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Os10g0510300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF860, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.2 (0.0255) R2 : 0.00371
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0699 (0.0536) R2dN8 : 0.0048 R2N8 : 0.00371
σ : 0.48
deviance : 105.68
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
85.13 0.434 7.16 0.703 0.0607 0.968 -0.533 -1.03 0.201 14.1 77.35 1361 -- --
85.74 0.431 7.17 0.626 0.0223 0.873 -0.562 -- 0.195 13.3 76.6 1343 -- --
86.06 0.432 7.16 0.708 0.0657 0.96 -- -1.19 0.208 14.6 78 1343 -- --
86.22 0.432 7.17 0.628 0.115 0.78 -- -- 0.2 17.9 75 1346 -- --
86.23 0.432 7.16 0.697 -- 0.963 -- -1.13 0.204 -- 77.87 1332 -- --
96.64 0.461 7.18 0.541 0.15 -- -0.398 -- 0.135 15.7 -- -- -- --
96.96 0.461 7.18 0.534 0.161 -- -- -- 0.133 16.9 -- -- -- --
86.77 0.434 7.17 0.62 -- 0.79 -- -- 0.2 -- 75.11 1333 -- --
96.11 0.457 7.18 -- 0.117 0.724 -- -- 0.133 17.4 77 1341 -- --
98.32 0.463 7.18 0.528 -- -- -- -- 0.129 -- -- -- -- --
104.47 0.478 7.2 -- 0.152 -- -- -- 0.0732 17 -- -- -- --
96.35 0.457 7.19 -- -- 0.846 -- -- 0.107 -- 78.05 1333 -- --
105.68 0.48 7.2 -- -- -- -- -- 0.0699 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.85 radiation 1.0 270 < th dose dependent rect. 5 22
2 76.10 temperature 10.0 270 > th dose dependent rect. 2 6
3 76.46 temperature 10.0 270 > th dose dependent rect. 3 4
8 77.38 wind 9.0 270 < th dose dependent rect. 3 4
11 77.57 precipitation 0.1 270 < th dose independent rect. 3 4
12 77.57 precipitation 0.1 270 < th dose dependent rect. 3 4
13 77.61 radiation 1.0 90 < th dose dependent sin 12 NA
15 77.71 radiation 1.0 270 < th dose independent rect. 6 21
17 77.83 radiation 20.0 270 < th dose independent rect. 2 6
23 77.98 precipitation 0.1 270 < th dose independent rect. 2 6
24 77.98 precipitation 0.1 270 < th dose dependent rect. 2 6
27 78.04 radiation 20.0 270 < th dose independent rect. 3 4
28 78.06 radiation 1.0 270 < th dose dependent rect. 15 12
29 78.07 wind 7.0 270 < th dose independent rect. 3 4
30 78.09 radiation 1.0 30 > th dose independent sin 11 NA
32 78.12 humidity 70.0 270 > th dose independent rect. 3 4
35 78.13 radiation 1.0 90 < th dose independent sin 12 NA
42 78.17 temperature 10.0 270 > th dose independent rect. 3 4
44 78.17 temperature 30.0 270 < th dose independent rect. 3 4
45 78.17 humidity 50.0 270 > th dose independent rect. 3 4
47 78.17 atmosphere 995.0 270 > th dose independent rect. 3 4
48 78.17 atmosphere 1015.0 270 < th dose independent rect. 3 4
50 78.17 temperature 10.0 270 > th dose independent rect. 7 20
51 78.18 atmosphere 995.0 270 > th dose independent rect. 7 20
53 78.22 wind 3.0 270 < th dose independent rect. 3 4
59 78.28 precipitation 0.1 270 < th dose independent rect. 14 17
60 78.28 precipitation 0.1 270 < th dose dependent rect. 14 17
61 78.29 radiation 1.0 270 < th dose dependent rect. 17 10
64 78.34 humidity 50.0 270 > th dose dependent rect. 3 4
71 78.42 wind 7.0 270 < th dose independent rect. 2 6
72 78.43 wind 9.0 270 < th dose dependent rect. 2 6
73 78.44 radiation 1.0 270 < th dose independent rect. 15 12
77 78.46 radiation 40.0 270 < th dose dependent rect. 3 4
79 78.47 precipitation 0.1 270 < th dose independent rect. 3 14
80 78.47 precipitation 0.1 270 < th dose dependent rect. 3 14
86 78.54 temperature 10.0 270 > th dose dependent rect. 3 16
87 78.55 temperature 15.0 10 > th dose dependent rect. 5 4
89 78.57 humidity 70.0 270 > th dose independent rect. 2 6
90 78.57 atmosphere 995.0 270 > th dose independent rect. 8 18
92 78.58 temperature 10.0 270 > th dose independent rect. 2 6
94 78.58 temperature 30.0 270 < th dose independent rect. 2 6
95 78.58 humidity 50.0 270 > th dose independent rect. 2 6
97 78.58 atmosphere 995.0 270 > th dose independent rect. 2 6
98 78.58 atmosphere 1015.0 270 < th dose independent rect. 2 6
100 78.58 temperature 10.0 270 > th dose independent rect. 8 18
101 78.61 radiation 1.0 270 < th dose independent rect. 17 10
102 78.61 temperature 10.0 10 > th dose dependent rect. 5 15
112 78.70 atmosphere 995.0 270 > th dose independent rect. 17 10
113 78.70 wind 9.0 270 < th dose independent rect. 7 20
133 78.98 precipitation 0.1 270 < th dose independent rect. 7 20
135 78.98 precipitation 0.1 270 < th dose dependent rect. 7 20
147 79.07 wind 9.0 270 < th dose independent rect. 8 18
149 79.14 temperature 10.0 270 > th dose independent rect. 7 7
150 79.14 atmosphere 995.0 270 > th dose independent rect. 7 7
151 79.14 atmosphere 1015.0 270 < th dose independent rect. 7 7
153 79.14 temperature 10.0 270 > th dose independent rect. 14 17
163 79.19 precipitation 0.1 270 < th dose independent rect. 7 7
165 79.19 precipitation 0.1 270 < th dose dependent rect. 7 7
166 79.20 radiation 1.0 10 > th dose independent rect. 16 17
167 79.23 wind 9.0 270 < th dose independent rect. 14 17
174 79.26 wind 1.0 270 > th dose independent rect. 7 7
177 79.27 humidity 50.0 270 > th dose dependent rect. 18 9
179 79.29 radiation 1.0 270 > th dose independent rect. 18 12
180 79.29 precipitation 0.1 270 < th dose independent rect. 8 18
181 79.29 precipitation 0.1 270 < th dose dependent rect. 8 18
190 79.37 wind 9.0 270 < th dose independent rect. 17 10
196 79.40 temperature 10.0 270 > th dose independent rect. 17 10
197 79.40 radiation 20.0 270 < th dose independent rect. 17 10
200 79.40 temperature 10.0 270 > th dose independent rect. 3 14
201 79.40 atmosphere 1015.0 270 < th dose independent rect. 3 14
218 79.43 wind 9.0 270 < th dose independent rect. 7 7
219 79.43 wind 9.0 270 < th dose independent rect. 3 14
224 79.49 humidity 50.0 270 > th dose dependent rect. 2 6
233 79.55 humidity 50.0 270 > th dose independent rect. 17 10
246 79.61 radiation 40.0 270 < th dose independent rect. 14 17
247 79.61 humidity 50.0 270 > th dose independent rect. 7 20
288 79.82 wind 1.0 270 > th dose independent rect. 8 18
291 79.85 atmosphere 1015.0 270 < th dose independent rect. 8 18
293 79.87 temperature 30.0 270 < th dose independent rect. 18 9
294 79.87 precipitation 0.1 270 < th dose independent rect. 12 10
295 79.87 precipitation 0.1 270 < th dose dependent rect. 12 10
309 79.94 radiation 1.0 10 < th dose dependent rect. 20 21
311 79.95 atmosphere 1015.0 270 < th dose independent rect. 7 20
315 79.96 radiation 1.0 30 > th dose independent rect. 18 15
348 80.04 humidity 50.0 270 > th dose independent rect. 7 7
349 80.05 humidity 50.0 270 > th dose independent rect. 8 18
359 80.10 atmosphere 995.0 270 > th dose dependent rect. 3 4
364 80.12 atmosphere 1005.0 10 > th dose independent rect. 5 4
370 80.14 radiation 1.0 30 > th dose independent rect. 5 4
386 80.16 temperature 10.0 270 > th dose independent rect. 12 10
387 80.16 temperature 10.0 270 > th dose independent rect. 22 14
388 80.16 atmosphere 995.0 270 > th dose independent rect. 22 14
400 80.21 wind 1.0 90 > th dose independent rect. 9 20
403 80.22 wind 1.0 90 > th dose independent rect. 9 6
426 80.31 radiation 1.0 10 < th dose dependent rect. 20 10
429 80.32 wind 7.0 10 < th dose dependent rect. 5 4
435 80.35 temperature 20.0 10 > th dose independent rect. 5 4
443 80.36 wind 1.0 270 > th dose independent rect. 12 10
455 80.40 atmosphere 1005.0 270 > th dose independent rect. 3 4
466 80.44 humidity 50.0 270 > th dose independent rect. 22 14
470 80.44 radiation 1.0 10 < th dose dependent rect. 20 12
479 80.48 radiation 1.0 270 > th dose independent rect. 4 2
489 80.48 precipitation 0.1 270 < th dose independent rect. 18 9
493 80.48 precipitation 0.1 270 < th dose dependent rect. 18 9
514 80.54 temperature 10.0 270 > th dose independent rect. 8 5
515 80.54 atmosphere 995.0 270 > th dose independent rect. 8 5
516 80.54 atmosphere 1015.0 270 < th dose independent rect. 8 5
517 80.54 precipitation 0.1 270 < th dose independent rect. 8 5
524 80.54 precipitation 0.1 270 < th dose dependent rect. 8 5
571 80.61 atmosphere 1005.0 270 > th dose independent rect. 4 2
585 80.63 wind 1.0 270 > th dose independent rect. 7 20
624 80.72 wind 9.0 270 < th dose independent rect. 12 10
636 80.75 wind 9.0 270 < th dose independent rect. 22 14
654 80.79 wind 9.0 270 < th dose independent rect. 8 5
666 80.81 radiation 1.0 10 < th dose independent rect. 20 20
687 80.86 humidity 50.0 270 > th dose independent rect. 8 4
689 80.87 atmosphere 1015.0 270 < th dose independent rect. 22 14
746 80.95 humidity 70.0 720 > th dose independent rect. 17 2
751 80.97 radiation 1.0 10 < th dose independent rect. 20 10
777 81.04 radiation 1.0 270 > th dose independent rect. 7 7
792 81.08 radiation 1.0 10 > th dose independent rect. 14 21
806 81.11 radiation 1.0 10 < th dose independent rect. 20 12
815 81.14 precipitation 0.1 10 < th dose independent rect. 16 17
822 81.14 precipitation 0.1 10 < th dose dependent rect. 16 17
826 81.16 precipitation 0.1 10 < th dose independent rect. 5 4
827 81.16 precipitation 0.1 10 < th dose dependent rect. 5 4
845 81.18 atmosphere 995.0 10 > th dose dependent rect. 5 4
853 81.21 temperature 20.0 10 > th dose independent rect. 5 15
856 81.22 atmosphere 995.0 270 > th dose independent rect. 14 17
863 81.24 radiation 1.0 270 > th dose independent rect. 8 4
867 81.25 precipitation 0.1 270 < th dose independent rect. 22 14
869 81.25 precipitation 0.1 270 < th dose dependent rect. 22 14
872 81.27 wind 7.0 10 < th dose independent rect. 5 4
874 81.27 temperature 10.0 10 > th dose independent rect. 5 4
876 81.27 temperature 30.0 10 < th dose independent rect. 5 4
877 81.27 humidity 50.0 10 > th dose independent rect. 5 4
879 81.27 atmosphere 995.0 10 > th dose independent rect. 5 4
880 81.27 atmosphere 1015.0 10 < th dose independent rect. 5 4
881 81.27 temperature 10.0 10 > th dose independent rect. 9 20
914 81.37 wind 3.0 10 < th dose independent rect. 5 4
922 81.38 atmosphere 995.0 10 > th dose independent rect. 9 20
923 81.39 atmosphere 995.0 270 > th dose dependent rect. 4 2
928 81.40 humidity 50.0 270 > th dose independent rect. 14 17
947 81.44 temperature 10.0 270 > th dose dependent rect. 12 9
957 81.47 wind 9.0 10 < th dose independent rect. 5 15