Os05g0121900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate/phosphoenolpyruvate translocator protein-like.
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Os05g0121900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate/phosphoenolpyruvate translocator protein-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 272.47 | 0.776 | 5.37 | -2.6 | 1.27 | 3.75 | 1.26 | -3.16 | -0.863 | 20.1 | 21.34 | 1387 | -- | -- |
| 280.08 | 0.779 | 5.26 | -1.69 | 1.28 | 3.58 | 1.21 | -- | -0.626 | 20.4 | 20.7 | 1442 | -- | -- |
| 277.17 | 0.775 | 5.37 | -2.63 | 1.27 | 3.74 | -- | -3.19 | -0.861 | 20.1 | 21.57 | 1390 | -- | -- |
| 284.33 | 0.785 | 5.26 | -1.74 | 1.28 | 3.64 | -- | -- | -0.621 | 20.1 | 20.46 | 1383 | -- | -- |
| 289.96 | 0.793 | 5.25 | -1.92 | -- | 4.53 | -- | -0.946 | -0.674 | -- | 19.85 | 822 | -- | -- |
| 705.51 | 1.25 | 5.07 | -0.358 | 1.3 | -- | 1.17 | -- | 0.234 | 21.1 | -- | -- | -- | -- |
| 710.33 | 1.25 | 5.07 | -0.399 | 1.3 | -- | -- | -- | 0.233 | 21.1 | -- | -- | -- | -- |
| 290.56 | 0.794 | 5.23 | -1.71 | -- | 4.54 | -- | -- | -0.621 | -- | 19.57 | 810 | -- | -- |
| 351.61 | 0.873 | 5.19 | -- | 1.2 | 3.33 | -- | -- | -0.293 | 19.7 | 21.8 | 1267 | -- | -- |
| 807.54 | 1.33 | 5.04 | -0.395 | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
| 714.52 | 1.25 | 5.06 | -- | 1.3 | -- | -- | -- | 0.278 | 21.1 | -- | -- | -- | -- |
| 357.64 | 0.881 | 5.16 | -- | -- | 3.99 | -- | -- | -0.338 | -- | 20.59 | 787 | -- | -- |
| 811.66 | 1.33 | 5.03 | -- | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 275.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 22 |
| 3 | 276.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 22 |
| 4 | 276.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 12 | 276.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 18 | 276.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 23 | 276.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 24 | 276.47 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 27 | 276.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 127 | 279.34 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 190 | 281.95 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 283 | 286.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 321 | 288.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 465 | 290.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 567 | 293.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |