BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0145100 Os06g0145100|Os06g0145100
(348 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0144200 Similar to Pectate lyase homolog (EC 4.2.2.2) 669 0.0
Os06g0145100 Similar to Pectate lyase homolog (EC 4.2.2.2) 663 0.0
Os06g0144900 Similar to Pectate lyase homolog (EC 4.2.2.2) 506 e-144
Os06g0583900 Similar to Pectate lyase homolog (EC 4.2.2.2) ... 438 e-123
Os02g0214400 Similar to Pectate lyase homolog (EC 4.2.2.2) ... 418 e-117
Os04g0137100 Similar to Pectate lyase (Fragment) 363 e-101
Os10g0457200 Virulence factor, pectin lyase fold family pro... 348 3e-96
Os05g0293500 Similar to Pectate lyase B (Fragment) 283 1e-76
Os08g0286100 216 1e-56
Os01g0546800 Virulence factor, pectin lyase fold family pro... 134 1e-31
Os01g0837100 116 3e-26
AK060609 93 2e-19
>Os06g0144200 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 450
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/348 (92%), Positives = 321/348 (92%)
Query: 1 MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGT 60
MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGT
Sbjct: 103 MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGT 162
Query: 61 LRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQXXXXX 120
LRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQ
Sbjct: 163 LRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVIIH 222
Query: 121 XXXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLIDAVS 180
GGGMIRDSKRHYGLRTR NIWIDHVSMSNCSDGLIDAVS
Sbjct: 223 NVHIHHSVPHGGGMIRDSKRHYGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDGLIDAVS 282
Query: 181 GSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVVNN 240
GSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVVNN
Sbjct: 283 GSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVVNN 342
Query: 241 DYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMM 300
DYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMM
Sbjct: 343 DYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMM 402
Query: 301 NGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
NGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC
Sbjct: 403 NGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 450
>Os06g0145100 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 348
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/348 (92%), Positives = 321/348 (92%)
Query: 1 MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGT 60
MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGT
Sbjct: 1 MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGT 60
Query: 61 LRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQXXXXX 120
LRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQ
Sbjct: 61 LRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVIIH 120
Query: 121 XXXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLIDAVS 180
GGGMIRDSKRHYGLRTR NIWIDHVSMSNCSDGLIDAVS
Sbjct: 121 NVHIHHSVPHGGGMIRDSKRHYGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDGLIDAVS 180
Query: 181 GSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVVNN 240
GSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVVNN
Sbjct: 181 GSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVVNN 240
Query: 241 DYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMM 300
DYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMM
Sbjct: 241 DYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMM 300
Query: 301 NGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
NGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC
Sbjct: 301 NGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
>Os06g0144900 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 448
Score = 506 bits (1304), Expect = e-144, Method: Compositional matrix adjust.
Identities = 236/350 (67%), Positives = 275/350 (78%), Gaps = 3/350 (0%)
Query: 2 ATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTL 61
TNPID CWRCR +WA+ RKRLA+C GFGH+ GG AGKIY+VTDA D+ +VIPR+GTL
Sbjct: 99 VTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTL 158
Query: 62 RYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQXXXXXX 121
R+ VIQ+RP+WIVFAR M+I+L +ELIV +KTIDGRGAQVH+TGAQIT+Q V
Sbjct: 159 RHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHN 218
Query: 122 XXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLIDAVSG 181
GG+IRDS H+G+R NIWIDHVSMSNCSDGLID G
Sbjct: 219 LHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDITDG 278
Query: 182 STAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGFFHVV 238
STAITISN HFTKHDHVMLFGA + +D++MQ+T+AFNHFGKGLV PRCRFGFFH+V
Sbjct: 279 STAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMV 338
Query: 239 NNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDV 298
NNDYTHWLMYAIGGNMNPTIISQGNRF A DD+ KEVTKREYT YDEYKEWVWKSQ D+
Sbjct: 339 NNDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDL 398
Query: 299 MMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
+NGAFFNESGG+NER Y++LD I A++G+YVG++T+FAGTL C VG C
Sbjct: 399 FLNGAFFNESGGRNERRYNRLDLIQARNGRYVGRMTRFAGTLPCRVGKKC 448
>Os06g0583900 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment)
Length = 448
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/351 (58%), Positives = 256/351 (72%), Gaps = 4/351 (1%)
Query: 2 ATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTL 61
ATNPIDRCWRCR DW TDRKRLARC +GFG T GG AGK Y+VTD +DD++ PR GTL
Sbjct: 98 ATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPGTL 157
Query: 62 RYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHIT-GAQITLQGVQXXXXX 120
R+GVIQD P+WI+FA+DMII L++E+++N +KTIDGRGAQV IT GAQ+T+Q
Sbjct: 158 RWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVIIH 217
Query: 121 XXXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLIDAVS 180
GGMIRDS H+G RT+ N+W+DH+S+SNC DGLID ++
Sbjct: 218 NIHIHDILQGKGGMIRDSPEHFGFRTQSDGDGISIFGSTNVWLDHLSLSNCQDGLIDVIA 277
Query: 181 GSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGFFHV 237
ST +TISN H T H+ VMLFG+S+S ++D++MQITVAFNHFG+GLV PRCR+GFFHV
Sbjct: 278 KSTGVTISNCHLTNHNDVMLFGSSDSFSEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHV 337
Query: 238 VNNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGD 297
VNNDYTHWLMYAIGG+ NPTIISQGNR+IAP +L AK +TK+ +E+K WVW S+ D
Sbjct: 338 VNNDYTHWLMYAIGGSKNPTIISQGNRYIAPPNLAAKRITKQLGATEEEWKNWVWHSEED 397
Query: 298 VMMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
+ M GA+F SGG ++ + D I K G YV +LT+FAG++ C G PC
Sbjct: 398 LFMEGAYFTTSGGPIQKQFSNKDLIKPKPGSYVTRLTRFAGSIPCVAGKPC 448
>Os02g0214400 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment)
Length = 446
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/353 (58%), Positives = 243/353 (68%), Gaps = 6/353 (1%)
Query: 1 MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGT 60
+ATNPIDRCWRCR DWATDRKRLARC GFG GG GKIYVVTD D + PR GT
Sbjct: 95 LATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYGT 154
Query: 61 LRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHIT--GAQITLQGVQXXX 118
LR+G +Q P+WI FA+ M+I+L QEL+V +KTIDGRGAQVHI GA IT+Q +
Sbjct: 155 LRWGAMQAAPLWITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARGGAGITVQFARNVI 214
Query: 119 XXXXXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLIDA 178
GG +RDS H G RTR ++W+DHVSMS C DGLID
Sbjct: 215 ITSLHVHDVKHSDGGAVRDSPTHIGPRTRADGDGISLFAATDVWVDHVSMSMCEDGLIDV 274
Query: 179 VSGSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGFF 235
V GST +TISN HFT H+ VMLFGAS+S QD+VMQITVAFNHFG+GLV PRCR+GFF
Sbjct: 275 VQGSTGVTISNSHFTNHNDVMLFGASDSYPQDKVMQITVAFNHFGRGLVQRMPRCRWGFF 334
Query: 236 HVVNNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQ 295
HVVNNDYTHWLMYAIGG M+PTI+SQGNR+IAP ++ AK +T R Y P E+K W W+S
Sbjct: 335 HVVNNDYTHWLMYAIGGGMSPTILSQGNRYIAPPNIAAKLIT-RHYAPEWEWKNWAWRSD 393
Query: 296 GDVMMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
GD+ MNGA+F S G R D + K G YV +LT+FAG L+C G PC
Sbjct: 394 GDLFMNGAYFQASNGAINRKVKGSDMVKPKPGSYVRRLTRFAGALSCRPGEPC 446
>Os04g0137100 Similar to Pectate lyase (Fragment)
Length = 492
Score = 363 bits (932), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 217/310 (70%), Gaps = 4/310 (1%)
Query: 4 NPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRY 63
NPID CWRC DW +R+RLA C GFG +GG GKIYVVTD SDD+ V P+KGTLRY
Sbjct: 125 NPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRY 184
Query: 64 GVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHIT-GAQITLQGVQXXXXXXX 122
VI+D P+WIVF RDM+I L+QELI+N KTIDGRGA VHI GA IT+Q V
Sbjct: 185 AVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGL 244
Query: 123 XXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLIDAVSGS 182
G M+R S HYG RT +IW+DH S+SNC+DGLIDA+ GS
Sbjct: 245 HIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGS 304
Query: 183 TAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGFFHVVN 239
TAIT+SN +FT H+ VML G S+S +D+ MQ+T+AFNHFG+GL+ PRCR G+FHVVN
Sbjct: 305 TAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVN 364
Query: 240 NDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVM 299
NDYTHW MYAIGG+ PTI SQGNR++AP + AKEVTKR T +K W W+S+GD++
Sbjct: 365 NDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLL 424
Query: 300 MNGAFFNESG 309
+NGAFF SG
Sbjct: 425 LNGAFFTPSG 434
>Os10g0457200 Virulence factor, pectin lyase fold family protein
Length = 446
Score = 348 bits (893), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/346 (52%), Positives = 220/346 (63%), Gaps = 6/346 (1%)
Query: 1 MATNPIDRCWRCR-DDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 59
+ NPID CWRC DW DR+RLA C GFG +GG G +YVVTD SD + V P G
Sbjct: 70 LTGNPIDHCWRCAGTDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPG 129
Query: 60 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHIT--GAQITLQGVQXX 117
TLRYG IQ+ P+WIVFA DM I+L +EL+VN KTIDGRGA VH+ GA ITLQ V
Sbjct: 130 TLRYGAIQEGPLWIVFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAGGACITLQYVSNV 189
Query: 118 XXXXXXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLID 177
G +R S HYG RTR ++W+DH ++S C+DGLID
Sbjct: 190 IIHNIHVHDCVPAGNANVRASPTHYGWRTRSDGDGISLYSARDVWVDHCALSRCADGLID 249
Query: 178 AVSGSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGF 234
A+ GSTAIT+SN +F+ H+ VML G S+ D MQ+T+AFNHFG LV PRCR G+
Sbjct: 250 AIMGSTAITVSNSYFSHHNEVMLLGHSDGYLPDSAMQVTIAFNHFGIQLVQRMPRCRRGY 309
Query: 235 FHVVNNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKS 294
FH+VNNDYT W MYAIGG+ +PTI SQGNR+IAP D NAKEVTKR T ++ W W++
Sbjct: 310 FHIVNNDYTAWEMYAIGGSASPTINSQGNRYIAPADPNAKEVTKRVDTEEGQWAGWNWRT 369
Query: 295 QGDVMMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTL 340
+GD+M+NGAFF SG E YD+ K V QLT AG L
Sbjct: 370 EGDMMVNGAFFVPSGEGLEAIYDKASSTDPKSSALVDQLTAGAGVL 415
>Os05g0293500 Similar to Pectate lyase B (Fragment)
Length = 373
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 199/351 (56%), Gaps = 24/351 (6%)
Query: 4 NPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRY 63
NPID CWRC WA +R+RLA C GFG R VGG G++YVV D DD P GTLRY
Sbjct: 41 NPIDDCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVNDTGDDA-ARPAPGTLRY 99
Query: 64 GVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHIT--GAQITLQGVQXXXXXX 121
G++QD P+WIVFA DM I EL+V+ KT+DGRGA+V + GA ++G
Sbjct: 100 GLVQDEPLWIVFAGDMTISPAHELVVSSRKTVDGRGARVVVGDGGACFAVRGASDVVIH- 158
Query: 122 XXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLIDAVSG 181
G IR + L ++W+DH ++ C+DGLID V G
Sbjct: 159 ----------GLTIRRCRPAPKLEA-GMSDGDGVHNSSDVWVDHCTVEACADGLIDVVVG 207
Query: 182 STAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGFFHVV 238
ST +T+SN HD +L G ++ D+ MQ+TVAFN FG GLV PRCRFG FHV+
Sbjct: 208 STRVTLSNNLLRNHDKAILLGHNDDYTDDKAMQVTVAFNRFGPGLVQRMPRCRFGLFHVI 267
Query: 239 NNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKR-EYTPYDEYKEWVWKSQGD 297
NNDY W YAIGG+ +PTIIS GNRF A D+ AKEVTKR + P + W W S GD
Sbjct: 268 NNDYIAWQKYAIGGSASPTIISHGNRFYA--DM-AKEVTKRDDDVPESVWHHWNWVSDGD 324
Query: 298 VMMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
+M+NGAFF SG + F A+ V +T AG L+C G C
Sbjct: 325 LMLNGAFFRASGEARTDNLKAPSF--ARSAPSVPSMTSSAGALSCKEGSHC 373
>Os08g0286100
Length = 384
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/368 (39%), Positives = 181/368 (49%), Gaps = 30/368 (8%)
Query: 2 ATNPIDRCWRCRDDWATDRKRLARCVRGFG--HRTVGGAAGKIYVVTDASDDEMVIPRKG 59
A N IDRCWR + +WA DR+RLA C GF R GA Y VTD SDD V PR G
Sbjct: 26 AANVIDRCWRGQRNWAADRQRLAVCSVGFAGKMRQNRGAGVVAYTVTDPSDDP-VRPRPG 84
Query: 60 TLRYGV-IQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGA---------QI 109
TLRYG + +WI FARDM I+L Q L V + TIDGRGA VH+ G +
Sbjct: 85 TLRYGATVLPAKVWITFARDMRIRLAQPLYVKNFTTIDGRGADVHVAGGAGIVLYHARDV 144
Query: 110 TLQGVQXXXXXXXXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXXXXXXXXNIWIDHVSMS 169
+ G+ GG ++ S G R +WIDH ++S
Sbjct: 145 IVHGLHVHDCRAQPPGRVVVPGGA-VQPSGSGDGDAIRLVASS-------KVWIDHNTLS 196
Query: 170 NCSDGLIDAVSGSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGL--- 226
C DGL+D GST +T+SN F HD VML G + D M++TVAFN FG +
Sbjct: 197 RCEDGLLDVTVGSTDVTVSNNWFHDHDKVMLLGHDDGFTTDRRMRVTVAFNRFGPNVNQR 256
Query: 227 VPRCRFGFFHVVNNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDL-NAKEVTKR-----E 280
+PR R G+ HVVNN Y W YAIGG+M P++ SQGN F A + K+VT+R
Sbjct: 257 MPRIRHGYAHVVNNLYDGWRDYAIGGSMGPSVKSQGNLFAASGGAGDNKKVTRRMPAVAR 316
Query: 281 YTPYDEYKEWVWKSQGDVMMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTL 340
+W S GD NGAFF + G + +Y++ A V LT G L
Sbjct: 317 GGGGGGKDQWHLHSVGDAFENGAFFRQVGNRVRPNYNRHQAFSAASAGDVRALTGGVGAL 376
Query: 341 NCHVGMPC 348
C C
Sbjct: 377 TCSATAAC 384
>Os01g0546800 Virulence factor, pectin lyase fold family protein
Length = 364
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 133/287 (46%), Gaps = 27/287 (9%)
Query: 21 KRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRYGVIQDRPMWIVFARDMI 80
+ LA GFG R +GG G +Y VT DD GTLR P+WIVF
Sbjct: 51 RALAGAAEGFGRRAIGGLHGPLYRVTSLDDDG-----HGTLRQACRAHGPLWIVFDVSGD 105
Query: 81 IQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQXXXXXXXXXXXXXXXGGGMIRDSKR 140
I LR L V +KTIDGRG +V + G + L+ + +I + +
Sbjct: 106 IHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRH-----------------VIVCNLQ 148
Query: 141 HYGLRTRXXXXXXXXXXXXNIWIDHVSMSNCSDGLIDAVSGSTAITISNGHFTKHDHVML 200
G R +IWID S+++C DGL+D GST +T+S F++HD ML
Sbjct: 149 IEGGRGHDVDAIQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTML 208
Query: 201 FGASNSDAQDEVMQITVAFNHFG--KGLVPRCRFGFFHVVNNDYTHWLMYAIGGNMNPTI 258
GA S D +++TV F + PR RFG H+ NN W +YA+ + +
Sbjct: 209 VGADPSHTGDRGIRVTVHHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQV 268
Query: 259 ISQGNRFIAPDDLNA--KEVTKREYTPYDEYKEWVWKSQGDVMMNGA 303
SQ N + A + A + V +R + WV +S+GD +NGA
Sbjct: 269 ASQCNVYEAGAERKAVFRYVPERAADREEAEAGWV-RSEGDAFLNGA 314
>Os01g0837100
Length = 343
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 130/292 (44%), Gaps = 23/292 (7%)
Query: 34 TVGGAAGKIYVVTDASDDEMVIPRKGTLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNK 93
+V G Y D+S M G+LR G + P+WIVF I L L V+ K
Sbjct: 17 SVEGVVFMPYATADSSLRVMADDGDGSLREGCRRREPLWIVFDVSGTIHLSTGLRVSSYK 76
Query: 94 TIDGRGAQVHITGAQITLQGVQXXXXXXXXXXXXXXXGGGMIRDSKRHYGLRTRXXXXXX 153
TIDGRG +V ++G + L+ + +I + G R
Sbjct: 77 TIDGRGQRVTLSGKGLQLRECEH-----------------VIVCNLEVEGCRGHDADAVA 119
Query: 154 XXXXXXNIWIDHVSMSNCSDGLIDAVSGSTAITISNGHFTKHDHVMLFGASNSDAQDEVM 213
++WID + C DGL+D GST +T+S F+ HD +L G S +D +
Sbjct: 120 VKPGSRHVWIDRCGLRGCGDGLLDVTRGSTDVTVSRCRFSAHDKAVLIGGSAGHVEDRAI 179
Query: 214 QITVAFNHFG--KGLVPRCRFGFFHVVNNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDL 271
++T+ F + PR RFG H+ NN W +YA+ ++ I+SQ N + A +
Sbjct: 180 RVTIHHCLFDGTRQRHPRVRFGRVHLYNNYTRGWGIYAVCASVESQIVSQCNIYEAGEKK 239
Query: 272 NAKEVTKREYTPYDEYKEWVWKSQGDVMMNGAFFNESGGQN-ERSYDQL-DF 321
+ + D+ +S+GD+ +NGA E Q+ E + D+L DF
Sbjct: 240 KVFKYMIEQAADRDQSSTGFIRSEGDLFLNGA--EECTAQDSEAAADELWDF 289
>AK060609
Length = 103
Score = 93.2 bits (230), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/102 (48%), Positives = 64/102 (62%)
Query: 247 MYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMMNGAFFN 306
MYAIGG+ PTI S+GNR++AP + AKEVTKR T +K W W+S+GD+++NGAFF
Sbjct: 2 MYAIGGSAEPTINSRGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFT 61
Query: 307 ESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
SG SY + + AK VG +T AG L+C G C
Sbjct: 62 PSGAGASASYSRASSLGAKSSSMVGTITSGAGALSCRGGSAC 103
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,869,851
Number of extensions: 481002
Number of successful extensions: 827
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 803
Number of HSP's successfully gapped: 13
Length of query: 348
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 246
Effective length of database: 11,709,973
Effective search space: 2880653358
Effective search space used: 2880653358
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 156 (64.7 bits)