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Os08g0135100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphate/phosphoenolpyruvate translocator protein-like.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0185) R2 : 0.194
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.407 (0.0389) R2dN8 : 0.251 R2N8 : 0.194
σ : 0.348
deviance : 55.49
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.76 0.314 10.3 0.406 0.103 -1.47 -0.536 -1.57 0.491 17.9 8.745 897 -- --
44.85 0.312 10.3 0.37 0.105 -1.15 -0.525 -- 0.488 17.8 8.788 881 -- --
45.34 0.314 10.3 0.395 0.097 -1.42 -- -1.02 0.488 19.2 8.723 820 -- --
45.38 0.314 10.3 0.382 0.0977 -1.21 -- -- 0.49 19.3 8.7 822 -- --
45.84 0.315 10.3 0.398 -- -1.44 -- -0.975 0.486 -- 8.773 820 -- --
52.12 0.338 10.3 0.25 0.132 -- -0.529 -- 0.44 19 -- -- -- --
52.74 0.34 10.3 0.258 0.135 -- -- -- 0.438 20.2 -- -- -- --
45.88 0.315 10.3 0.383 -- -1.24 -- -- 0.489 -- 8.703 820 -- --
49.06 0.326 10.3 -- 0.0876 -1.04 -- -- 0.436 19.2 8.8 740 -- --
53.74 0.343 10.3 0.257 -- -- -- -- 0.436 -- -- -- -- --
54.5 0.345 10.3 -- 0.134 -- -- -- 0.409 20.3 -- -- -- --
49.51 0.328 10.3 -- -- -1.07 -- -- 0.442 -- 8.8 739 -- --
55.49 0.348 10.3 -- -- -- -- -- 0.407 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.52 radiation 20 1440 < th dose independent rect. 11 2
3 41.58 humidity 90 14400 > th dose independent rect. 5 1
4 41.79 humidity 90 14400 > th dose independent rect. 24 8
5 41.80 radiation 1 4320 < th dose dependent rect. 4 1
8 41.89 wind 1 43200 < th dose independent rect. 2 1
13 42.05 wind 1 43200 > th dose independent rect. 2 1
14 42.07 radiation 1 4320 < th dose dependent rect. 24 5
16 42.09 temperature 20 1440 > th dose independent rect. 6 1
21 42.28 temperature 20 1440 < th dose independent rect. 5 2
22 42.29 humidity 90 14400 > th dose dependent rect. 5 2
26 42.38 radiation 1 4320 < th dose dependent rect. 20 9
35 42.47 humidity 90 14400 > th dose independent rect. 4 3
40 42.55 wind 1 43200 < th dose dependent rect. 2 1
41 42.58 humidity 90 14400 < th dose independent rect. 23 9
48 42.74 radiation 20 1440 < th dose dependent rect. 11 1
49 42.77 humidity 90 14400 > th dose independent rect. 23 2
52 42.80 humidity 90 14400 > th dose independent rect. 22 5
61 42.86 humidity 90 14400 < th dose independent rect. 23 2
79 43.10 humidity 90 14400 > th dose independent sin 9 NA
94 43.17 temperature 15 10 > th dose dependent sin 15 NA
103 43.23 temperature 15 90 > th dose dependent sin 16 NA
115 43.32 radiation 20 1440 > th dose independent rect. 11 2
149 43.50 wind 1 43200 > th dose independent rect. 9 3
159 43.55 wind 1 43200 < th dose independent rect. 9 3
161 43.55 humidity 90 14400 > th dose dependent rect. 24 10
166 43.57 radiation 10 1440 < th dose independent rect. 9 6
176 43.60 humidity 90 14400 > th dose dependent rect. 24 14
183 43.62 radiation 10 1440 < th dose dependent rect. 8 7
186 43.63 radiation 1 4320 > th dose independent rect. 18 12
202 43.67 temperature 30 10 < th dose dependent sin 15 NA
225 43.73 humidity 90 14400 > th dose dependent rect. 24 1
242 43.78 humidity 90 14400 < th dose independent sin 9 NA
245 43.78 radiation 1 14400 < th dose independent rect. 18 11
246 43.78 temperature 30 90 < th dose dependent sin 16 NA
263 43.83 humidity 90 14400 > th dose dependent sin 6 NA
313 43.94 wind 3 43200 < th dose dependent rect. 10 1
331 43.99 humidity 90 14400 < th dose independent rect. 5 2
346 44.02 temperature 15 270 > th dose dependent rect. 11 14
373 44.09 wind 1 43200 < th dose dependent rect. 9 3
380 44.11 humidity 90 14400 > th dose dependent rect. 23 3
392 44.14 temperature 20 1440 > th dose independent rect. 22 1
424 44.21 temperature 20 1440 < th dose independent rect. 22 1
466 44.29 wind 9 1440 > th dose dependent rect. 11 1
476 44.31 temperature 20 10 > th dose independent rect. 20 11
485 44.33 radiation 1 14400 < th dose independent rect. 18 7
494 44.34 radiation 1 14400 < th dose independent rect. 18 3
499 44.34 wind 1 43200 > th dose independent rect. 8 18
500 44.35 radiation 1 14400 < th dose independent rect. 18 1
512 44.37 wind 9 1440 < th dose independent rect. 11 1
540 44.43 radiation 1 4320 > th dose independent rect. 18 1
550 44.43 radiation 20 4320 < th dose independent rect. 17 13
613 44.51 temperature 20 10 > th dose dependent rect. 16 12
622 44.52 humidity 90 14400 > th dose dependent rect. 13 18
656 44.57 wind 1 43200 < th dose independent rect. 8 18
682 44.60 temperature 20 1440 > th dose dependent rect. 7 1
693 44.62 wind 1 43200 < th dose independent rect. 10 16
695 44.62 wind 7 270 > th dose dependent sin 10 NA
717 44.64 wind 7 720 < th dose independent rect. 12 23
748 44.68 temperature 15 270 > th dose dependent rect. 9 22
750 44.69 radiation 10 1440 < th dose independent rect. 9 15
757 44.70 radiation 10 1440 < th dose independent rect. 9 10
763 44.70 radiation 10 1440 < th dose independent rect. 9 17
798 44.74 wind 3 43200 < th dose independent rect. 12 5
804 44.74 wind 3 43200 < th dose dependent rect. 10 12
808 44.75 radiation 20 4320 < th dose independent rect. 17 7
816 44.75 radiation 1 1440 > th dose dependent rect. 12 1
840 44.77 wind 1 43200 < th dose dependent rect. 7 18
843 44.78 wind 3 43200 < th dose independent rect. 10 10
853 44.78 wind 7 720 > th dose dependent rect. 15 22
854 44.79 humidity 50 43200 < th dose independent rect. 7 2
882 44.81 radiation 40 4320 < th dose independent rect. 15 17
893 44.82 radiation 20 1440 < th dose independent rect. 11 11
897 44.82 radiation 20 1440 < th dose independent rect. 11 16
909 44.82 wind 1 43200 < th dose dependent rect. 9 16
911 44.83 temperature 20 10 > th dose independent sin 12 NA
912 44.83 humidity 70 1440 < th dose independent rect. 12 1
925 44.83 wind 9 43200 > th dose dependent rect. 12 1
930 44.84 wind 3 43200 < th dose independent rect. 13 1
946 44.85 radiation 20 4320 < th dose independent rect. 17 10
959 44.86 wind 3 43200 > th dose independent rect. 12 5
973 44.87 radiation 20 4320 < th dose independent rect. 17 2
989 44.88 wind 3 43200 > th dose independent rect. 11 9
1000 44.89 radiation 20 4320 < th dose independent rect. 17 5