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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0667400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Iron regulated metal transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.54 (0.0364) R2 : 0.277
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.74 (0.141) R2dE : 0.229 R2E : 0.256
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.245 (0.0785) R2dN8 : 0.0212 R2N8 : 0.0486
σ : 0.671
deviance : 206.11
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 18.8
memory length : 73
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
179.8 0.63 3.59 -0.962 0.533 1.84 -0.218 -2.4 0.0618 8.84 20.06 52 -- --
184.01 0.632 3.54 -0.568 0.542 1.8 -0.535 -- 0.182 9.43 17.41 67 -- --
179.95 0.625 3.59 -0.985 0.536 1.85 -- -2.51 0.0557 8.78 20.14 51 -- --
184.92 0.633 3.54 -0.598 0.544 1.84 -- -- 0.176 9.04 17.4 67 -- --
192.26 0.649 3.6 -0.952 -- 1.97 -- -2.22 0.0555 -- 18.8 25 -- --
227.96 0.708 3.47 -0.161 0.836 -- -0.558 -- 0.476 12.2 -- -- -- --
229.31 0.709 3.47 -0.183 0.838 -- -- -- 0.474 12.2 -- -- -- --
197.27 0.657 3.56 -0.602 -- 1.97 -- -- 0.158 -- 17.7 18 -- --
193.5 0.648 3.51 -- 0.563 1.59 -- -- 0.262 9.05 18.8 73 -- --
273.47 0.773 3.49 -0.21 -- -- -- -- 0.461 -- -- -- -- --
230.19 0.71 3.47 -- 0.84 -- -- -- 0.494 12.2 -- -- -- --
206.11 0.671 3.54 -- -- 1.74 -- -- 0.245 -- 18.8 73 -- --
274.64 0.774 3.48 -- -- -- -- -- 0.484 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 176.86 temperature 20 30 > th dose dependent rect. 8 21
2 177.24 temperature 20 30 > th dose dependent rect. 8 23
4 177.72 temperature 20 90 > th dose dependent rect. 6 23
5 177.73 temperature 20 30 > th dose dependent rect. 23 23
12 179.20 temperature 20 90 > th dose dependent rect. 13 23
21 180.16 temperature 20 30 > th dose dependent no NA NA
24 180.46 temperature 30 90 < th dose dependent rect. 11 23
25 180.65 temperature 30 10 < th dose dependent rect. 1 23
33 181.01 temperature 30 30 < th dose dependent rect. 5 23
36 181.10 temperature 20 30 > th dose dependent rect. 2 23
37 181.12 temperature 20 30 > th dose dependent rect. 4 23
39 181.32 temperature 20 90 > th dose dependent rect. 16 23
45 181.68 temperature 30 90 < th dose dependent rect. 9 23
50 181.82 temperature 30 90 < th dose dependent no NA NA
52 181.91 temperature 30 90 < th dose dependent rect. 21 23
56 181.96 temperature 30 30 < th dose dependent rect. 3 23
61 182.17 temperature 30 30 < th dose dependent rect. 15 23
64 182.22 temperature 30 90 < th dose dependent rect. 23 23
65 182.28 temperature 20 30 > th dose dependent rect. 8 17
68 182.39 temperature 30 30 < th dose dependent rect. 13 23
91 183.10 temperature 30 30 < th dose dependent rect. 17 23
98 183.19 temperature 20 90 > th dose dependent rect. 19 23
104 183.45 temperature 20 90 > th dose dependent sin 5 NA
117 183.83 temperature 30 90 < th dose dependent rect. 5 14
126 184.37 temperature 30 90 < th dose dependent rect. 19 23
132 184.59 temperature 20 30 > th dose dependent rect. 8 14
176 185.67 temperature 10 270 > th dose dependent rect. 16 23
192 185.97 temperature 10 90 > th dose dependent sin 5 NA
197 186.08 temperature 30 90 < th dose dependent sin 4 NA
320 187.67 temperature 20 90 > th dose dependent rect. 23 13
394 188.46 temperature 30 90 < th dose dependent rect. 3 20
405 188.56 temperature 30 90 < th dose dependent rect. 5 18
414 188.61 temperature 30 30 < th dose dependent rect. 7 23
482 189.46 temperature 30 270 < th dose dependent rect. 1 16
501 189.59 temperature 25 90 < th dose independent rect. 5 14
557 190.18 temperature 10 720 > th dose dependent rect. 14 21
607 190.68 temperature 20 720 > th dose dependent rect. 16 19
670 191.16 temperature 25 90 < th dose independent rect. 5 16
674 191.21 temperature 20 1440 > th dose dependent rect. 8 4
717 191.54 temperature 20 90 > th dose dependent rect. 23 16
762 191.86 temperature 30 10 < th dose dependent rect. 3 21
773 191.91 temperature 10 720 > th dose dependent rect. 23 20
788 191.99 temperature 25 4320 < th dose dependent rect. 21 1
806 192.06 temperature 25 4320 < th dose dependent rect. 19 5
838 192.22 temperature 25 1440 < th dose independent rect. 7 6
871 192.36 temperature 10 4320 > th dose dependent rect. 21 1
872 192.36 temperature 25 4320 < th dose dependent rect. 23 1
880 192.39 temperature 20 1440 > th dose dependent rect. 21 15
893 192.44 temperature 30 1440 < th dose dependent rect. 8 4
986 192.67 temperature 30 720 < th dose dependent rect. 18 20
989 192.69 temperature 20 1440 > th dose dependent sin 5 NA