BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0265900 Os06g0265900|Os06g0265900
(393 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0265900 Protein of unknown function DUF860, plant fami... 585 e-167
Os01g0293200 Protein of unknown function DUF860, plant fami... 117 1e-26
Os11g0544300 Protein of unknown function DUF860, plant fami... 96 3e-20
Os05g0571100 Protein of unknown function DUF860, plant fami... 89 7e-18
Os03g0181400 Protein of unknown function DUF860, plant fami... 85 8e-17
Os04g0312100 Protein of unknown function DUF860, plant fami... 82 7e-16
Os10g0510300 Protein of unknown function DUF860, plant fami... 82 9e-16
Os03g0646200 Protein of unknown function DUF860, plant fami... 78 1e-14
Os01g0617600 Protein of unknown function DUF860, plant fami... 77 2e-14
Os03g0786600 Protein of unknown function DUF860, plant fami... 75 1e-13
Os02g0526600 Protein of unknown function DUF860, plant fami... 71 1e-12
Os03g0667400 Similar to Iron regulated metal transporter 70 2e-12
Os12g0130100 Similar to Tyrosine-specific protein phosphata... 70 2e-12
>Os06g0265900 Protein of unknown function DUF860, plant family protein
Length = 393
Score = 585 bits (1509), Expect = e-167, Method: Compositional matrix adjust.
Identities = 305/393 (77%), Positives = 305/393 (77%)
Query: 1 MARWSSPKDPALEAALRRNRRWIVNNQIKRLLLRFPSRTAPVRLLQSRFKTLDLLGRAAN 60
MARWSSPKDPALEAALRRNRRWIVNNQIKRLLLRFPSRTAPVRLLQSRFKTLDLLGRAAN
Sbjct: 1 MARWSSPKDPALEAALRRNRRWIVNNQIKRLLLRFPSRTAPVRLLQSRFKTLDLLGRAAN 60
Query: 61 WLRKYPSCFDLFHXXXXXXXXXXXXXCFGFTKRMXXXXXXXXXXXXXXXXXXXDRLARVL 120
WLRKYPSCFDLFH CFGFTKRM DRLARVL
Sbjct: 61 WLRKYPSCFDLFHGGAGGDGDGGEEACFGFTKRMAVLVDAEEAAVAASEPAMADRLARVL 120
Query: 121 MLARGRRLQVSKLAAXXXXXXXXXXXXXXXXPARTDLFRLANPYPHRRNAAELELLRWVP 180
MLARGRRLQVSKLAA PARTDLFRLANPYPHRRNAAELELLRWVP
Sbjct: 121 MLARGRRLQVSKLAALRGPLGLPDDYLLRLLPARTDLFRLANPYPHRRNAAELELLRWVP 180
Query: 181 XXXXXXXXXXXXXXXXXXXPRFTCSLPPSWAKSHAKMEEFNSTPYISPYSERWAAIGTDA 240
PRFTCSLPPSWAKSHAKMEEFNSTPYISPYSERWAAIGTDA
Sbjct: 181 SLAVSSVEAAAASAADSSAPRFTCSLPPSWAKSHAKMEEFNSTPYISPYSERWAAIGTDA 240
Query: 241 DAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGLPEDTARMLHRHPCLFYVSNRYKIH 300
DAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGLPEDTARMLHRHPCLFYVSNRYKIH
Sbjct: 241 DAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGLPEDTARMLHRHPCLFYVSNRYKIH 300
Query: 301 TVVLREGYEGSELREKDPVVAAKDRLGELMQEGLHEYNQRRRSDNLXXXXXXXXXXXXXX 360
TVVLREGYEGSELREKDPVVAAKDRLGELMQEGLHEYNQRRRSDNL
Sbjct: 301 TVVLREGYEGSELREKDPVVAAKDRLGELMQEGLHEYNQRRRSDNLEKKRRRGEIEIKEE 360
Query: 361 XXXXXXXAARLDSAEKREERRKFYKVLFNDDNR 393
AARLDSAEKREERRKFYKVLFNDDNR
Sbjct: 361 EEEDDEEAARLDSAEKREERRKFYKVLFNDDNR 393
>Os01g0293200 Protein of unknown function DUF860, plant family protein
Length = 517
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 150/345 (43%), Gaps = 20/345 (5%)
Query: 8 KDPALEAALRRNRRWIVNNQIKRLLLRFPSRTAPVRLLQSRFKTLDLLGRAANWLRKYPS 67
+D AL+AA+ R+RR+ + +++ R +L P R +R L R + + L +LR+YP+
Sbjct: 34 RDAALDAAILRDRRYRLASRLVREVLLSPGRRLLLRYLSKRRQRIRLPVLVPTFLRRYPT 93
Query: 68 CFDLFHXXXXXXXXXXXXXCF-GFTKRMXXXXXXXXXXXXXXXXXXXDRLARVLMLARGR 126
+ F F R RLA++LM++ R
Sbjct: 94 LLSVSPPPNPVASPSPHLLSFLEFASR----------HHALHSPLLASRLAKLLMISSTR 143
Query: 127 RLQVSKLAAXXXXXXXXXXXXXXXXPARTDLFRL-ANPYPHRRNAAELELLRW----VPX 181
L V K+AA P LFRL +P P A LEL+ W
Sbjct: 144 ALPVPKIAAAKRDFGLPDDFLTSLVPRYPHLFRLVGDPGPDASGNAFLELVSWDDQLAKS 203
Query: 182 XXXXXXXXXXXXXXXXXXPRFTCSLPPSWAKSHAKME---EFNSTPYISPYSERWAAIGT 238
P FT LP + E ++ PY+SPY++
Sbjct: 204 VIELRADKEADVVGIRPRPNFTVKLPRGFYLKKEMREWVRDWLELPYVSPYADTSGLHPA 263
Query: 239 DADAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGLPEDTARMLHRHPCLFYVSNRYK 298
+AEKR + V+HE+LSL++ ++M+V + F EF L A RHP +FYVS +
Sbjct: 264 SPEAEKRLIGVLHEVLSLSVERRMAVPIIGKFCDEFRLSNAFANAFTRHPGIFYVSLKGG 323
Query: 299 IHTVVLREGY-EGSELREKDPVVAAKDRLGELMQEGLHEYNQRRR 342
I T VLRE Y E EL +KDP++ K+R +M EG EY + R
Sbjct: 324 IKTAVLREAYDENGELVDKDPMIELKERFVAIMDEGHREYLEELR 368
>Os11g0544300 Protein of unknown function DUF860, plant family protein
Length = 467
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 73/115 (63%)
Query: 215 AKMEEFNSTPYISPYSERWAAIGTDADAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREF 274
E+F T Y+SPY+E + +KRAVAV+HE+L+ TL K++ L HFRREF
Sbjct: 283 GNTEQFQKTTYLSPYAEPGGLTPGSPEFDKRAVAVMHEILNFTLEKRLVTDHLTHFRREF 342
Query: 275 GLPEDTARMLHRHPCLFYVSNRYKIHTVVLREGYEGSELREKDPVVAAKDRLGEL 329
+P+ R+L +H +FYVS R K +V L E Y+G+EL EK P+V K+++ +L
Sbjct: 343 VMPQKLMRLLLKHYGIFYVSERGKRFSVFLTESYDGTELIEKCPLVRWKEKVLQL 397
>Os05g0571100 Protein of unknown function DUF860, plant family protein
Length = 509
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%)
Query: 216 KMEEFNSTPYISPYSERWAAIGTDADAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFG 275
++ +F PYISPYS+ A+ EK A VVHE+LSLTL K+ V L HFR EF
Sbjct: 278 RVAQFKEMPYISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFR 337
Query: 276 LPEDTARMLHRHPCLFYVSNRYKIHTVVLREGYEGSELREKDPVVAAKDRLGELM 330
+ ML RHP +FYVS + +V LRE Y+ S+L EK +V K+++ L+
Sbjct: 338 FSQSLRGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALV 392
>Os03g0181400 Protein of unknown function DUF860, plant family protein
Length = 421
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 200 PRFTCSLPPSWAKSH-----AKMEEFNSTPYISPYSERWAAIGTDADAEKRAVAVVHELL 254
P FT S + K H E+F T Y+ PYSE + +KRAVAV+HE+L
Sbjct: 218 PNFT-SYYKFYGKVHHYVKKGNTEQFQKTTYLYPYSEARGLTPGSPEFDKRAVAVMHEVL 276
Query: 255 SLTLWKKMSVLKLEHFRREFGLPEDTARMLHRHPCLFYVSNRYKIHTVVLREGYEGSELR 314
+ TL K++ + L +F REF +P+ R+L +H +FYV R K +V L + Y+G++L
Sbjct: 277 NFTLEKRLVIDHLTYFCREFVMPQKLMRLLLKHYGIFYVYERGKRFSVFLTKSYDGTKLI 336
Query: 315 EKDPVVAAKDRLGEL 329
EK P+V K+++ +L
Sbjct: 337 EKCPLVRWKEKVLQL 351
>Os04g0312100 Protein of unknown function DUF860, plant family protein
Length = 502
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Query: 220 FNSTPYISPYSERWAAIGTDADAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGLPED 279
F+S P +SP+ + E+RA AVV E+L++T+ K+ V L HFRR+FGLP
Sbjct: 293 FHSLPEVSPFEPLDEGASLEM-MERRACAVVREVLAMTVEKRTLVDHLTHFRRDFGLPNR 351
Query: 280 TARMLHRHPCLFYVSNRYKIHTVVLREGY-EGSELREKDPVVAAKDRLGELMQEG 333
ML RHP LFYVS + H+V L E + + L +D ++ A+DRL EL++EG
Sbjct: 352 LRAMLVRHPELFYVSVKGLRHSVFLVEAFDDDGRLLVEDDMLVARDRLEELVREG 406
>Os10g0510300 Protein of unknown function DUF860, plant family protein
Length = 375
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 202 FTCSLPPSW---AKSHAKMEEFNSTPYISPYS-ERWAAIGTD-------ADAEKRAVAVV 250
F PP + + K++E+ PYISPY +G+ EKRAV +
Sbjct: 200 FKLQFPPGFRLTKEYRKKVKEWQQLPYISPYEVSIQKGVGSKRVSKMARKKMEKRAVGIA 259
Query: 251 HELLSLTLWKKMSVLKLEHFRREFGLPEDTARMLHRHPCLFYVSNRYKIHTVVLREGYEG 310
HE LSLT+ K + V K FR+ FG+ + + HP +FY+S + K HTV LRE Y+
Sbjct: 260 HEFLSLTVEKMVEVEKFSQFRKWFGIEVNVRDVFLDHPGIFYLSAKGKRHTVFLREAYDR 319
Query: 311 SELREKDPVVAAKDRLGELM 330
+L E + V A+ +L ELM
Sbjct: 320 GKLIEPNDVSEARRKLVELM 339
>Os03g0646200 Protein of unknown function DUF860, plant family protein
Length = 446
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 130/342 (38%), Gaps = 27/342 (7%)
Query: 8 KDPALEAALRRNRRWIVNNQIKRLLLRF--PSRTAPVRLLQSRFKTLDLLGRAANWLRKY 65
+D AL+ + R R + K LL P P+ L S T+ R +LR Y
Sbjct: 35 RDRALDHVVERERHLVPFLLAKDALLSAAPPPHAVPLHSLPS---TIPFPFRPLRFLRLY 91
Query: 66 PSCFDLFHXXXXXXXXXXXXXCFGFTKRMXXXXXXXXXXXXXXXXXXXDRLARVLMLARG 125
S F L T R+ DRL R+LMLA
Sbjct: 92 TSAFAL----------SPHPVAVSPTPRLAGIHSAEAQVLDSTRADAADRLLRLLMLAPA 141
Query: 126 RRLQVSKLAAXXXXXXXXXXXXXXXXPARTDLFRLANPYPHRRNAAELELLRW---VPXX 182
R L + +A P D F L+ R+ A LEL+ + +
Sbjct: 142 RALPLHLVARLRLDLGLAPDFPRSLLPNYPDYFALS------RDGALLELVCYRKDLAVS 195
Query: 183 XXXXXXXXXXXXXXXXXPRFTCSLPPSW---AKSHAKMEEFNSTPYISPYSERWAAIGTD 239
F S P + K ++++ PYISPY +
Sbjct: 196 AMQSYAQRTGGYKVGDAVPFPLSFPRGFELDKKVRKWLDDWQRLPYISPYEDGSHLTPRS 255
Query: 240 ADAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGLPEDTARMLHRHPCLFYVSNRYKI 299
EKR AV+HE+LSLT+ KKM L LP ++L RHP +FY+S++ +
Sbjct: 256 DITEKRTAAVLHEVLSLTVGKKMEKEVLVKLGEALRLPPGFRKVLARHPGIFYLSHKLRT 315
Query: 300 HTVVLREGYEGSELREKDPVVAAKDRLGELMQEGLHEYNQRR 341
TVVLRE + L +K P++ + + LM G E +R+
Sbjct: 316 QTVVLRESFRRHMLVDKHPMMGIRYQYLHLMHMGQEEAGKRK 357
>Os01g0617600 Protein of unknown function DUF860, plant family protein
Length = 466
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 7/114 (6%)
Query: 224 PYISPYSERWAAIGTDADA----EKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGLPED 279
PY SPY++ +A EKRAVA VHELLSLT+ K+ ++ +L FR G+P+
Sbjct: 283 PYASPYADVSGHDLRSLEARRRMEKRAVAAVHELLSLTVEKRTTLERLALFRDALGVPKK 342
Query: 280 TARMLHRHPCLFYVS---NRYKIHTVVLREGYEGSELREKDPVVAAKDRLGELM 330
L ++ +FY+S N+ K+HTV LRE Y EL E + + AA+ +L EL+
Sbjct: 343 IKEFLLKYQGIFYISTRGNQGKLHTVFLREAYYKGELVEPNEIYAARRKLEELL 396
>Os03g0786600 Protein of unknown function DUF860, plant family protein
Length = 405
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 212 KSHAKMEEFNSTPYISPYSERWAAIGTDAD-AEKRAVAVVHELLSLTLWKKMSVLKLEHF 270
K A +E F PY+SPY E ++ I D+D +EKR V V+HELLSL + +L
Sbjct: 246 KIEAWLEGFQKLPYVSPY-EDFSGIYRDSDVSEKRVVGVLHELLSLFVTCSAERRRLLCL 304
Query: 271 RREFGLPEDTARMLHRHPCLFYVSNRYKIHTVVLREGY--EGSELREKDPVVAAKDRLGE 328
R+ GLP+ R+ RHP +FY+ + K VVL+E Y G E+ P++ + +
Sbjct: 305 RQHLGLPQKFHRVFERHPHVFYLLLKEKTCFVVLKEAYLARGDTAIEEHPMLVVRRKYAG 364
Query: 329 LMQE 332
LM+E
Sbjct: 365 LMEE 368
>Os02g0526600 Protein of unknown function DUF860, plant family protein
Length = 386
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 217 MEEFNSTPYISPYSERWAAIGTDADAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGL 276
++E+ + PY SPY++ +EKR V V HELL LT+ K+ + + R+ G+
Sbjct: 236 LKEWQALPYTSPYADPSGLDRRTDVSEKRNVGVFHELLHLTVAKRTERRNVSNMRKLLGM 295
Query: 277 PEDTARMLHRHPCLFYVSNRYKIHTVVLREGYEGSEL 313
P+ ++ RHP +FY+S TVVLRE Y G L
Sbjct: 296 PQKFTKVFERHPGIFYLSRVLGTQTVVLREAYGGGSL 332
>Os03g0667400 Similar to Iron regulated metal transporter
Length = 175
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%)
Query: 225 YISPYSERWAAIGTDADAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREFGLPEDTARML 284
+ SPY A KRAVAV+HE+LSLT+ ++++ KLE F E+ LP L
Sbjct: 57 FPSPYLNARRVEPATPQARKRAVAVLHEILSLTMNRRLTSDKLEIFHNEYRLPCKLLLCL 116
Query: 285 HRHPCLFYVSNRYKIHTVVLREGYEGSELREKDPVVAAKDRLGELMQEGLHEYNQ 339
++ +FY++N+ TV L+E Y+ S L EK P++ DR L+ + N
Sbjct: 117 IKNHGIFYITNKGARSTVFLKEAYDDSNLVEKCPLLKFHDRFASLIGRTCSDSND 171
>Os12g0130100 Similar to Tyrosine-specific protein phosphatase-like protein
Length = 216
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 216 KMEEFNSTPYISPY-SERWAAIGTDADAEKRAVAVVHELLSLTLWKKMSVLKLEHFRREF 274
K+ + PY Y + I EK V ++HELLSLT+ K + + + HFRR F
Sbjct: 73 KLGNWQRLPYTKAYENNELHPIHNVEQLEKHIVGILHELLSLTVEKMIPLERFSHFRRPF 132
Query: 275 GLPEDTARMLHRHPCLFYVSNRYKIHTVVLREGYEGSELREKDPVVAAKDRLGELMQEGL 334
+ + ++ +HP +FY+S + TV+LRE Y L + +PV + ++ +L+ G
Sbjct: 133 DMEVNLRELILKHPGIFYISTKGSTQTVLLRESYSKGCLVDPNPVYNVRRKMLDLILSGC 192
Query: 335 HEYNQ 339
H ++
Sbjct: 193 HGIDE 197
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.136 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,311,985
Number of extensions: 331577
Number of successful extensions: 952
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 938
Number of HSP's successfully gapped: 14
Length of query: 393
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 290
Effective length of database: 11,657,759
Effective search space: 3380750110
Effective search space used: 3380750110
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)