Os06g0498800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MOTHER of FT and TF1 protein.
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Os06g0498800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MOTHER of FT and TF1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 518.53 | 1.07 | 9.85 | -0.401 | 1.79 | 7.55 | 0.0667 | -8.85 | 0.641 | 1.12 | 19.88 | 5753 | 5.56 | 1.58 |
| 621.25 | 1.16 | 9.53 | 0.771 | 1.88 | 7.9 | -0.213 | -- | 1.17 | 1.22 | 18.06 | 5757 | 5.07 | 1.97 |
| 518.31 | 1.06 | 9.85 | -0.369 | 1.79 | 7.55 | -- | -8.74 | 0.653 | 1.08 | 19.87 | 5754 | 5.57 | 1.52 |
| 552.76 | 1.1 | 9.64 | 0.597 | 1.64 | 8.67 | -- | -- | 0.743 | 0.268 | 17.42 | 8677 | 1.87 | 2.3 |
| 713.07 | 1.24 | 9.78 | -0.173 | -- | 7.76 | -- | -8.08 | 0.661 | -- | 19.68 | 5756 | 5.55 | 1.5 |
| 2758.36 | 2.46 | 8.91 | 6.19 | 2.13 | -- | 0.866 | -- | 3.98 | 1.33 | -- | -- | -- | -- |
| 2761.42 | 2.46 | 8.92 | 6.16 | 2.13 | -- | -- | -- | 3.98 | 1.32 | -- | -- | -- | -- |
| 705.16 | 1.24 | 9.6 | 0.645 | -- | 9.51 | -- | -- | 0.802 | -- | 17.53 | 8824 | 1.3 | 2.4 |
| 550.69 | 1.09 | 9.68 | -- | 1.8 | 8.8 | -- | -- | 0.699 | 0.784 | 16.99 | 8629 | 1.87 | 0.865 |
| 3041.39 | 2.58 | 8.89 | 6.24 | -- | -- | -- | -- | 4.02 | -- | -- | -- | -- | -- |
| 3761.1 | 2.87 | 9.07 | -- | 2.24 | -- | -- | -- | 3.29 | 1.43 | -- | -- | -- | -- |
| 709.33 | 1.24 | 9.65 | -- | -- | 9.91 | -- | -- | 0.65 | -- | 17.2 | 8833 | 1.3 | 2.03 |
| 4069.18 | 2.98 | 9.04 | -- | -- | -- | -- | -- | 3.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 493.40 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 3 | 494.88 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 8 | 498.39 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 14 | 501.20 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 38 | 508.83 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 49 | 511.37 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 52 | 512.80 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 10 |
| 63 | 514.48 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 72 | 515.99 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 10 |
| 161 | 526.22 | temperature | 20 | 43200 | < th | dose independent | sin | 10 | NA |
| 176 | 528.41 | temperature | 20 | 43200 | > th | dose independent | sin | 10 | NA |
| 274 | 538.50 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 404 | 547.78 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 426 | 549.47 | temperature | 20 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 467 | 551.91 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 673 | 562.82 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 22 |
| 728 | 565.91 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 735 | 566.18 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 22 |
| 756 | 567.12 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 760 | 567.37 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 766 | 567.78 | temperature | 20 | 14400 | > th | dose dependent | rect. | 20 | 14 |
| 776 | 568.25 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 788 | 568.68 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 829 | 570.22 | temperature | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 838 | 570.68 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 888 | 572.37 | temperature | 20 | 14400 | > th | dose dependent | sin | 9 | NA |
| 897 | 572.76 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 907 | 573.12 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 938 | 574.15 | temperature | 20 | 14400 | < th | dose dependent | sin | 11 | NA |
| 958 | 574.98 | temperature | 20 | 14400 | > th | dose dependent | rect. | 5 | 3 |