BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0190600 Os07g0190600|AK070975
(186 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0190600 Similar to Helicase 359 e-100
Os08g0333300 93 1e-19
Os11g0625600 93 1e-19
Os11g0243100 93 1e-19
Os07g0651500 Protein of unknown function DUF889, eukaryote ... 92 2e-19
Os11g0630100 90 9e-19
Os11g0671400 90 1e-18
Os05g0111600 90 1e-18
Os02g0295300 89 1e-18
Os01g0244200 Triosephosphate isomerase family protein 89 1e-18
Os04g0300175 Protein of unknown function DUF889, eukaryote ... 89 2e-18
Os08g0448900 Protein of unknown function DUF889, eukaryote ... 89 2e-18
Os05g0523000 89 2e-18
Os12g0539300 89 3e-18
Os07g0418100 Protein of unknown function DUF889, eukaryote ... 87 5e-18
Os10g0457948 85 4e-17
Os01g0383200 84 8e-17
Os07g0113000 Protein of unknown function DUF889, eukaryote ... 82 2e-16
Os12g0267048 80 1e-15
Os01g0266200 Conserved hypothetical protein 78 3e-15
Os04g0362550 75 4e-14
Os10g0502800 74 4e-14
Os02g0701833 Protein of unknown function DUF889, eukaryote ... 73 9e-14
Os01g0300400 Protein of unknown function DUF889, eukaryote ... 72 2e-13
Os06g0554400 70 6e-13
Os01g0632900 70 6e-13
Os02g0463700 Similar to Helicase-like protein [Oryza sativa... 68 4e-12
Os02g0480100 Similar to Helicase-like protein [Oryza sativa... 66 1e-11
Os10g0186600 65 2e-11
Os10g0192300 Protein of unknown function DUF889, eukaryote ... 65 3e-11
Os01g0556600 Protein of unknown function DUF889, eukaryote ... 64 7e-11
>Os07g0190600 Similar to Helicase
Length = 186
Score = 359 bits (921), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/186 (93%), Positives = 174/186 (93%)
Query: 1 MDSTPPTGRKRKRASGKQAILXXXXXXXXXXXXIRERQQRWRSIIKAKKGNCSSELKKNT 60
MDSTPPTGRKRKRASGKQAIL IRERQQRWRSIIKAKKGNCSSELKKNT
Sbjct: 1 MDSTPPTGRKRKRASGKQAILTTGVSSHSTGGTIRERQQRWRSIIKAKKGNCSSELKKNT 60
Query: 61 VSKQQVPVAIADEISYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKP 120
VSKQQVPVAIADEISYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKP
Sbjct: 61 VSKQQVPVAIADEISYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKP 120
Query: 121 EDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGV 180
EDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGV
Sbjct: 121 EDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGV 180
Query: 181 QSAITN 186
QSAITN
Sbjct: 181 QSAITN 186
>Os08g0333300
Length = 2183
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 77 YGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVD 136
YGPP Y W QE IRF GQ+P DR DI+ RVF +KV+
Sbjct: 544 YGPPDLFVTYTCNSKW-QEIADA--------IRF----EPGQQPSDRADIIVRVFNMKVN 590
Query: 137 ELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
E ++ +++G FGK AVLYT+EFQKRGLPH+H LVWL A+ SA
Sbjct: 591 EFITDIREGRTFGKVLAVLYTVEFQKRGLPHIHCLVWLAAATADVSA 637
>Os11g0625600
Length = 2171
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 77 YGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVD 136
YGPP Y W QE IRF GQ+P DR DI+ RVF +KV+
Sbjct: 537 YGPPDLFVTYTCNSKW-QEIADA--------IRF----EPGQQPSDRADIIVRVFNMKVN 583
Query: 137 ELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
E ++ +++G FGK AVLYT+EFQKRGLPH+H LVWL A+ SA
Sbjct: 584 EFITDIREGRTFGKVLAVLYTVEFQKRGLPHIHCLVWLAAATADVSA 630
>Os11g0243100
Length = 2171
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 77 YGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVD 136
YGPP Y W QE IRF GQ+P DR DI+ RVF +KV+
Sbjct: 537 YGPPDLFVTYTCNSKW-QEIADA--------IRF----EPGQQPSDRADIIVRVFNMKVN 583
Query: 137 ELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
E ++ +++G FGK AVLYT+EFQKRGLPH+H LVWL A+ SA
Sbjct: 584 EFITDIREGRTFGKVLAVLYTVEFQKRGLPHIHCLVWLAAATADVSA 630
>Os07g0651500 Protein of unknown function DUF889, eukaryote family protein
Length = 2021
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 77 YGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVD 136
YGPP Y W QE IRF GQ+P DR DI+ RVF +KV+
Sbjct: 581 YGPPDLFVTYTCHSKW-QEIADA--------IRF----EPGQQPSDRADIIVRVFNMKVN 627
Query: 137 ELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
E ++ +++G FGK AVLYT+EFQKRGLPH+H LVWL A+ SA
Sbjct: 628 EFITDIREGRTFGKVLAVLYTVEFQKRGLPHIHCLVWLAAATADVSA 674
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 75 SYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQ 118
SYYGPP + C YCGA FWYQERVK + + + I ++LCC+GG+
Sbjct: 190 SYYGPPTYECPYCGAMFWYQERVKSASAISKRKIIYNLCCKGGR 233
>Os11g0630100
Length = 1682
Score = 89.7 bits (221), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 21/157 (13%)
Query: 45 IKAKKGNCSSEL--------KKNTVSKQQVPVAIADEISYYGPPAH----------VCRY 86
I+ +GN +EL ++ +QV I S+ G P + +CR+
Sbjct: 612 IRKHQGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSFTGSPRYKAQNYQDAMAICRW 671
Query: 87 CGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVLKKGT 146
G + V + ++ I+ L G QKP DRPDIV RVF +K+ EL++ +K
Sbjct: 672 AGYPDLF---VTFTCNAAWPEIQNMLDEIGVQKPSDRPDIVDRVFHIKLRELMTDIKDKQ 728
Query: 147 YFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
YFGK A++YTIEFQKRGLPH HIL++L D A
Sbjct: 729 YFGKTLAIIYTIEFQKRGLPHAHILIFLDKKDKCPDA 765
>Os11g0671400
Length = 1682
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 21/157 (13%)
Query: 45 IKAKKGNCSSEL--------KKNTVSKQQVPVAIADEISYYGPPAH----------VCRY 86
I+ +GN +EL ++ +QV I S+ G P + +CR+
Sbjct: 612 IRKHQGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSFTGSPRYKAQNYQDAMAICRW 671
Query: 87 CGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVLKKGT 146
G + V + ++ I+ L G QKP DRPDIV RVF +K+ EL++ +K
Sbjct: 672 AGYPDLF---VTFTCNAAWPEIQNMLDEIGVQKPSDRPDIVDRVFHIKLRELMTDIKDKQ 728
Query: 147 YFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
YFGK A++YTIEFQKRGLPH HIL++L D A
Sbjct: 729 YFGKTLAIIYTIEFQKRGLPHAHILIFLDKKDKCPDA 765
>Os05g0111600
Length = 1525
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 21/157 (13%)
Query: 45 IKAKKGNCSSEL--------KKNTVSKQQVPVAIADEISYYGPPAH----------VCRY 86
I+ +GN +EL ++ +QV I S+ G P + +CR+
Sbjct: 455 IRKHQGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSFTGSPRYKAQNYQDAMAICRW 514
Query: 87 CGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVLKKGT 146
G + V + ++ I+ L G QKP DRPDIV RVF +K+ EL++ +K
Sbjct: 515 AGYPDLF---VTFTCNAAWPEIQNMLDEIGVQKPSDRPDIVDRVFHIKLRELMTDIKDKQ 571
Query: 147 YFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
YFGK A++YTIEFQKRGLPH HIL++L D A
Sbjct: 572 YFGKTLAIIYTIEFQKRGLPHAHILIFLDKKDKCPDA 608
>Os02g0295300
Length = 2169
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 74 ISYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKL 133
+ Y +CR GA + V + +S I L GQ P DR D++ RVF +
Sbjct: 115 VQNYQDAMAICRVFGAPDLF---VTFTCNSKWQEIYDALLFEPGQVPSDRSDMIVRVFNM 171
Query: 134 KVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQAS 177
KVDE +S +K+G FG AVLYT+EFQKRG PH+H L+WL AS
Sbjct: 172 KVDEFISDIKEGKTFGPVLAVLYTVEFQKRGPPHIHCLIWLAAS 215
>Os01g0244200 Triosephosphate isomerase family protein
Length = 2498
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 83 VCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVL 142
VCR G+ + V + +S I L GQ P DR D++ RVF +KVDE +S +
Sbjct: 605 VCRVFGSPDLF---VTFTCNSKWQEIYDALVFEPGQVPSDRSDMIVRVFSMKVDEFISDI 661
Query: 143 KKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
K+G FG AVLYT+EFQKRGLPH+H +VW A+D SA
Sbjct: 662 KEGRTFGPVLAVLYTVEFQKRGLPHIHCIVWRAAADAEFSA 702
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 69 AIADEISYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQ--KPEDR--P 124
A+ E SYYG P+H C YCGA FWYQERVKR + Q I ++LCCRGG+ PE + P
Sbjct: 210 ALCPERSYYGGPSHECPYCGAVFWYQERVKRDSAVSQRRIVYNLCCRGGKISLPELKYPP 269
Query: 125 DIVSRVFKLKVD 136
D+++++ K D
Sbjct: 270 DMLAKLLKFDGD 281
>Os04g0300175 Protein of unknown function DUF889, eukaryote family protein
Length = 1718
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 77 YGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVD 136
Y +CR G+ + V + +S I L GQ P DR D++ RVF +KVD
Sbjct: 613 YQDAMAICRVLGSPDLF---VTFTCNSKWQEIYDALLFEPGQVPSDRADMIVRVFNMKVD 669
Query: 137 ELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDG 179
E +S +K+G FG AVLYT+EFQKRGLPH+H LVWL A +
Sbjct: 670 EFISDIKEGHTFGPVLAVLYTVEFQKRGLPHIHCLVWLAARNA 712
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 73 EISYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQ--KPEDR--PDIVS 128
E SYYG P H C YCGA FWYQERVK+S + + ++LCC+GG+ PE + P ++
Sbjct: 227 ERSYYGGPTHECPYCGAVFWYQERVKKSSLVSKRKVVYNLCCKGGRIDLPELKHPPSFLA 286
Query: 129 RVFKLKVD 136
++ K D
Sbjct: 287 KLLKFDGD 294
>Os08g0448900 Protein of unknown function DUF889, eukaryote family protein
Length = 1740
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 48/58 (82%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWL 174
GQKP DR DIV+RVFK+K++ L+ +KK +FG AV+YTIEFQKRGLPHVHI++WL
Sbjct: 392 GQKPSDRADIVNRVFKMKLNILIDDIKKREFFGPINAVIYTIEFQKRGLPHVHIIIWL 449
>Os05g0523000
Length = 1634
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%)
Query: 116 GGQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQ 175
G QKP DRPDIV RVF +K+ EL++ +K YFGK A++YTIEFQKRGLPH HIL++L
Sbjct: 650 GVQKPSDRPDIVDRVFHIKLRELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHILIFLD 709
Query: 176 ASDGVQSA 183
D A
Sbjct: 710 KKDKCPDA 717
>Os12g0539300
Length = 1822
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Query: 108 IRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPH 167
IRF GQ+P DRPD++ RVF +KV E ++ +++G FG AVLY +EFQKRGLPH
Sbjct: 585 IRF----EDGQQPSDRPDMIVRVFNMKVHEFITDIREGRTFGPVLAVLYMVEFQKRGLPH 640
Query: 168 VHILVWLQASDGVQSA 183
+H LVWL A++ SA
Sbjct: 641 IHCLVWLAANNAEVSA 656
>Os07g0418100 Protein of unknown function DUF889, eukaryote family protein
Length = 2266
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 83 VCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVL 142
+CR G+ + V + +S I L GQ P DR D++ RVF +KV+E ++ +
Sbjct: 526 ICRVFGSPDLF---VTFTCNSKWQEIYDALLFEPGQLPSDRSDMIVRVFNMKVNEFIADI 582
Query: 143 KKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
++G FG AVLYT+EFQKRGLPH+H LVWL A + SA
Sbjct: 583 REGKTFGPVLAVLYTVEFQKRGLPHIHCLVWLAAENAEFSA 623
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 69 AIADEISYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQ--KPEDR--P 124
A+ E SYYG P+H C YCGA FWYQERVK+ Q I ++LCCRGG+ PE + P
Sbjct: 215 ALYPERSYYGGPSHECPYCGAVFWYQERVKKGTVLSQRKIVYNLCCRGGKISLPELKHPP 274
Query: 125 DIVSRVFKL 133
+++ + K
Sbjct: 275 SLLAELLKF 283
>Os10g0457948
Length = 557
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 50 GNCSSELKKNTVSKQQVPVAIADEISYYGPPAH----------VCRYCGAQFWYQERVKR 99
G L++ +QV I S+ G P + +CR+ G + V
Sbjct: 259 GGLQDALRRGDTRTEQVGRRIVLPASFTGGPRNKEQNYQDAMAICRWAGHPDLF---VTF 315
Query: 100 SYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIE 159
+ + I+ L G QKP +RPDI+ RVF +K+ EL+S +K+ +FGK +A+++TIE
Sbjct: 316 TCNPKWPEIQCMLDKVGYQKPSERPDILVRVFMIKLKELMSDIKRNQHFGKTKAIVFTIE 375
Query: 160 FQKRGLPHVHILVWL 174
FQKRGLPH HIL++L
Sbjct: 376 FQKRGLPHAHILIFL 390
>Os01g0383200
Length = 1741
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 83 VCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVL 142
+CR G+ + + V + +S I + GQ+ DR D++ RVF +KV++ ++ +
Sbjct: 631 ICRVYGSPYLF---VTFTCNSKWQEIAEAIRFEPGQQSSDRADVIVRVFNMKVNDFITDI 687
Query: 143 KKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
++G FGK AVLYT+EFQKR LPH+H LVWL AS SA
Sbjct: 688 REGRTFGKFLAVLYTVEFQKRELPHIHCLVWLAASTADISA 728
>Os07g0113000 Protein of unknown function DUF889, eukaryote family protein
Length = 1790
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 108 IRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPH 167
IRF GQ+P DR D++ RVF +KV + ++ +++G FG AVLYT+EFQKRGLPH
Sbjct: 354 IRFE----DGQQPSDRVDMIVRVFNMKVHDFITDIREGRTFGSVLAVLYTVEFQKRGLPH 409
Query: 168 VHILVWL 174
+H LVWL
Sbjct: 410 IHCLVWL 416
>Os12g0267048
Length = 385
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHIL 171
GQKPEDRPDIVSRVFKLKVDELVS+LKKGTYFGKARAV F L + HI+
Sbjct: 324 GQKPEDRPDIVSRVFKLKVDELVSLLKKGTYFGKARAVKEEKIFALTMLYYAHII 378
>Os01g0266200 Conserved hypothetical protein
Length = 463
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQA 176
GQ DRPDI++RVF +K+ + + K +FG AV+YTIEFQKRGLPHVHI++WL
Sbjct: 232 GQHSADRPDIINRVFHVKLHLFMDDIVKKKFFGPVTAVVYTIEFQKRGLPHVHIILWLDK 291
Query: 177 SDGVQSA 183
S + A
Sbjct: 292 SGPLTPA 298
>Os04g0362550
Length = 1410
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 83 VCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKVDELVSVL 142
+CR GA + V + +S I L GQ P DR D++ RVF ++E +S +
Sbjct: 3 ICRVLGAPDLF---VTFTCNSKWQEIYDALIYEPGQVPSDRSDMIVRVFN--INEFISDI 57
Query: 143 KKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQASDGVQSA 183
++G FG AVLYT+EFQK GLPH+H +VWL A + SA
Sbjct: 58 REGNTFGPILAVLYTVEFQKCGLPHIHCIVWLAAQNANFSA 98
>Os10g0502800
Length = 1077
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 69 AIADEISYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGGQ--KPEDR--P 124
A+ E SYYG P+H C YCGA FWYQERVKR + Q I ++LCCRGG+ PE + P
Sbjct: 198 ALCPERSYYGGPSHECPYCGAVFWYQERVKRDSAVSQRRIVYNLCCRGGKISLPELKYPP 257
Query: 125 DIVSRVFKLKVD 136
D+++++ K D
Sbjct: 258 DMLAKLLKFDGD 269
>Os02g0701833 Protein of unknown function DUF889, eukaryote family protein
Length = 1582
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 48/61 (78%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQA 176
GQ+P+DRPD+V+RVF+ K+ +++ ++ K YFG+ +A + EFQKRGLPH HIL+ +++
Sbjct: 715 GQQPQDRPDLVARVFRAKLRDVLDLIVKKKYFGEVQAYAHVTEFQKRGLPHEHILLIMKS 774
Query: 177 S 177
S
Sbjct: 775 S 775
>Os01g0300400 Protein of unknown function DUF889, eukaryote family protein
Length = 1202
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 41/58 (70%)
Query: 118 QKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQ 175
Q DR DIV RVF++K+ + + K +FG V+YTIEFQKRGLPHVHI+VWL+
Sbjct: 495 QHSSDRLDIVDRVFQMKLRIFIDDITKYQFFGPISGVVYTIEFQKRGLPHVHIIVWLE 552
>Os06g0554400
Length = 853
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 77 YGPPAHVCRYCGAQF-WYQERVKRSYSSDQGHIRFHLCCRGGQKPEDRPDIVSRVFKLKV 135
Y P ++ + A+ W+ + K +++ I L GQ P+DRPD++ RVFK K+
Sbjct: 423 YDPLSYPLFFPRAELIWHTDIPKNGVNTEDEEITREL--EKGQTPQDRPDLIVRVFKAKL 480
Query: 136 DELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQ 175
+E+ + L + + G +A Y +EFQKRGLPH H L+ +
Sbjct: 481 EEMKTQLVEKSILGIVKAYTYVVEFQKRGLPHAHFLLIMN 520
>Os01g0632900
Length = 2198
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQA 176
GQ+P+DRPD+V+RVF+ K+ +++ + K Y+G+ +A + EFQKRGLPH HIL+ ++
Sbjct: 740 GQQPQDRPDLVARVFRAKLRDMLDLFTKKKYYGEVQAYAHVTEFQKRGLPHEHILLIMKP 799
Query: 177 SDGVQSAITN 186
S +TN
Sbjct: 800 G----SKLTN 805
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQA 176
GQ+P+DRPD+V+RVF+ K+ +++ + K Y+G+ +A + EFQKRGLPH HIL+ ++
Sbjct: 1002 GQQPQDRPDLVARVFRAKLRDMLDLFTKKKYYGEVQAYAHVTEFQKRGLPHEHILLIMKP 1061
Query: 177 SDGVQSAITN 186
S +TN
Sbjct: 1062 G----SKLTN 1067
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQA 176
GQ+P+DRPD+V+RVF+ K+ +++ + K Y+G+ +A + EFQKRGLPH HIL+ ++
Sbjct: 1264 GQQPQDRPDLVARVFRAKLRDMLDLFTKKKYYGEVQAYAHVTEFQKRGLPHEHILLIMKP 1323
Query: 177 SDGVQSAITN 186
S +TN
Sbjct: 1324 G----SKLTN 1329
>Os02g0463700 Similar to Helicase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 1221
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 116 GGQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWL 174
GQ P+DRPD++ RVF+ K++E+ L + + FG +A Y +EFQK+GLPH H L+ +
Sbjct: 550 NGQTPQDRPDLIVRVFRAKLEEMKKQLFEKSIFGTVKAYTYVVEFQKKGLPHAHFLLIM 608
>Os02g0480100 Similar to Helicase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 1466
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQA 176
GQ P+DRPD+V RVF+ K+++L L + GK A +Y +EFQKRGLPH H L+ +
Sbjct: 691 GQTPQDRPDLVVRVFRAKLEDLKKQLFEKHILGKVIAHVYVVEFQKRGLPHAHFLLIMSG 750
Query: 177 SDGVQSA 183
+ SA
Sbjct: 751 RYKLTSA 757
>Os10g0186600
Length = 1638
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQA 176
GQ P+DRPD++ RVF+ K+++L L + GK A Y +EFQKRGLPH H L+ +
Sbjct: 659 GQTPQDRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDG 718
>Os10g0192300 Protein of unknown function DUF889, eukaryote family protein
Length = 1575
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 117 GQKPEDRPDIVSRVFKLKVDELVSVLKKGTYFGKARAVLYTIEFQKRGLPHVHILVWLQA 176
GQ P+DRPD++ RVF+ K+++L L + GK A Y +EFQKRGLPH H L+ +
Sbjct: 637 GQTPQDRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDG 696
>Os01g0556600 Protein of unknown function DUF889, eukaryote family protein
Length = 1932
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 75 SYYGPPAHVCRYCGAQFWYQERVKRSYSSDQGHIRFHLCCRGG 117
SYYG P+H C +CGA FWYQERVK+ Q I ++LCCRGG
Sbjct: 303 SYYGGPSHECPHCGAVFWYQERVKKGSVVSQRKILYNLCCRGG 345
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,370,353
Number of extensions: 234863
Number of successful extensions: 570
Number of sequences better than 1.0e-10: 31
Number of HSP's gapped: 570
Number of HSP's successfully gapped: 39
Length of query: 186
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 91
Effective length of database: 12,075,471
Effective search space: 1098867861
Effective search space used: 1098867861
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)