BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0229800 Os06g0229800|AF419099
(810 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0229800 Similar to Starch synthase IIA 1285 0.0
Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (E... 892 0.0
Os10g0437600 Similar to Starch synthase II, chloroplast pre... 783 0.0
AK072339 599 e-171
Os06g0160700 Similar to Starch synthase I, chloroplast prec... 443 e-124
Os07g0412100 Similar to Granule-bound starch synthase Ib, c... 318 1e-86
Os06g0133000 Granule-bound starch synthase I, chloroplast p... 315 7e-86
Os05g0533600 Similar to Starch synthase IVa (Glycogen (Star... 220 3e-57
Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthas... 215 1e-55
Os04g0624600 Similar to Starch synthase DULL1 (Fragment) 183 4e-46
Os10g0207650 99 1e-20
>Os06g0229800 Similar to Starch synthase IIA
Length = 810
Score = 1285 bits (3325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/718 (88%), Positives = 635/718 (88%)
Query: 93 FSSGAWQPPRSXXXXXXXXXXXXXTVPPVGRYGSXXXXXXXXXXXXXXXXXXXXXXSSKN 152
FSSGAWQPPRS TVPPVGRYGS SSKN
Sbjct: 93 FSSGAWQPPRSRRGGVGKVLKRRGTVPPVGRYGSGGDAARVRGAAAPAPAPTQDAASSKN 152
Query: 153 GALLSGRDDDTPASRNGSVVTGADKPAAATPPVTITKLPAPDSPVILPSVDKPQPEFVIX 212
GALLSGRDDDTPASRNGSVVTGADKPAAATPPVTITKLPAPDSPVILPSVDKPQPEFVI
Sbjct: 153 GALLSGRDDDTPASRNGSVVTGADKPAAATPPVTITKLPAPDSPVILPSVDKPQPEFVIP 212
Query: 213 XXXXXXXXXXXXXXXXXXXLPKPDNSEFAEDKSAKVVESAPKPKATRSSPIPAVEEETWD 272
LPKPDNSEFAEDKSAKVVESAPKPKATRSSPIPAVEEETWD
Sbjct: 213 DATAPAPPPPGSNPRSSAPLPKPDNSEFAEDKSAKVVESAPKPKATRSSPIPAVEEETWD 272
Query: 273 FKKYFDLNEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPLAGENVMNVIVVAAECSPWC 332
FKKYFDLNEP GPLAGENVMNVIVVAAECSPWC
Sbjct: 273 FKKYFDLNEPDAAEDGDDDDDWADSDASDSEIDQDDDSGPLAGENVMNVIVVAAECSPWC 332
Query: 333 KTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDVGIRKYYKAAGQDLEVKYFHAF 392
KTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDVGIRKYYKAAGQDLEVKYFHAF
Sbjct: 333 KTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDVGIRKYYKAAGQDLEVKYFHAF 392
Query: 393 IDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILFCKAAVEVPWHVPCGGVPYGDGNLV 452
IDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILFCKAAVEVPWHVPCGGVPYGDGNLV
Sbjct: 393 IDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILFCKAAVEVPWHVPCGGVPYGDGNLV 452
Query: 453 FLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDH 512
FLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDH
Sbjct: 453 FLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDH 512
Query: 513 FKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKTTEGGWGLHDIIRENDWKMNGIV 572
FKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKTTEGGWGLHDIIRENDWKMNGIV
Sbjct: 513 FKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKTTEGGWGLHDIIRENDWKMNGIV 572
Query: 573 NGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGR 632
NGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGR
Sbjct: 573 NGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGR 632
Query: 633 LDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMA 692
LDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMA
Sbjct: 633 LDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMA 692
Query: 693 HRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTMSAFDPFEDTGLGWTF 752
HRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTMSAFDPFEDTGLGWTF
Sbjct: 693 HRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTMSAFDPFEDTGLGWTF 752
Query: 753 DRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLVKAKYQW 810
DRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLVKAKYQW
Sbjct: 753 DRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLVKAKYQW 810
>Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (EC 2.4.1.21)
Length = 677
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/500 (82%), Positives = 459/500 (91%)
Query: 311 GPLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQD 370
GPLAG NVMNVIVVA+ECSP+CKTGGLGDV GALPKALARRGHRVMVV+PRYG+YAEA+D
Sbjct: 178 GPLAGPNVMNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEAKD 237
Query: 371 VGIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILFCK 430
+G+RK Y+ AGQD EV YFHAFIDGVDFVF++AP FRHR +DIYGG R +++KRMILFCK
Sbjct: 238 LGVRKRYRVAGQDSEVSYFHAFIDGVDFVFLEAPPFRHRHNDIYGGERFDVLKRMILFCK 297
Query: 431 AAVEVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIA 490
AAVEVPW PCGG YGDGNLVF+ANDWHTALLPVYLKAYYRDNG+MQYTRSVLVIHNIA
Sbjct: 298 AAVEVPWFAPCGGSIYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLVIHNIA 357
Query: 491 YQGRGPVDEFPYMELPEHYLDHFKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKT 550
+QGRGPVD+F M+LPEHY+DHF+LYDPVGGEH+N+F AGLKMADR VTVS GYLWE+KT
Sbjct: 358 HQGRGPVDDFATMDLPEHYIDHFRLYDPVGGEHSNVFAAGLKMADRAVTVSHGYLWEIKT 417
Query: 551 TEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKA 610
+GGWGLH+II NDWK+ GIVNGID EWNPEVD HLQSDGYANYT +LD+ K +CK
Sbjct: 418 MDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKE 477
Query: 611 ALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVML 670
ALQR+LGL+VRDDVPLIGFIGRLD QKGVDIIGDAMPWIAGQDVQ+V+LG+GR DLE ML
Sbjct: 478 ALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEML 537
Query: 671 QRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAV 730
+RFE++HN KVRGWVGFSV++AHRITAGADVL+MPSRFEPCGLNQLYAMAYGTVPVVHAV
Sbjct: 538 RRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAV 597
Query: 731 GGLRDTMSAFDPFEDTGLGWTFDRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMSQDL 790
GGLRDT++ FDPF DTGLGWTFDRAE +++I+ALGHCL TYR YKESWRGLQ RGM+QDL
Sbjct: 598 GGLRDTVAPFDPFADTGLGWTFDRAEANRMIDALGHCLNTYRNYKESWRGLQARGMAQDL 657
Query: 791 SWDHAAELYEEVLVKAKYQW 810
SWDHAAELYE+VLVKAKYQW
Sbjct: 658 SWDHAAELYEDVLVKAKYQW 677
>Os10g0437600 Similar to Starch synthase II, chloroplast precursor (EC 2.4.1.21)
(SS II) (GBSSII) (Granule-bound starch synthase II)
Length = 749
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/497 (71%), Positives = 429/497 (86%)
Query: 314 AGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDVGI 373
A +++N+I+VAAEC+PW KTGGLGDVAGALPKALARRGHRVMVVVP Y +YAE Q +G
Sbjct: 253 AAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGE 312
Query: 374 RKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILFCKAAV 433
+ Y+ AGQD+EV Y+HA+IDGVDFVFID P+F H ++DIYGG+R +I+KRM+L CKAA+
Sbjct: 313 PRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAAI 372
Query: 434 EVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIAYQG 493
EVPW+VPCGG YGDGNLVFLANDWHTALLPVYLKAYY DNG M Y RSVLVIHNIA+QG
Sbjct: 373 EVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQG 432
Query: 494 RGPVDEFPYMELPEHYLDHFKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKTTEG 553
RGP+D+F Y++LP Y+D FKLYDP GG+H NIF AG+K ADR++TVS GY WELKT EG
Sbjct: 433 RGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEG 492
Query: 554 GWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQ 613
GWGLH II E+DWK GIVNGID +WNP D+HL+SDGY NY++ ++ + K +CKAALQ
Sbjct: 493 GWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQ 552
Query: 614 RELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRF 673
+ELGL VR DVP+I FIGRLD QKGVD+I +AMPWIAGQDVQL++LG+GR+DLE L+R
Sbjct: 553 KELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRL 612
Query: 674 EAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGL 733
E+QH +VRGWVGFS+++AHR+TAGAD+L+MPSRFEPCGLNQLYAM YGTVPVVHAVGGL
Sbjct: 613 ESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGL 672
Query: 734 RDTMSAFDPFEDTGLGWTFDRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWD 793
RDT+ ++P+E++GLGWTF++AE ++LI+ALGHCL TYR Y+ SW GLQ RGM QDLSWD
Sbjct: 673 RDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWD 732
Query: 794 HAAELYEEVLVKAKYQW 810
+AA+LYEEVL+ AKYQW
Sbjct: 733 NAAKLYEEVLLAAKYQW 749
>AK072339
Length = 376
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 272/376 (72%), Positives = 325/376 (86%)
Query: 435 VPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIAYQGR 494
VPW+VPCGG YGDGNLVFLANDWHTALLPVYLKAYY DNG M Y RSVLVIHNIA+QGR
Sbjct: 1 VPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGR 60
Query: 495 GPVDEFPYMELPEHYLDHFKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKTTEGG 554
GP+D+F Y++LP Y+D FKLYDP GG+H NIF AG+K ADR++TVS GY WELKT EGG
Sbjct: 61 GPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGG 120
Query: 555 WGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQR 614
WGLH II E+DWK GIVNGID +WNP D+HL+SDGY NY++ ++ + K +CKAALQ+
Sbjct: 121 WGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQK 180
Query: 615 ELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFE 674
ELGL VR DVP+I FIGRLD QKGVD+I +AMPWIAGQDVQL++LG+GR+DLE L+R E
Sbjct: 181 ELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLE 240
Query: 675 AQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLR 734
+QH +VRGWVGFS+++AHR+TAGAD+L+MPSRFEPCGLNQLYAM YGTVPVVHAVGGLR
Sbjct: 241 SQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLR 300
Query: 735 DTMSAFDPFEDTGLGWTFDRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDH 794
DT+ ++P+E++GLGWTF++AE ++LI+ALGHCL TYR Y+ SW GLQ RGM QDLSWD+
Sbjct: 301 DTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDN 360
Query: 795 AAELYEEVLVKAKYQW 810
AA+LYEEVL+ AKYQW
Sbjct: 361 AAKLYEEVLLAAKYQW 376
>Os06g0160700 Similar to Starch synthase I, chloroplast precursor (EC 2.4.1.21)
(Soluble starch synthase 1) (SSS 1)
Length = 641
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/504 (47%), Positives = 311/504 (61%), Gaps = 27/504 (5%)
Query: 320 NVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDVGIRKYYK- 378
+V+ V E SP+ K+GGLGDV G+LP ALA RGHRVMVV+PRY + A ++ Y +
Sbjct: 134 SVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGALNKNFANAFYTEK 193
Query: 379 -----AAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEI---MKRMILFCK 430
G + EV +FH + D VD+VF+D P + HR ++YG N R L C
Sbjct: 194 HIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSY-HRPGNLYGDNFGAFGDNQFRYTLLCY 252
Query: 431 AAVEVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIA 490
AA E P + GG YG +F+ NDWH +L+PV L A YR G+ + RSVLVIHN+A
Sbjct: 253 AACEAPLILELGGYIYGQ-KCMFVVNDWHASLVPVLLAAKYRPYGVYRDARSVLVIHNLA 311
Query: 491 YQGRGPVDEFPYMELPEHYLDHFKLYDPV--------GGEHANIFGAGLKMADRVVTVSP 542
+QG P +P + LP + + P GE N + ADR+VTVS
Sbjct: 312 HQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQ 371
Query: 543 GYLWELKTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLD 602
GY WE+ T EGG GL++++ +NGIVNGID +WNP D L +Y+V L
Sbjct: 372 GYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPY----HYSVDDL- 426
Query: 603 SSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSG 662
S K +CKA LQ+ELGL +R DVPLIGFIGRLD QKG+D+I A+P + ++Q V+LGSG
Sbjct: 427 SGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSG 486
Query: 663 RRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYG 722
E ++ E+ + K RGWVGFSV ++HRITAG D+L+MPSRFEPCGLNQLYAM YG
Sbjct: 487 DPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYG 546
Query: 723 TVPVVHAVGGLRDTMSAFDPFE---DTGLGWTFDRAEPHKLIEALGHCLETYRKYKESWR 779
TVPVVH GGLRDT+ F+PF + G GW F K++ AL + TYR++K SW
Sbjct: 547 TVPVVHGTGGLRDTVENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWE 606
Query: 780 GLQVRGMSQDLSWDHAAELYEEVL 803
GL RGMS D +WDHAA YE++
Sbjct: 607 GLMKRGMSSDFTWDHAASQYEQIF 630
>Os07g0412100 Similar to Granule-bound starch synthase Ib, chloroplast precursor
(EC 2.4.1.21) (Fragment)
Length = 608
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 280/527 (53%), Gaps = 53/527 (10%)
Query: 312 PLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDV 371
P+ M +I +A EC PWCKTGGLGDV G LP ALA GHRVM +VPRY Y +A D
Sbjct: 74 PIVCSAGMTIIFIATECHPWCKTGGLGDVLGGLPPALAAMGHRVMTIVPRYDQYKDAWDT 133
Query: 372 GIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQ-----DDIYG----GNRQEIM 422
+ + V++FH + GVD VF+D P+F + +YG + ++
Sbjct: 134 NVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQ 193
Query: 423 KRMILFCKAAVEVPWHVPCGGVPYGDG----NLVFLANDWHTALLPVYLKAYYRDNGMMQ 478
R L C AA+E P + Y G N+VF+ANDWHT +LP YLK+ Y+ GM
Sbjct: 194 LRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYV 253
Query: 479 YTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDHFKLYD----PVGGEHANIFGAGLKMA 534
+ IHNIAYQGR ++F + LP+ +L F D PV G N AG+
Sbjct: 254 NAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKINWMKAGITEC 313
Query: 535 DRVVTVSPGYLWELKT-TEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGY 593
D V+TVSP Y+ EL + + G L I+R + GIVNG+D EWNP D ++
Sbjct: 314 DLVMTVSPHYVKELASGPDKGVELDGILRTKPLE-TGIVNGMDVYEWNPATDQYIS---- 368
Query: 594 ANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQD 653
Y ++ ++ K LQ E+GL V +PLI F+GRL+ QKG DI+ A+P +
Sbjct: 369 VKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGN 428
Query: 654 VQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGL 713
VQ+++LG+G++ +E L E ++ + RG F+V +AH + AGAD +++PSRFEPCGL
Sbjct: 429 VQIIVLGTGKKKMEEELILLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGL 488
Query: 714 NQLYAMAYGTVPVVHAVGGLRDTMS----------------AFDPFEDTGLGWTFDRAEP 757
QL M YG VP+ + GGL DT+ DP + T + T RA
Sbjct: 489 IQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVASTVKRA-- 546
Query: 758 HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
L+ Y +++ + M+QDLSW A+ +EEVL+
Sbjct: 547 ----------LKQYN--TPAFQEMVQNCMAQDLSWKGPAKKWEEVLL 581
>Os06g0133000 Granule-bound starch synthase I, chloroplast precursor (EC
2.4.1.21)
Length = 609
Score = 315 bits (808), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 207/510 (40%), Positives = 278/510 (54%), Gaps = 34/510 (6%)
Query: 319 MNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDVGIRKYYK 378
MNV+ V AE +PW KTGGLGDV G LP A+A GHRVMV+ PRY Y +A D + K
Sbjct: 83 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIK 142
Query: 379 AAGQDLEVKYFHAFIDGVDFVFIDAPLFRHR-----QDDIYGGNR----QEIMKRMILFC 429
A + V++FH + GVD VFID P F + + IYG + ++ R L C
Sbjct: 143 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLC 202
Query: 430 KAAVEVPWHVPCGGVPYGDG----NLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLV 485
+AA+E P + PY G ++VF+ NDWHT L YLK Y+ NG+ + +
Sbjct: 203 QAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFC 262
Query: 486 IHNIAYQGRGPVDEFPYMELPEHYLDHFKLYD----PVGGEHANIFGAGLKMADRVVTVS 541
IHNI+YQGR +++P + L E + F D PV G N AG+ ADRV+TVS
Sbjct: 263 IHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVS 322
Query: 542 PGYLWELKT-TEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVAS 600
P Y EL + G L +I+R + GIVNG+D EW+P D ++ A Y +
Sbjct: 323 PYYAEELISGIARGCELDNIMRLTG--ITGIVNGMDVSEWDPSKDKYIT----AKYDATT 376
Query: 601 LDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLG 660
+K K ALQ E GL V +PLI FIGRL+ QKG D++ A+P + +DVQ+VLLG
Sbjct: 377 AIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLG 436
Query: 661 SGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMA 720
+G++ E +L+ E ++ KVR V F+ +AH I AGADVL +PSRFEPCGL QL M
Sbjct: 437 TGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMR 496
Query: 721 YGTVPVVHAVGGLRDT-MSAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRK--Y 774
YGT + GGL DT + F L EP K+ L ++ Y
Sbjct: 497 YGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAY 556
Query: 775 KESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
+E R M+QDLSW A+ +E VL+
Sbjct: 557 EEMVRNC----MNQDLSWKGPAKNWENVLL 582
>Os05g0533600 Similar to Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 915
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 246/507 (48%), Gaps = 48/507 (9%)
Query: 319 MNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQ-------DV 371
+++I +AAE +P K GGL DV L KAL ++GH V +++P+Y Q DV
Sbjct: 422 LHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQVNNLKVLDV 481
Query: 372 GIRKYYKAAGQDLEVKYFHAFIDGVDFVFID----APLFRHRQDDIYGGNRQEIMKRMIL 427
++ Y++ G K + ++G+ FI+ A F Q Y G + KR
Sbjct: 482 VVQSYFE--GNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQ---YYGEHDD-FKRFAY 535
Query: 428 FCKAAVEVPWHVPCGGVPYGDGNLVFLANDWHTALL-PVYLKAYYRDNGMMQYTRSVLVI 486
F +AA+E+ + + +DW TA + P+Y +AY N R
Sbjct: 536 FSRAALELLYQSQ-------KKIDIIHCHDWQTAFVAPLYWEAYA--NLGFNSARICFTC 586
Query: 487 HNIAYQGRGPVDEFPYMELPEHYLDHF-KLYDPVGGEHANIFGAGLKMADRVVTVSPGYL 545
HN YQG P + L LD ++ D G N+ + ++ V TVSP Y
Sbjct: 587 HNFEYQGAAPAQDLACCGLDVQQLDREDRMRDNSHG-RINVVKGAIVYSNIVTTVSPTYA 645
Query: 546 WELKTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSK 605
E+++ EGG GL D ++ + K GI+NGID WNP D HL+ AN K
Sbjct: 646 LEVRS-EGGRGLQDSLKLHSRKFVGILNGIDTDTWNPSTDRHLKVQYNANDL-----QGK 699
Query: 606 PRCKAALQRELGLEVRD-DVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSG-- 662
KAAL+++L L + PL+G I RL QKGV +I A+ A Q VLLGS
Sbjct: 700 AANKAALRKQLNLSSTNASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPV 759
Query: 663 ---RRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAM 719
+R+ E + F Q+N+ +R + + ++H I A +D+ ++PS FEPCGL Q+ AM
Sbjct: 760 PHIQREFEGIADHF--QNNNNIRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQMIAM 817
Query: 720 AYGTVPVVHAVGGLRDTMSAFD----PFEDTGLGWTFDRAEPHKLIEALGHCLETYRKYK 775
YG+VP+V GGL D++ FD P E G+TF + L A+ Y +
Sbjct: 818 RYGSVPIVRKTGGLNDSVFDFDDETIPKELRN-GFTFVHPDEKALSGAMERAFNYYNRKP 876
Query: 776 ESWRGLQVRGMSQDLSWDHAAELYEEV 802
E W+ L + M D SW +A YE++
Sbjct: 877 EVWKQLVQKDMRIDFSWASSASQYEDI 903
>Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 972
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/514 (32%), Positives = 241/514 (46%), Gaps = 48/514 (9%)
Query: 319 MNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQ-------DV 371
++++ +AAE +P K GGL DV L KAL +GH V +V+P+Y Q DV
Sbjct: 477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDV 536
Query: 372 GIRKYYKAAGQDLEVKYFHAFIDGVDFVFID----APLFRHRQDDIYGGNRQEIMKRMIL 427
I+ Y+ G + ++G+ FI+ + F Q Y G + KR
Sbjct: 537 VIQSYFD--GNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQ---YYGEHDDF-KRYSY 590
Query: 428 FCKAAVEVPWHVPCGGVPYGDGNLVFLANDWHTALL-PVYLKAYYRDNGMMQYTRSVLVI 486
F +AA+E+ + G + +DW TA + P+Y Y R
Sbjct: 591 FSRAALELLYQS-------GKKIDIIHCHDWQTAFVAPLYWDIYATRG--FSSARICFTC 641
Query: 487 HNIAYQGRGPVDEFPYMELPEHYLDH-FKLYDPVGGEHANIFGAGLKMADRVVTVSPGYL 545
HN YQG P + Y L LD ++ D G N+ G+ ++ V TVSP Y
Sbjct: 642 HNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHG-RINVAKGGIVYSNIVTTVSPTYA 700
Query: 546 WELKTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSK 605
E+++ EGG GL D ++ + K GI+NGID WNP D L Y+ L K
Sbjct: 701 LEVRS-EGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLA----VQYSATDL-QGK 754
Query: 606 PRCKAALQRELGLEVRD-DVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSG-- 662
KA L+++LGL D PL+ I RL QKG+ +I A+ A Q VLLGS
Sbjct: 755 AANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPV 814
Query: 663 ---RRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAM 719
+R+ E + +F Q N+ +R + + ++H I A +D+ ++PS FEPCGL Q+ AM
Sbjct: 815 PHIQREFEGVADQF--QKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAM 872
Query: 720 AYGTVPVVHAVGGLRDTMSAFD----PFEDTGLGWTFDRAEPHKLIEALGHCLETYRKYK 775
YG+VP+V GGL D++ FD P E G+TF R + L L Y +
Sbjct: 873 RYGSVPIVRQTGGLCDSVFDFDDETIPVELRN-GFTFARTDEQDLSSCLERAFSYYSRKP 931
Query: 776 ESWRGLQVRGMSQDLSWDHAAELYEEVLVKAKYQ 809
W+ L + M D SWD A YE + A Q
Sbjct: 932 MVWKQLVQKDMQIDFSWDSPASQYENLYQSAVAQ 965
>Os04g0624600 Similar to Starch synthase DULL1 (Fragment)
Length = 1216
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 237/509 (46%), Gaps = 70/509 (13%)
Query: 313 LAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYG--DYAEAQD 370
+A E M+++ +A E +P K GGLGDV +L +A+ GH V V++P+Y + + +D
Sbjct: 762 VAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKD 821
Query: 371 VGIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILFCK 430
+ R+ + + E+K + ++ V F++ +YG N + R FC
Sbjct: 822 LHYRQSFTWG--NTEIKVWFGKVEDVPVYFLEPQNGMFWVGCVYGRNDE---SRFGFFCH 876
Query: 431 AAVEVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIA 490
+A+E G + +DW +A + K Y NG+ R V IHN+
Sbjct: 877 SALEFLRQ-------NGSSPDIIHCHDWSSAPVAWLFKEQYAQNGLSN-GRVVFTIHNLE 928
Query: 491 YQGRGPVDEFPYMELPEHYLDHFKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKT 550
+ G H G + D+ TVS Y E+
Sbjct: 929 F----------------------------GAHH---IGKAMARCDKATTVSYTYSREVSG 957
Query: 551 TEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKA 610
H I + K +GI NGID W+P D + +YT ++ K K
Sbjct: 958 -------HGAIAPHFSKFHGIRNGIDPDIWDPYSDNFIP----VHYTSENVVEGKSAAKK 1006
Query: 611 ALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSG-----RRD 665
ALQ+ LGL+ + D P++G I RL QKG+ +I A+ ++ Q+VLLGS + D
Sbjct: 1007 ALQQRLGLQ-QTDTPVVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGD 1065
Query: 666 LEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVP 725
+ + +++ +V+ + + ++H I AGAD +++PS FEPCGL QL AM YG++P
Sbjct: 1066 FTNLASKLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIP 1125
Query: 726 VVHAVGGLRDTMSAFDPFED----TGL---GWTFDRAEPHKLIEALGHCLETYRKYKESW 778
+V GGL DT+ D +D GL G++F+ A+ + + AL + T+ ++ +
Sbjct: 1126 IVRKTGGLYDTVFDVDDDKDRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWF 1185
Query: 779 RGLQVRGMSQDLSWDHAAELYEEVLVKAK 807
L R M QD +W+ A Y E+ A+
Sbjct: 1186 HSLCKRVMEQDWTWNRPALDYMELYHSAR 1214
>Os10g0207650
Length = 462
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%)
Query: 666 LEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVP 725
E ++ E+++ K RGWVGF+V ++HRITA D+L+M SRFEPCGLNQLYAM YG VP
Sbjct: 368 FEGWMRSIESEYKDKFRGWVGFTVLVSHRITACCDILLMSSRFEPCGLNQLYAMQYGIVP 427
Query: 726 VVHAVGGLR 734
VVH GGLR
Sbjct: 428 VVHGTGGLR 436
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,854,155
Number of extensions: 1097085
Number of successful extensions: 3124
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 3084
Number of HSP's successfully gapped: 11
Length of query: 810
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 701
Effective length of database: 11,344,475
Effective search space: 7952476975
Effective search space used: 7952476975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)