Os05g0494500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os05g0494500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.92 | 0.37 | 11.1 | 1.56 | 0.758 | -0.617 | -0.35 | 0.534 | 0.405 | 15.1 | 25.8 | 1310 | -- | -- |
| 62.14 | 0.367 | 11.2 | 1.41 | 0.762 | -0.574 | -0.386 | -- | 0.354 | 15.1 | 25.7 | 1310 | -- | -- |
| 62.29 | 0.368 | 11.1 | 1.59 | 0.754 | -0.626 | -- | 0.66 | 0.412 | 15.2 | 25.76 | 1304 | -- | -- |
| 62.64 | 0.369 | 11.2 | 1.4 | 0.761 | -0.575 | -- | -- | 0.352 | 15.2 | 25.7 | 1309 | -- | -- |
| 89.55 | 0.441 | 11.1 | 1.61 | -- | -0.863 | -- | 0.7 | 0.489 | -- | 25.6 | 1145 | -- | -- |
| 71.12 | 0.395 | 11.2 | 1.23 | 0.839 | -- | -0.352 | -- | 0.17 | 15 | -- | -- | -- | -- |
| 71.52 | 0.396 | 11.2 | 1.22 | 0.84 | -- | -- | -- | 0.168 | 15.1 | -- | -- | -- | -- |
| 90.38 | 0.443 | 11.1 | 1.43 | -- | -0.832 | -- | -- | 0.435 | -- | 25.58 | 1141 | -- | -- |
| 109.38 | 0.49 | 11.2 | -- | 0.925 | -0.151 | -- | -- | 0.0984 | 15.1 | 25.42 | 1150 | -- | -- |
| 111.73 | 0.494 | 11.2 | 1.19 | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
| 110.91 | 0.493 | 11.2 | -- | 0.816 | -- | -- | -- | 0.0321 | 15.1 | -- | -- | -- | -- |
| 140.7 | 0.552 | 11.2 | -- | -- | -0.493 | -- | -- | 0.17 | -- | 25.55 | 1121 | -- | -- |
| 148.88 | 0.57 | 11.2 | -- | -- | -- | -- | -- | 0.0146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.28 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 34 | 59.72 | temperature | 20.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 38 | 59.86 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 24 | 11 |
| 67 | 60.43 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 68 | 60.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 80 | 60.58 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 81 | 60.59 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 105 | 60.88 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 108 | 60.89 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 11 |
| 109 | 60.90 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 112 | 60.91 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 206 | 61.58 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 223 | 61.64 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 320 | 61.99 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 364 | 62.15 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 366 | 62.16 | temperature | 25.0 | 1440 | > th | dose independent | sin | 17 | NA |
| 374 | 62.19 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 402 | 62.22 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 411 | 62.23 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 417 | 62.24 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 425 | 62.25 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 427 | 62.25 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 537 | 62.41 | temperature | 25.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 555 | 62.44 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 559 | 62.45 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 566 | 62.46 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 569 | 62.46 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 580 | 62.47 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 598 | 62.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 607 | 62.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 722 | 62.58 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 742 | 62.60 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 17 |
| 747 | 62.60 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 806 | 62.64 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 18 |
| 827 | 62.66 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 836 | 62.68 | temperature | 25.0 | 270 | < th | dose independent | rect. | 22 | 20 |
| 889 | 62.72 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 917 | 62.75 | temperature | 25.0 | 270 | > th | dose independent | sin | 7 | NA |
| 920 | 62.75 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 932 | 62.77 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 954 | 62.80 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 973 | 62.82 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |