BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0153200 Os06g0153200|AK106752
(471 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0153200 Protein of unknown function DUF250 domain cont... 657 0.0
Os01g0749900 Protein of unknown function DUF250 domain cont... 351 8e-97
Os08g0135100 Similar to Phosphate/phosphoenolpyruvate trans... 87 3e-17
Os12g0136100 Protein of unknown function DUF250 domain cont... 78 1e-14
Os11g0139400 Protein of unknown function DUF250 domain cont... 76 5e-14
Os05g0121900 Similar to Phosphate/phosphoenolpyruvate trans... 71 2e-12
Os05g0494500 Protein of unknown function DUF250 domain cont... 69 7e-12
Os04g0692000 Protein of unknown function DUF6, transmembran... 67 4e-11
Os01g0802850 Protein of unknown function DUF250 domain cont... 67 4e-11
>Os06g0153200 Protein of unknown function DUF250 domain containing protein
Length = 471
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/456 (75%), Positives = 343/456 (75%)
Query: 1 VASHSQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYAFQAXXXXXXXXXXXXXWVPAI 60
VASHSQVG GYAFQA WVPAI
Sbjct: 1 VASHSQVGRWVRARAPRAEPPRRRREIALARAVVVEGYAFQARGGRGVGGGGGGGWVPAI 60
Query: 61 RLLPAAEHVXXXXXXXXXXHPTQXXXXXXXXXXXXXXXXXXXXHQXXXXXXXXXXXXXXX 120
RLLPAAEHV HPTQ HQ
Sbjct: 61 RLLPAAEHVRRGSGRGRRRHPTQGVRRGEPSRRRRGAPPERVRHQAGVAGACGARRAGAR 120
Query: 121 XXXQDGLLHPRLVRLQYLPHAIQQDAAWRQAGQVPGXXXXXXXXXXXXGGALQDHNAVPD 180
QDGLLHPRLVRLQYLPHAIQQDAAWRQAGQVPG GGALQDHNAVPD
Sbjct: 121 GGAQDGLLHPRLVRLQYLPHAIQQDAAWRQAGQVPGAAADEHRALRAAGGALQDHNAVPD 180
Query: 181 QXXXXXXXXXXXXLLHERFVFVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLM 240
Q LLHERFVFVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLM
Sbjct: 181 QRGGERGGDGMEGLLHERFVFVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLM 240
Query: 241 FAFAFRLESPSIKLLGIIVVISTGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQIL 300
FAFAFRLESPSIKLLGIIVVISTGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQIL
Sbjct: 241 FAFAFRLESPSIKLLGIIVVISTGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQIL 300
Query: 301 LQKDSYGLKNPITLMSHVTPVMAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLV 360
LQKDSYGLKNPITLMSHVTPVMAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLV
Sbjct: 301 LQKDSYGLKNPITLMSHVTPVMAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLV 360
Query: 361 GGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMV 420
GGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMV
Sbjct: 361 GGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMV 420
Query: 421 GVSLFNWYKYEKYKKGHINEDEVNSPSFDGDAKYII 456
GVSLFNWYKYEKYKKGHINEDEVNSPSFDGDAKYII
Sbjct: 421 GVSLFNWYKYEKYKKGHINEDEVNSPSFDGDAKYII 456
>Os01g0749900 Protein of unknown function DUF250 domain containing protein
Length = 471
Score = 351 bits (900), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 180/256 (70%), Positives = 217/256 (84%), Gaps = 1/256 (0%)
Query: 202 VPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVI 261
VPTAL TALDINLSN SLVFI+VTFATMCKSA+PIF+L+FAF FRLE PS LLGII+++
Sbjct: 203 VPTALATALDINLSNISLVFITVTFATMCKSAAPIFILLFAFLFRLEKPSFNLLGIILIV 262
Query: 262 STGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPV 321
S GVLLTV+KETEF+ WGF+F+ LAAVMSGFRW MTQILLQK+ YGL+NP TLMS+VTPV
Sbjct: 263 SFGVLLTVAKETEFNLWGFVFIMLAAVMSGFRWCMTQILLQKEEYGLRNPFTLMSYVTPV 322
Query: 322 MAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLVGGTLAFFMVLTEYVLVSATSA 381
MAI T +LS+ MDPW D + + +FD+ H++RS LLML+GG LAFFMVLTEYVLVS TSA
Sbjct: 323 MAITTAILSIAMDPWHDVRASHFFDNSTHIIRSSLLMLLGGALAFFMVLTEYVLVSVTSA 382
Query: 382 ITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKYEKYKKGHINED 441
+TVT+AG+VKEAVTILVAV +F+D FTWLKGLGL I+ GVSLFN YKY ++KKGH N++
Sbjct: 383 VTVTVAGIVKEAVTILVAVLFFNDTFTWLKGLGLGIIIFGVSLFNLYKYHRFKKGHRNKN 442
Query: 442 -EVNSPSFDGDAKYII 456
+ N + G +KY+I
Sbjct: 443 CDKNPQTSSGASKYVI 458
>Os08g0135100 Similar to Phosphate/phosphoenolpyruvate translocator protein-like
Length = 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 11/242 (4%)
Query: 202 VPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVI 261
+P A+ + L N++ ++ISV FA M K+ P+ + + AF LE S K+L I+ VI
Sbjct: 95 IPIGAMFAMTLWLGNSAYLYISVAFAQMLKAIMPVAVFLLGAAFGLEEMSCKMLAIMSVI 154
Query: 262 STGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPV 321
S GV++ E + G ++ V R +I L+K L N I++M +V+P
Sbjct: 155 SVGVIVASVGEITISWVGVVYQMGGVVAEALRLIFIEIFLKKKGVRL-NLISMMYYVSPC 213
Query: 322 MAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLVGGTLAFFMVLTEYVLVSATSA 381
A+ L PW +K +S F L L F + ++ ++++S TSA
Sbjct: 214 SALC------LFIPWLFLEKPKMDESASWNFPPFTLFL-NCLCTFILNMSVFLVISRTSA 266
Query: 382 ITVTIAGVVKE-AVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKYEKYKKGHINE 440
+T + GVV++ +V +L A + + T++ +G A + GV +N K + +G NE
Sbjct: 267 LTARVTGVVRDWSVVLLSAAIFADTQLTFINIIGYAIAIAGVVAYNNRKLKPKPQG--NE 324
Query: 441 DE 442
+
Sbjct: 325 QQ 326
>Os12g0136100 Protein of unknown function DUF250 domain containing protein
Length = 474
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 9/254 (3%)
Query: 202 VPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVI 261
VP AL + SN++ +++SV+F M K+ P+ + A AFR +S + ++ I
Sbjct: 166 VPIGALYALSLWFSNSAYIYLSVSFIQMLKALMPVAVYSLAVAFRTDSFRRASMLNMLGI 225
Query: 262 STGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPV 321
S GV + E FD +G + A R + QILL L NPIT + ++ P
Sbjct: 226 SAGVAVAAYGEARFDAFGVMLQLAAVAAEATRLVLIQILLTSKGMSL-NPITSLYYIAPC 284
Query: 322 MAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLVGGTL-AFFMVLTEYVLVSATS 380
L L PW + + +R + + +L AF + L ++LV TS
Sbjct: 285 ------CLVFLTLPWYFVELPRLRAAAGAAVRPDVFVFGTNSLCAFALNLAVFLLVGKTS 338
Query: 381 AITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKYEKYKKGHINE 440
A+T+ +AGVVK+ + I + D T + +G +GV+ +N K + K
Sbjct: 339 ALTMNVAGVVKDWLLIAFSWTVIKDTVTPVNLVGYGIAFLGVAYYNHAKLQGLKAREAER 398
Query: 441 DEVN-SPSFDGDAK 453
+ + + DGDA+
Sbjct: 399 RAASMATAKDGDAE 412
>Os11g0139400 Protein of unknown function DUF250 domain containing protein
Length = 388
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 15/257 (5%)
Query: 202 VPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVI 261
VP AL + SN++ +++SV+F M K+ P+ + A AFR +S + ++ I
Sbjct: 126 VPIGALYALSLWFSNSAYIYLSVSFIQMLKALMPVAVYSLAVAFRTDSFRRASMLNMLGI 185
Query: 262 STGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPV 321
S GV + E FD +G + A R + QILL L NPIT + ++ P
Sbjct: 186 SAGVAVAAYGEARFDAFGVMLQLAAVAAEATRLVLIQILLTSKGMSL-NPITSLYYIAPC 244
Query: 322 MAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLVGGTL-AFFMVLTEYVLVSATS 380
L L PW + + R + + +L AF + L ++LV TS
Sbjct: 245 ------CLVFLTLPWYFVELPRLRAAAGAAARPDVFVFGTNSLCAFALNLAVFLLVGKTS 298
Query: 381 AITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKYEKYKKGHINE 440
A+T+ +AGVVK+ + I + D T + +G +GV+ +N K + K E
Sbjct: 299 ALTMNVAGVVKDWLLIAFSWTVIKDTVTPVNLVGYGIAFLGVAYYNHAKLQGLKA---RE 355
Query: 441 DEVNSPSF----DGDAK 453
E + S DGDA+
Sbjct: 356 AERRAASMATAKDGDAE 372
>Os05g0121900 Similar to Phosphate/phosphoenolpyruvate translocator protein-like
Length = 340
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 216 NASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVISTGVLLTVSKETEF 275
N SL ++ V+F + +P F + A+A + ++ + GV++ E F
Sbjct: 127 NVSLRYLPVSFNQAVGATTPFFTAVLAYAVAARREACATYAALIPVVAGVVIATGGEPSF 186
Query: 276 DFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPVMAIATMVLSLLMDP 335
+GFI A + + ILL + L NP+ L+ ++ PV + L+ P
Sbjct: 187 HLFGFIMCIGATAARALKTVLQGILLSSEEEKL-NPMELLGYMAPVAVV-------LLIP 238
Query: 336 WSDFQKNTYFDSPWHVMR---SFL-LMLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVK 391
+ + + R SF+ ++L +LA+F+ LT +++ TS +T+ + G K
Sbjct: 239 ATFIMERNVLTMVTALAREDPSFIWILLCNSSLAYFVNLTNFLVTKHTSPLTLQVLGNAK 298
Query: 392 EAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYK 429
AV ++V++ F + T++ LG + GV L+ K
Sbjct: 299 GAVAVVVSILIFRNPVTFMGMLGYGITVAGVVLYGEAK 336
>Os05g0494500 Protein of unknown function DUF250 domain containing protein
Length = 354
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 8/240 (3%)
Query: 202 VPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVI 261
VP A+ + SN++ +++SV+F M K+ P+ + F+ E+ + ++ I
Sbjct: 96 VPIGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSI 155
Query: 262 STGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPV 321
S GV + E FD G A R + QILL L NPIT + +V P
Sbjct: 156 SFGVAIAAYGEARFDVRGVALQLAAVAFEATRLVLIQILLTSKGISL-NPITSLYYVAPC 214
Query: 322 MAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLVGGTLAFFMVLTEYVLVSATSA 381
L L+ PW F + + F + AF + L ++LV TSA
Sbjct: 215 ------CLGFLLVPWV-FVELPRLRAVGTFRPDFFVFGTNSLCAFALNLAVFLLVGKTSA 267
Query: 382 ITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKYEKYKKGHINED 441
+T+ +AGVVK+ + I + D T + G +GV+ +N K + K +
Sbjct: 268 LTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVAYYNHVKLQALKAKEAQKK 327
>Os04g0692000 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 16/257 (6%)
Query: 198 RFVFVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGI 257
R +F P + ++I L N SL +I V+F KS +P ++ + + ++
Sbjct: 85 RRIF-PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWSKHFEWRIWAS 143
Query: 258 IVVISTGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLK-NPITLMS 316
+V I G+LLT E F+ +GF AA++ S IL + +G K + I +
Sbjct: 144 LVPIVGGILLTSITELSFNMFGF----CAAMVGCLATSTKTILAESLLHGYKFDSINTVY 199
Query: 317 HVTPVMAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLVGGTLAFFMVLTEYVLV 376
++ P ATM+L+L T+F + + + ++++ G LAF + + + ++
Sbjct: 200 YMAP---FATMILALPAVLLEGGGVVTWFYTHDSIASALVIIIGSGVLAFCLNFSIFYVI 256
Query: 377 SATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKYEKYKK- 435
+T+A+T +AG +K AV +LV+ F + + + +G A +VG + + + ++ ++
Sbjct: 257 HSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISPMNAIGCAITLVGCTFYGYVRHLIPQQQ 316
Query: 436 ------GHINEDEVNSP 446
G + NSP
Sbjct: 317 AVAPGTGSPTTSQTNSP 333
>Os01g0802850 Protein of unknown function DUF250 domain containing protein
Length = 361
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 8/230 (3%)
Query: 202 VPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVI 261
+P +L + SN++ +++SV+F M K+ P+ + F+ E+ + ++ I
Sbjct: 103 LPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKENFKSSAMLNMLSI 162
Query: 262 STGVLLTVSKETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPV 321
S GV + E FD G A R + QILL L NPIT + +V P
Sbjct: 163 SFGVAIAAYGEARFDARGVALQLAAVAFEATRLVLIQILLTSKGISL-NPITSLYYVAPC 221
Query: 322 MAIATMVLSLLMDPWSDFQKNTYFDSPWHVMRSFLLMLVGGTLAFFMVLTEYVLVSATSA 381
L+ L+ PW+ F + + F + AF + L ++LV TSA
Sbjct: 222 ------CLAFLVIPWA-FVELPRLRAVGTFQPDFFIFGTNSLCAFALNLAVFLLVGKTSA 274
Query: 382 ITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKYE 431
+T+ +AGVVK+ + I + D T + G +GV +N K +
Sbjct: 275 LTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYYNHVKLQ 324
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,175,166
Number of extensions: 320316
Number of successful extensions: 886
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 881
Number of HSP's successfully gapped: 12
Length of query: 471
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 367
Effective length of database: 11,605,545
Effective search space: 4259235015
Effective search space used: 4259235015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 158 (65.5 bits)