALKEGRIAGAGLDVFEKEPDVPAE-LLSMDNVVLTAHEAVFTTES 301
Query: 347 YRTMAKVVGGVALKLHSGEPI 367
+A ++ SG P+
Sbjct: 302 NWDLADLMIANLEAFFSGGPL 322
>Os01g0228600 Similar to 2-hydroxyacid dehydrogenase (AGR_L_379p)
Length = 316
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 128/273 (46%), Gaps = 30/273 (10%)
Query: 105 LDSDTIAKASQMKIIMQYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTL 164
+D+ I ++I+ + VG++ VD++A ++V P T + A++A+ L +
Sbjct: 59 VDAAMIDALPSLEIVSSFSVGIDRVDLDACLRRGVRVTNTPDVLTDD---VADLAVGLAI 115
Query: 165 GVLRKQKVMDTAV---KRKDLGIPVGDTIF-GKSVLILGFGAIGVEIAKRLRPFGVKILA 220
LRK D V K K G T F GK V I+G G IG+ +AKR+ F +
Sbjct: 116 AALRKIPQADRYVRAGKWKSKGDFTLTTRFSGKRVGIIGLGRIGLAVAKRVEAFDCPV-- 173
Query: 221 TKRNWSSDTLPCDIDELVDKKGGPEDMY-----EFAGEADIVITCLLLTNETVGIVDHKF 275
N+ T K+ P Y E A +D+++ L T IV+ +
Sbjct: 174 ---NYYQRT----------KQDHPGYTYYPSVVELAASSDVLVVACPLNEHTRHIVNREV 220
Query: 276 LSAMKKGSYLVNIARGRLLDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVII 335
+ A+ L+NI RG +D A+ L G LGG G+DV EP PE +L NV++
Sbjct: 221 MEALGPRGVLINIGRGPHVDEAAMVAALADGRLGGAGLDVFEDEPNVPE-ALLGMDNVVL 279
Query: 336 TPHIAGVTEYSYRTMAKVVGGVALKLH-SGEPI 367
PH+ T + MA +V G L+ H +G+P+
Sbjct: 280 VPHVGSATHETRTAMADLVLG-NLEAHVAGKPL 311
>Os06g0486800 Similar to Formate dehydrogenase, mitochondrial precursor (EC
1.2.1.2) (NAD- dependent formate dehydrogenase) (FDH)
Length = 376
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 144/290 (49%), Gaps = 27/290 (9%)
Query: 69 KEYLQS---YPFIQVDEVGLE-EVPDVIQNYHLCVVKNRR---LDSDTIAKASQMKIIMQ 121
+E+L+S + + D+ GL E+ I++ H+ + + ++ I KA +++++
Sbjct: 58 REWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVSAERIKKAKNLELLLT 117
Query: 122 YGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRK-----QKVMDTA 176
G+G + +D+ AA + VA + GS N VS AE + L +LR Q+V+
Sbjct: 118 AGIGSDHIDLPAAAAAGLTVAEVTGS---NTVSVAEDELMRILILLRNFLPGYQQVVHGE 174
Query: 177 VKRKDLGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKRNWSSDTLPCDIDE 236
+ D + GK+V +G G IG + +RL+PF +L R ID
Sbjct: 175 WNVAGIAYRAYD-LEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDR--------LKIDP 225
Query: 237 LVDKKGGP---EDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLVNIARGRL 293
++K+ G ED+ + D+++ LT +T G+ + + ++ MKKG +VN ARG +
Sbjct: 226 ELEKEIGAKYEEDLDAMLPKCDVIVINTPLTEKTRGMFNKERIAKMKKGVIIVNNARGAI 285
Query: 294 LDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVIITPHIAGVT 343
+D AV + SG + G G DV + +P + P N +TPHI+G T
Sbjct: 286 MDTQAVADACSSGQVAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTT 335
>Os06g0486900 Similar to Formate dehydrogenase, mitochondrial precursor (EC
1.2.1.2) (NAD- dependent formate dehydrogenase) (FDH)
Length = 378
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 20/247 (8%)
Query: 105 LDSDTIAKASQMKIIMQYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTL 164
+ ++ I KA +++++ GVG + +D+ AA + VA I GS N VS AE + L
Sbjct: 103 ITAERIKKAKNLELLLTAGVGSDHIDLPAAAAAGLTVAEITGS---NTVSVAEDQLMRIL 159
Query: 165 GVLRK-----QKVMDTAVKRKDLGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKIL 219
+LR ++++ + D + GK+V +G G IG + +RL+PF ++
Sbjct: 160 LLLRNFLPGHHQIVNGEWNVAGIAHRTYD-LEGKTVGTVGAGRIGRLLLQRLKPFNCNLM 218
Query: 220 ATKRNWSSDTLPCDIDELVDKKGGP---EDMYEFAGEADIVITCLLLTNETVGIVDHKFL 276
R ID ++K+ G ED+ + D+V+ + LT +T G+ + + +
Sbjct: 219 YHDR--------VKIDPELEKEIGAKYEEDLDAMLPKCDVVVINMPLTEKTRGMFNKERI 270
Query: 277 SAMKKGSYLVNIARGRLLDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVIIT 336
+ MKKG +VN ARG ++D AV + SGH+ G G DV + +P + P N +T
Sbjct: 271 AKMKKGVTIVNNARGAIMDTQAVADACASGHVAGYGGDVWFPQPAPKDHPWRYMPNHAMT 330
Query: 337 PHIAGVT 343
PH +G T
Sbjct: 331 PHCSGTT 337
>Os04g0107300 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
domain containing protein
Length = 326
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 115 QMKIIMQYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQKVMD 174
++ I+ G +D+ ++VA G + + A+ A+ L L VLR D
Sbjct: 73 SLRCIITVSAGTNHIDLRECARRGVQVANAGGIYSTDV---ADYAVGLLLDVLRHVSAGD 129
Query: 175 TAVKR----KDLG---IPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKRNWSS 227
V+R + G +P+G I G+ V I+G G+IG IA+RL FG + R
Sbjct: 130 RFVRRGLCPEQRGGDFLPLGSKIGGRRVGIIGLGSIGSAIARRLEAFGCVVSYHNRRRRE 189
Query: 228 DTLPCDIDELVDKKGGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLVN 287
D D A +D+++ LT ET IVD L A+ + +VN
Sbjct: 190 DVAYAYFPTATD----------LAASSDVLVVACALTAETRRIVDRGVLDALGERGVVVN 239
Query: 288 IARGRLLDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNVIITPHIAGVTEYSY 347
+ARG +D + L G + G G++V EP P + + NV++TPH A T S
Sbjct: 240 VARGANVDEAELVRALAEGRVAGAGLEVFDDEPNVPPE-LWAMDNVVLTPHQAIFTPESM 298
Query: 348 RTMAKVVGGVALKLHSGEP-ITEVE 371
+++VV +GEP +T VE
Sbjct: 299 ADLSRVVLANLDAFFAGEPLLTRVE 323
>Os06g0655100 Similar to D-3-phosphoglycerate dehydrogenase, chloroplast
precursor (EC 1.1.1.95) (3-PGDH)
Length = 629
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 28/273 (10%)
Query: 111 AKASQMKIIMQYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQ 170
A +++++ + GVG++ VD+ AATE V P T N V+ AE AI L + R
Sbjct: 130 AARGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAP---TANTVAAAEHAIALLAAMARNV 186
Query: 171 KVMDTAVK--RKDLGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKRNWSSD 228
D ++K + VG ++ GK++ I+GFG +G E+A+R + G+ I++ D
Sbjct: 187 AQADASLKAGKWQRNKYVGVSLVGKTLAIMGFGKVGSEVARRAKGLGMDIISHDPYAPVD 246
Query: 229 TLPCDIDELVDKKGGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLVNI 288
+LV E AD + + LT T + D + + MKKG ++N+
Sbjct: 247 RARAIGVDLVS-------FDEAISTADFISLHMPLTPSTAKLFDDETFANMKKGVRIINV 299
Query: 289 ARGRLLDYDAVFNHLKSGHLGGL----------------GIDVAWTEPYDPEDPILKFSN 332
ARG ++D DA+ L +G + +DV EP + ++ +
Sbjct: 300 ARGGVVDEDALLRALDNGTVSQCVLIKGCFSLFPDCFEAALDVFTEEPPPKDSKLVHHEH 359
Query: 333 VIITPHIAGVTEYSYRTMAKVVGGVALKLHSGE 365
V +TPH+ T + +A + L GE
Sbjct: 360 VTVTPHLGASTSEAQEGVALEIAEAVLGALKGE 392
>AK108788
Length = 411
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 27/256 (10%)
Query: 105 LDSDTIAKASQMKIIMQYGVGLEGVDVNAATEHK--IKVARIPGSTTGNAVSCAEMAIYL 162
L ++ + K +KI + G+G + VD+N A E I VA + GS N VS AE +
Sbjct: 118 LTAERLKKCKNLKIAVTAGIGSDHVDLNVANETNGGITVAEVTGS---NVVSVAEHVVMT 174
Query: 163 TLGVLRKQKVMDTAVKRKDLGIPVGDT----IFGKSVLILGFGAIGVEIAKRLRPFGVKI 218
L ++R + R D + + GK V + G IG + +RL+PF K
Sbjct: 175 ILTLVRNFGPAREQIARGDWDVAEAAKNEFDLEGKVVGTVAVGRIGERVLRRLKPFDCKE 234
Query: 219 LATKRNWSSDTLPCDIDELVDKKGGP---EDMYEFAGEADIVITCLLLTNETVGIVDHKF 275
L D P ++ +K+ G E++ E + D+V L +T G+ + +
Sbjct: 235 LLY-----FDYQPLSAEK--EKEIGCRRVENLEEMLAQCDVVTINCPLHEKTRGLFNKEL 287
Query: 276 LSAMKKGSYLVNIARGRLLDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDPILKFSNV-- 333
+S MK GS+LVN ARG ++ + V + LKSG L G G DV + +P + P+ S +
Sbjct: 288 ISKMKPGSWLVNTARGAIVVKEDVADALKSGQLRGYGGDVWFPQPAPKDHPLRTASYLGW 347
Query: 334 ------IITPHIAGVT 343
PH++G +
Sbjct: 348 GGSAGNATVPHMSGTS 363
>Os04g0106400 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
domain containing protein
Length = 329
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 20/242 (8%)
Query: 104 RLDSDTIAKASQMKIIMQYGVGLEGVDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLT 163
R D+ ++ ++ G++ +D+ + VA S T + A+ A+ +
Sbjct: 69 RADAALFDAVPSLRCVVSTAAGVDHIDLAECARRGVVVA---NSGTVYSGDVADHAVGMV 125
Query: 164 LGVLRKQKVMDTAVKRKDLGI----PVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKIL 219
+ V+R+ + V+R + P+G + GK V I+G G IG IAKRL FG I
Sbjct: 126 IDVMRRVSAAERYVRRGLWPVQGDYPLGSKVSGKRVGIIGLGNIGSLIAKRLEAFGCVIS 185
Query: 220 ATKRNWSSDTLPCDIDELVDKKGGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAM 279
RN +LP D+ A ++D+++ L +ET IV + L A+
Sbjct: 186 YNSRN-PKRSLPYTYY---------ADVRALAADSDVLVVSCALNSETRHIVGGEVLDAL 235
Query: 280 KKGSYLVNIARGRLLDYDAVFNHLKSGHLGGLGIDVAWTEP-YDPEDPILKFSNVIITPH 338
+G +VN+ RG +D A+ L+ G + G G+DV EP PE + + NV++TPH
Sbjct: 236 GEGGVVVNVGRGANVDEAALVRALREGRIAGAGLDVFEGEPKVSPE--LREMENVVLTPH 293
Query: 339 IA 340
+A
Sbjct: 294 VA 295
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,474,155
Number of extensions: 466146
Number of successful extensions: 958
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 935
Number of HSP's successfully gapped: 12
Length of query: 374
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 272
Effective length of database: 11,709,973
Effective search space: 3185112656
Effective search space used: 3185112656
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)