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Os01g0749900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF250 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0143) R2 : 0.00312
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.036 (0.0301) R2dN8 : 0.00404 R2N8 : 0.00312
σ : 0.269
deviance : 33.31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.07 0.235 10.2 -0.608 0.175 0.296 0.0982 1.76 -0.0422 7.87 23.74 1361 -- --
27.46 0.246 10.2 -0.306 0.189 0.288 0.141 -- 0.035 9.88 34.8 784 -- --
25.1 0.233 10.2 -0.604 0.174 0.295 -- 1.75 -0.0419 7.82 23.7 1352 -- --
27.54 0.246 10.2 -0.303 0.188 0.278 -- -- 0.0336 9.69 37.04 758 -- --
26.21 0.238 10.2 -0.558 -- 0.311 -- 1.59 -0.0278 -- 44.27 707 -- --
28.26 0.249 10.2 -0.359 0.175 -- 0.0917 -- -0.00545 8.13 -- -- -- --
28.29 0.249 10.2 -0.357 0.176 -- -- -- -0.00565 8.02 -- -- -- --
28.18 0.247 10.2 -0.273 -- 0.34 -- -- 0.0474 -- 60.39 664 -- --
27.2 0.243 10.2 -- 0.174 0.361 -- -- 0.141 7.92 32.06 33723 -- --
29.98 0.256 10.2 -0.355 -- -- -- -- -0.00342 -- -- -- -- --
31.65 0.263 10.2 -- 0.174 -- -- -- 0.0341 8.17 -- -- -- --
28.8 0.25 10.2 -- -- 0.36 -- -- 0.139 -- 51.14 33837 -- --
33.31 0.269 10.2 -- -- -- -- -- 0.036 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.02 temperature 15 270 > th dose dependent rect. 7 18
3 24.07 radiation 1 1440 > th dose independent rect. 9 4
11 24.27 temperature 15 10 > th dose dependent rect. 7 22
23 24.39 radiation 10 4320 < th dose dependent rect. 24 5
26 24.44 radiation 1 1440 < th dose dependent rect. 9 7
31 24.49 radiation 1 1440 < th dose independent rect. 9 3
32 24.49 radiation 1 1440 < th dose dependent rect. 9 3
34 24.51 temperature 15 14400 < th dose independent rect. 9 1
42 24.55 temperature 15 14400 > th dose independent rect. 9 1
46 24.56 radiation 10 4320 < th dose dependent rect. 19 10
48 24.58 temperature 25 720 < th dose dependent rect. 6 14
50 24.59 radiation 1 1440 > th dose independent rect. 9 1
55 24.60 temperature 15 14400 > th dose independent rect. 5 8
65 24.62 temperature 15 14400 < th dose independent rect. 4 9
66 24.62 humidity 80 14400 > th dose dependent rect. 3 4
70 24.63 humidity 80 14400 > th dose dependent rect. 5 1
72 24.65 temperature 15 14400 > th dose independent rect. 7 4
87 24.68 temperature 25 720 < th dose dependent sin 23 NA
95 24.70 radiation 1 14400 > th dose independent rect. 9 1
101 24.71 temperature 15 14400 < th dose independent rect. 21 16
104 24.71 temperature 10 10 > th dose dependent rect. 23 23
110 24.73 temperature 15 14400 < th dose independent sin 3 NA
117 24.74 radiation 1 14400 < th dose independent rect. 9 1
119 24.74 temperature 15 14400 < th dose independent rect. 5 6
133 24.75 temperature 15 14400 > th dose independent rect. 22 3
139 24.75 temperature 30 270 < th dose dependent rect. 1 20
141 24.75 temperature 30 90 < th dose dependent rect. 1 22
144 24.76 temperature 15 14400 < th dose independent rect. 24 13
180 24.79 temperature 25 270 < th dose independent rect. 1 19
188 24.79 temperature 30 90 < th dose dependent rect. 3 20
190 24.80 temperature 15 14400 > th dose independent rect. 24 1
220 24.82 temperature 15 14400 > th dose independent sin 1 NA
236 24.83 wind 7 4320 > th dose independent rect. 17 1
238 24.83 temperature 15 14400 < th dose independent rect. 21 7
253 24.84 temperature 15 14400 > th dose independent rect. 21 16
262 24.85 wind 7 4320 < th dose independent rect. 17 1
279 24.86 temperature 15 14400 < th dose independent rect. 23 2
285 24.86 temperature 15 14400 < th dose independent rect. 9 21
296 24.87 humidity 90 14400 > th dose independent rect. 5 2
333 24.88 temperature 30 10 < th dose dependent sin 17 NA
338 24.89 temperature 15 14400 < th dose independent no NA NA
349 24.89 temperature 15 14400 > th dose independent rect. 9 20
352 24.89 temperature 15 14400 < th dose independent rect. 2 22
379 24.90 temperature 15 14400 > th dose independent rect. 5 22
403 24.91 temperature 15 14400 < th dose independent rect. 4 23
432 24.92 humidity 50 14400 > th dose dependent rect. 5 1
498 24.95 temperature 15 14400 > th dose independent rect. 24 13
517 24.96 humidity 90 14400 < th dose independent rect. 4 3
539 24.96 temperature 15 14400 > th dose independent rect. 2 23
544 24.96 temperature 25 90 < th dose independent rect. 24 23
548 24.96 radiation 40 43200 < th dose dependent rect. 24 5
549 24.96 radiation 40 43200 < th dose dependent rect. 19 10
550 24.96 temperature 20 10 > th dose dependent rect. 8 17
552 24.97 temperature 15 14400 > th dose independent no NA NA
563 24.97 temperature 25 90 < th dose independent rect. 4 18
570 24.97 temperature 15 14400 > th dose independent rect. 24 23
577 24.97 temperature 10 270 > th dose dependent rect. 15 23
601 24.98 temperature 30 10 < th dose dependent rect. 5 18
605 24.99 temperature 15 14400 < th dose independent rect. 2 1
629 25.00 temperature 15 14400 > th dose independent rect. 2 11
684 25.02 temperature 15 14400 > th dose independent rect. 2 1
685 25.02 temperature 15 14400 < th dose independent rect. 5 2
738 25.03 temperature 25 90 > th dose independent rect. 23 21
744 25.03 radiation 20 1440 < th dose dependent rect. 11 1
767 25.04 temperature 10 720 > th dose dependent rect. 5 14
771 25.04 temperature 15 10 > th dose dependent rect. 23 21
773 25.04 temperature 10 90 > th dose dependent rect. 21 23
774 25.05 radiation 1 1440 < th dose independent rect. 13 1
798 25.05 wind 7 4320 > th dose dependent rect. 18 1
799 25.05 temperature 20 14400 < th dose dependent rect. 13 1
810 25.05 temperature 30 90 < th dose dependent rect. 9 23
816 25.06 wind 7 4320 > th dose independent rect. 15 4
823 25.06 temperature 25 720 > th dose independent rect. 24 19
827 25.06 temperature 25 1440 < th dose dependent sin 4 NA
829 25.06 humidity 50 14400 > th dose dependent rect. 3 4
842 25.07 temperature 15 14400 > th dose independent sin 14 NA
864 25.07 temperature 10 10 > th dose dependent sin 16 NA
868 25.07 temperature 25 1440 < th dose dependent rect. 3 9
870 25.07 temperature 30 90 < th dose dependent rect. 11 12
871 25.07 temperature 25 1440 < th dose dependent rect. 1 14
875 25.07 temperature 25 1440 < th dose dependent rect. 1 17
878 25.07 temperature 25 1440 < th dose dependent rect. 22 20
915 25.08 temperature 20 14400 < th dose dependent rect. 2 17
917 25.08 temperature 25 1440 < th dose dependent rect. 22 18
929 25.08 temperature 10 10 > th dose dependent rect. 21 23