BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0552900 Os06g0552900|Os06g0552900
(173 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0552900 Similar to SP3D 357 2e-99
Os02g0232300 259 5e-70
Os06g0157700 Similar to SP3D 225 1e-59
Os01g0218500 Similar to SP3D 220 5e-58
Os06g0157500 Similar to CiFT protein 220 5e-58
Os04g0488400 Similar to FLOWERING LOCUS T protein 212 9e-56
Os11g0293800 209 1e-54
Os01g0202700 201 2e-52
Os12g0232501 195 1e-50
Os12g0152000 Similar to Terminal flower 1-like protein 181 2e-46
Os11g0152500 PEBP family protein 181 2e-46
Os02g0531600 PEBP family protein 179 1e-45
Os04g0411400 Similar to Terminal flower 1-like protein 176 6e-45
Os01g0748800 PEBP family protein 162 1e-40
Os01g0111600 Similar to MOTHER of FT and TF1 protein 146 6e-36
Os06g0498800 Similar to MOTHER of FT and TF1 protein 141 3e-34
Os09g0513300 PEBP family protein 119 1e-27
Os05g0518000 117 6e-27
>Os06g0552900 Similar to SP3D
Length = 173
Score = 357 bits (917), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MANDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRF 60
MANDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRF
Sbjct: 1 MANDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRF 60
Query: 61 AYTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMV 120
AYTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMV
Sbjct: 61 AYTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMV 120
Query: 121 LYQQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRRPT 173
LYQQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRRPT
Sbjct: 121 LYQQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRRPT 173
>Os02g0232300
Length = 185
Score = 259 bits (663), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 144/173 (83%), Gaps = 2/173 (1%)
Query: 1 MANDSLTRSHIVGDVLDQFSNSVPLTVMY--DGRPVFNGKEFRSSAVSMKPRVEIGGDDF 58
MANDSL ++GDVLD F ++V LTVMY DG PV +G E R+ AV+ KP VE+GGDD
Sbjct: 1 MANDSLATGRVIGDVLDPFISTVDLTVMYGDDGMPVISGVELRAPAVAEKPVVEVGGDDL 60
Query: 59 RFAYTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIV 118
R AYTLVMVDPDAPNPSNPTLREYLHWMVTDIP+STD ++GRE+V YESP+PT GIHR+V
Sbjct: 61 RVAYTLVMVDPDAPNPSNPTLREYLHWMVTDIPASTDATYGREVVCYESPNPTTGIHRMV 120
Query: 119 MVLYQQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
+VL++QLGR TV+AP VR NF R+FARR+NLG PVAA+YFNCQR G+GGRR
Sbjct: 121 LVLFRQLGRETVYAPAVRHNFTTRAFARRYNLGAPVAAVYFNCQRQAGSGGRR 173
>Os06g0157700 Similar to SP3D
Length = 179
Score = 225 bits (573), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 127/168 (75%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAYT 63
D L +VGDVLD F S L V Y + V NG E + S V+ +PRVE+GG+D R YT
Sbjct: 9 DPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRTFYT 68
Query: 64 LVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLYQ 123
LVMVDPDAP+PS+P LREYLHW+VTDIP +T SFG+E++ YESP PTMGIHR+V VL+Q
Sbjct: 69 LVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVLFQ 128
Query: 124 QLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
QLGR TV+AP RQNFN + FA +NLG PVAA+YFNCQR G+GGRR
Sbjct: 129 QLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176
>Os01g0218500 Similar to SP3D
Length = 276
Score = 220 bits (560), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 126/169 (74%)
Query: 3 NDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAY 62
D L +VGDV+D F V L V Y R V NG E R SAV+ +PRV +GG D R Y
Sbjct: 107 GDPLVLGRVVGDVVDPFVRRVALRVAYGAREVANGCELRPSAVADQPRVAVGGPDMRTFY 166
Query: 63 TLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLY 122
TLVMVDPDAP+PS+P LREYLHW+VTDIP++T SFG E+V YESP P +GIHR+V +L+
Sbjct: 167 TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGVSFGTEVVCYESPRPVLGIHRLVFLLF 226
Query: 123 QQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
+QLGR TV+AP RQNF+ R FA +NLG PVAA+YFNCQR +GTGGRR
Sbjct: 227 EQLGRQTVYAPGWRQNFSTRDFAELYNLGLPVAAVYFNCQRESGTGGRR 275
>Os06g0157500 Similar to CiFT protein
Length = 178
Score = 220 bits (560), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 127/169 (75%)
Query: 3 NDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAY 62
+D L IVGDVLD F L+V Y R V NG E + S V+ +PRV +GG+D R Y
Sbjct: 7 DDPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMRTFY 66
Query: 63 TLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLY 122
TLVMVDPDAP+PSNP LREYLHW+VTDIP +T +FG+E++ YESP PTMGIHR+V VL+
Sbjct: 67 TLVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLF 126
Query: 123 QQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
QQLGR TV+AP RQNF+ R+FA +NLG PVA +YFNCQR G+GGRR
Sbjct: 127 QQLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175
>Os04g0488400 Similar to FLOWERING LOCUS T protein
Length = 174
Score = 212 bits (540), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 125/171 (73%)
Query: 1 MANDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRF 60
M+ D L H+VGD+LD F+ S L V+Y+ + + NG E + S V+ +PR+EI G D R
Sbjct: 1 MSRDPLVVGHVVGDILDPFNKSASLKVLYNNKELTNGSELKPSQVANEPRIEIAGRDIRN 60
Query: 61 AYTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMV 120
YTLVMVDPD+P+PSNPT REYLHW+VTDIP S + S+G E+V+YESP PT GIHR V +
Sbjct: 61 LYTLVMVDPDSPSPSNPTKREYLHWLVTDIPESANASYGNEVVSYESPKPTAGIHRFVFI 120
Query: 121 LYQQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
L++Q + T++AP R NFN R F+ +NLG PVAA++FNCQR G GGRR
Sbjct: 121 LFRQYVQQTIYAPGWRPNFNTRDFSALYNLGPPVAAVFFNCQRENGCGGRR 171
>Os11g0293800
Length = 181
Score = 209 bits (531), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 119/170 (70%)
Query: 1 MANDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRF 60
+A D L H+VGD++D F + L V Y+ + + NG E + S V +PR+ I G D R
Sbjct: 5 LAADPLVVGHVVGDIVDPFVTTASLRVFYNSKEMTNGSELKPSQVLNQPRIYIEGRDMRT 64
Query: 61 AYTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMV 120
YTLVMVDPDAP+PSNPT REYLHWMVTDIP +TD FG EIV YESP PT GIHR V +
Sbjct: 65 LYTLVMVDPDAPSPSNPTKREYLHWMVTDIPETTDARFGNEIVPYESPRPTAGIHRFVFI 124
Query: 121 LYQQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGR 170
L++Q R T +AP RQNFN R FA +NLG PVAA++FNCQR G GGR
Sbjct: 125 LFRQSVRQTTYAPGWRQNFNTRDFAELYNLGSPVAALFFNCQRENGCGGR 174
>Os01g0202700
Length = 180
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 124/169 (73%), Gaps = 2/169 (1%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAYT 63
+SL ++GDV+D FS V L VMY+G V NG++ R SAVS +P VE+GGD +F YT
Sbjct: 5 NSLVLGRVIGDVVDLFSPEVTLRVMYNGVRVVNGEDLRPSAVSARPSVEVGGDLHQF-YT 63
Query: 64 LVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLYQ 123
+VMVDPDAPNPSNPTLREYLHW+VTDIP +TD ++GRE+V YESP P GIHR+ +VL++
Sbjct: 64 IVMVDPDAPNPSNPTLREYLHWLVTDIPGTTDANYGREVVCYESPRPAAGIHRVAVVLFR 123
Query: 124 QLGRGTVFAPQ-VRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
Q+ RG V P +R NF+ R FA LG PVAA +F C+ GTGGRR
Sbjct: 124 QMARGGVDQPPLLRHNFSTRGFADDHALGAPVAAAFFTCKPEGGTGGRR 172
>Os12g0232501
Length = 177
Score = 195 bits (495), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 119/172 (69%), Gaps = 1/172 (0%)
Query: 1 MANDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEI-GGDDFR 59
M+ D L IVGDV+D F S L + Y+ R + +G E R S V+ +P V+I GG D R
Sbjct: 3 MSRDPLVVGSIVGDVVDHFGASALLRLFYNHREMTSGSELRPSQVAGEPAVQITGGRDGR 62
Query: 60 FAYTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVM 119
YTLVMVDPDAP+PSNP+ REYLHW+VTD+P D S G E+V YESP PT GIHR+V
Sbjct: 63 ALYTLVMVDPDAPSPSNPSKREYLHWLVTDVPEGGDTSKGTEVVAYESPRPTAGIHRLVF 122
Query: 120 VLYQQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
++++Q R +++AP R NFN R FA ++LG PVAA YFNCQR G GGRR
Sbjct: 123 IVFRQTVRQSIYAPGWRSNFNTRDFAACYSLGSPVAAAYFNCQREGGCGGRR 174
>Os12g0152000 Similar to Terminal flower 1-like protein
Length = 173
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDG-RPVFNGKEFRSSAVSMKPRVEIGGDDFRFAY 62
+ L ++G+V+D F+ + V Y+ + VFNG EF SAV KPRVE+ G D R +
Sbjct: 6 EPLVVGRVIGEVIDSFNPCTKMIVTYNSNKLVFNGHEFYPSAVVSKPRVEVQGGDMRSFF 65
Query: 63 TLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLY 122
TLVM DPD P PS+P LRE+LHW+VTDIP +TD SFGREI++YESP P++GIHR V VL+
Sbjct: 66 TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREIISYESPKPSIGIHRFVFVLF 125
Query: 123 QQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGR 170
+Q R V P R +FN R FA LG PVAA+YFN QR T R
Sbjct: 126 KQKRRQAVVVPSSRDHFNTRQFAEENELGLPVAAVYFNAQRETAARRR 173
>Os11g0152500 PEBP family protein
Length = 173
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDG-RPVFNGKEFRSSAVSMKPRVEIGGDDFRFAY 62
+ L ++G+VLD F+ + + V Y+ + VFNG E SAV KPRVE+ G D R +
Sbjct: 6 EPLVVGRVIGEVLDTFNPCMKMIVTYNSNKLVFNGHELYPSAVVSKPRVEVQGGDLRSFF 65
Query: 63 TLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLY 122
TLVM DPD P PS+P LRE+LHW+VTDIP +TD SFGRE+++YESP P +GIHR + VL+
Sbjct: 66 TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVISYESPKPNIGIHRFIFVLF 125
Query: 123 QQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGR 170
+Q R TV P R +FN R FA +LG PVAA+YFN QR T R
Sbjct: 126 KQKRRQTVIVPSFRDHFNTRRFAEENDLGLPVAAVYFNAQRETAARRR 173
>Os02g0531600 PEBP family protein
Length = 173
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDG-RPVFNGKEFRSSAVSMKPRVEIGGDDFRFAY 62
+ L ++G+VLD F+ +V +T Y + VFNG EF SAV+ KPRVE+ G D R +
Sbjct: 6 EPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGDLRSFF 65
Query: 63 TLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLY 122
TLVM DPD P PS+P LRE+LHW+VTDIP +TD SFGRE+V+YESP P +GIHR ++VL+
Sbjct: 66 TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPRPNIGIHRFILVLF 125
Query: 123 QQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGR 170
+Q R V P R F+ R FA +LG PVAA+YFN QR T R
Sbjct: 126 RQKRRQAVSPPPSRDRFSTRQFAEDNDLGLPVAAVYFNAQRETAARRR 173
>Os04g0411400 Similar to Terminal flower 1-like protein
Length = 173
Score = 176 bits (447), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDG-RPVFNGKEFRSSAVSMKPRVEIGGDDFRFAY 62
+ L ++G+V+D F+ +V +T Y + VFNG E SAV KPRVE+ G D R +
Sbjct: 6 EPLVVGKVIGEVIDNFNPTVKMTATYSSNKQVFNGHELFPSAVVSKPRVEVQGGDLRSFF 65
Query: 63 TLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLY 122
TLVM DPD P PS+P LRE+LHW+VTDIP +TD SFGRE+V+YESP P +GIHR V+VL+
Sbjct: 66 TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPKPNIGIHRFVLVLF 125
Query: 123 QQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGR 170
+Q R V P R F+ R FA +LG PVAA+YFN QR T R
Sbjct: 126 KQKRRQAVTPPSSRDYFSTRRFAADNDLGLPVAAVYFNAQRETAARRR 173
>Os01g0748800 PEBP family protein
Length = 239
Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 124/227 (54%), Gaps = 60/227 (26%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAYT 63
+ L +H++ DVLD F ++PL + Y+ R + G E + SA KPRV+IGG D R YT
Sbjct: 8 EPLVLAHVIHDVLDPFRPTMPLRITYNDRLLLAGAELKPSATVHKPRVDIGGTDLRVFYT 67
Query: 64 LVMVDPDAPNPSNPTLREYLHW-------------------------------------- 85
LV+VDPDAP+PSNP+L EYLH+
Sbjct: 68 LVLVDPDAPSPSNPSLGEYLHYLSGIHRHPEVMVVDIFWVGQSSCDATSHLTWSLTCGPV 127
Query: 86 ------MVTDIPSSTDDSF---------------GREIVTYESPSPTMGIHRIVMVLYQQ 124
MV DIP +T +F ++++ YE P GIHR+V VL++Q
Sbjct: 128 GGGDHMMVIDIPGTTGVNFIPKNNIKDAAINEPKRQDLMLYERPELRYGIHRMVFVLFRQ 187
Query: 125 LGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
LGRGTVFAP++R NF+ RSFA++++L VAA YFNCQR G+GGRR
Sbjct: 188 LGRGTVFAPEMRHNFHCRSFAQQYHL-DIVAATYFNCQREAGSGGRR 233
>Os01g0111600 Similar to MOTHER of FT and TF1 protein
Length = 174
Score = 146 bits (369), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 101/165 (61%), Gaps = 8/165 (4%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGG--DDFRFA 61
D L ++G+V+D F S+ +T Y R + NG R SA P V I G +D
Sbjct: 6 DPLVVGRVIGEVVDLFVPSISMTAAYGDRDISNGCLVRPSAADYPPLVRISGRRNDL--- 62
Query: 62 YTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVL 121
YTL+M DPDAP+PS+P++RE+LHW+V +IP TD S G E+V Y P PT+GIHR V+VL
Sbjct: 63 YTLIMTDPDAPSPSDPSMREFLHWIVVNIPGGTDASKGEEMVEYMGPRPTVGIHRYVLVL 122
Query: 122 YQQLGR---GTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQR 163
Y+Q R G + P R NFN R+FA LG P A ++FN QR
Sbjct: 123 YEQKARFVDGALMPPADRPNFNTRAFAAYHQLGLPTAVVHFNSQR 167
>Os06g0498800 Similar to MOTHER of FT and TF1 protein
Length = 176
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAYT 63
D L ++GDV+D F + ++V + + + NG E + S + P V+I G +
Sbjct: 6 DPLVVGRVIGDVVDLFVPTTAMSVRFGTKDLTNGCEIKPSVAAAPPAVQIAGRVNEL-FA 64
Query: 64 LVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLYQ 123
LVM DPDAP+PS PT+RE+LHW+V +IP TD S G +V Y P P +GIHR VMVL+Q
Sbjct: 65 LVMTDPDAPSPSEPTMREWLHWLVVNIPGGTDPSQGDVVVPYMGPRPPVGIHRYVMVLFQ 124
Query: 124 QLGRGTVFAPQ---VRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRR 171
Q R P R F+ R+FA R +LG PVAA+YFN Q+ RR
Sbjct: 125 QKARVAAPPPDEDAARARFSTRAFADRHDLGLPVAALYFNAQKEPANRRRR 175
>Os09g0513300 PEBP family protein
Length = 260
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 85 WMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMVLYQQLGRGTVFAPQVRQNFNLRSF 144
W+VTDIP + D FG EIV YE+P P GIHR+V VL++Q R TV+AP RQNFN+R F
Sbjct: 56 WLVTDIPEAIDARFGNEIVPYEAPRPPAGIHRLVFVLFKQEARQTVYAPGWRQNFNVRDF 115
Query: 145 ARRFNLGKPVAAMYFNCQRPTGTGGRR 171
+ +NLG PVAA+YFNCQ+ +G GGRR
Sbjct: 116 SAFYNLGPPVAALYFNCQKESGVGGRR 142
>Os05g0518000
Length = 112
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 71/96 (73%)
Query: 4 DSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAYT 63
D L S I+ DVLD F +++ L V Y+ R + G + SAV KP+V++GG+D R +YT
Sbjct: 2 DPLYLSQIIPDVLDPFISTISLRVTYNSRLLLAGAALKPSAVVSKPQVDVGGNDMRVSYT 61
Query: 64 LVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFG 99
LV+VDPDAP+PS+P+LREYLHWMVTDIP +T SFG
Sbjct: 62 LVLVDPDAPSPSDPSLREYLHWMVTDIPETTSISFG 97
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,804,333
Number of extensions: 305646
Number of successful extensions: 537
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 523
Number of HSP's successfully gapped: 19
Length of query: 173
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 79
Effective length of database: 12,127,685
Effective search space: 958087115
Effective search space used: 958087115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 152 (63.2 bits)