Os11g0544300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF860, plant family protein.
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Os11g0544300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF860, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.65 | 0.427 | 10.1 | -0.0336 | 1.09 | 1.02 | 0.897 | 0.809 | -0.297 | 18.7 | 7.088 | 10 | -- | -- |
| 84.02 | 0.427 | 10.1 | -0.00427 | 1.09 | 0.964 | 0.767 | -- | -0.292 | 18.5 | 6.726 | 10 | -- | -- |
| 84.6 | 0.428 | 10.1 | -0.0287 | 1.1 | 1.01 | -- | 0.632 | -0.293 | 18.6 | 6.778 | 10 | -- | -- |
| 85.48 | 0.431 | 10.1 | -0.0148 | 1.1 | 0.983 | -- | -- | -0.292 | 18.6 | 5.82 | 10 | -- | -- |
| 121.82 | 0.514 | 10.1 | -0.0788 | -- | 1.12 | -- | 0.454 | -0.442 | -- | -2.672e-06 | 617 | -- | -- |
| 98.95 | 0.466 | 10.1 | -0.0042 | 1.16 | -- | 0.771 | -- | -0.298 | 17 | -- | -- | -- | -- |
| 100.47 | 0.469 | 10.1 | -0.00245 | 1.17 | -- | -- | -- | -0.294 | 17 | -- | -- | -- | -- |
| 121.81 | 0.514 | 10.1 | -0.0944 | -- | 1.2 | -- | -- | -0.426 | -- | -2.434 | 615 | -- | -- |
| 85.49 | 0.431 | 10.1 | -- | 1.1 | 0.984 | -- | -- | -0.29 | 18.6 | 5.82 | 10 | -- | -- |
| 172.01 | 0.613 | 10 | -0.045 | -- | -- | -- | -- | -0.324 | -- | -- | -- | -- | -- |
| 100.47 | 0.469 | 10.1 | -- | 1.17 | -- | -- | -- | -0.294 | 17 | -- | -- | -- | -- |
| 122.05 | 0.515 | 10.1 | -- | -- | 1.19 | -- | -- | -0.415 | -- | -6.081 | 615 | -- | -- |
| 172.06 | 0.612 | 10 | -- | -- | -- | -- | -- | -0.319 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.96 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 2 | 72.27 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 7 | 73.66 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 8 | 73.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 10 | 73.95 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 11 | 73.96 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 14 | 74.14 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 19 | 74.37 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 20 | 74.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 21 | 74.41 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 23 | 74.55 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 25 | 74.57 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 26 | 74.58 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 28 | 74.58 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 34 | 74.69 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 35 | 74.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 36 | 74.69 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 37 | 74.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 40 | 74.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 41 | 74.73 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 42 | 74.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 43 | 74.73 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 45 | 74.73 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 56 | 74.95 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 57 | 74.95 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 60 | 74.97 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 63 | 75.00 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 66 | 75.02 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 67 | 75.02 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 68 | 75.04 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 70 | 75.08 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 73 | 75.12 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 74 | 75.12 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 76 | 75.14 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 77 | 75.15 | wind | 1.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 83 | 75.23 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 95 | 75.31 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 99 | 75.35 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 5 |
| 101 | 75.36 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 103 | 75.36 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 104 | 75.36 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 106 | 75.36 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 107 | 75.36 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 109 | 75.36 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 110 | 75.37 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 115 | 75.41 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 14 | 18 |
| 117 | 75.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 121 | 75.45 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 123 | 75.47 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 133 | 75.53 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 135 | 75.53 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 136 | 75.53 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 137 | 75.53 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 5 |
| 139 | 75.53 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 142 | 75.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 144 | 75.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 158 | 75.68 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 160 | 75.72 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 164 | 75.77 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 166 | 75.78 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 171 | 75.81 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 176 | 75.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 178 | 75.83 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 179 | 75.83 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 182 | 75.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 183 | 75.83 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 185 | 75.83 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 188 | 75.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 189 | 75.84 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 199 | 75.89 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 201 | 75.90 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 202 | 75.91 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 214 | 76.01 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 217 | 76.04 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 20 |
| 219 | 76.05 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 236 | 76.11 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 246 | 76.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 247 | 76.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 261 | 76.29 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 262 | 76.30 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 264 | 76.30 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 270 | 76.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 272 | 76.33 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 273 | 76.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 275 | 76.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 276 | 76.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 288 | 76.36 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 292 | 76.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 293 | 76.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 310 | 76.48 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 311 | 76.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 320 | 76.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 324 | 76.50 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 19 |
| 326 | 76.50 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 348 | 76.61 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 358 | 76.64 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 17 |
| 361 | 76.64 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 363 | 76.65 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 382 | 76.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 386 | 76.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 389 | 76.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 401 | 76.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 402 | 76.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 403 | 76.75 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 410 | 76.75 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 427 | 76.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 454 | 76.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 460 | 76.90 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 8 | 11 |
| 586 | 77.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 6 |
| 594 | 77.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 618 | 77.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 18 |
| 621 | 77.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 18 |
| 623 | 77.18 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 634 | 77.20 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 686 | 77.35 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 693 | 77.37 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 734 | 77.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 22 |
| 736 | 77.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 786 | 77.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 799 | 77.56 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 851 | 77.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 855 | 77.69 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 913 | 77.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 942 | 77.92 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 964 | 77.98 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 973 | 78.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 978 | 78.00 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 984 | 78.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 985 | 78.02 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 988 | 78.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 989 | 78.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |