BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0144900 Os06g0144900|AK070509
(448 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0144900 Similar to Pectate lyase homolog (EC 4.2.2.2) 856 0.0
Os06g0144200 Similar to Pectate lyase homolog (EC 4.2.2.2) 637 0.0
Os06g0145100 Similar to Pectate lyase homolog (EC 4.2.2.2) 561 e-160
Os02g0214400 Similar to Pectate lyase homolog (EC 4.2.2.2) ... 480 e-136
Os06g0583900 Similar to Pectate lyase homolog (EC 4.2.2.2) ... 480 e-135
Os04g0137100 Similar to Pectate lyase (Fragment) 396 e-110
Os10g0457200 Virulence factor, pectin lyase fold family pro... 375 e-104
Os05g0293500 Similar to Pectate lyase B (Fragment) 323 2e-88
Os08g0286100 266 3e-71
Os01g0546800 Virulence factor, pectin lyase fold family pro... 169 5e-42
Os01g0837100 149 6e-36
AK060609 87 3e-17
>Os06g0144900 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 448
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/448 (93%), Positives = 417/448 (93%)
Query: 1 MAGSVVTRSPLCSILFYVLXXXXXXXXXXXLVGNITADEEYWAKRSEVARSFNRAAYVSD 60
MAGSVVTRSPLCSILFYVL LVGNITADEEYWAKRSEVARSFNRAAYVSD
Sbjct: 1 MAGSVVTRSPLCSILFYVLATAAAATATATLVGNITADEEYWAKRSEVARSFNRAAYVSD 60
Query: 61 PVAVLNRFNEDVLNXXXXXXXXXXXXXXXXXXXXGPCTVTNPIDLCWRCRKNWASRRKRL 120
PVAVLNRFNEDVLN GPCTVTNPIDLCWRCRKNWASRRKRL
Sbjct: 61 PVAVLNRFNEDVLNTTTATAAAARRSLMRRYRRRGPCTVTNPIDLCWRCRKNWASRRKRL 120
Query: 121 AKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMVIRL 180
AKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMVIRL
Sbjct: 121 AKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMVIRL 180
Query: 181 AKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFG 240
AKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFG
Sbjct: 181 AKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFG 240
Query: 241 IRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVMLFGA 300
IRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVMLFGA
Sbjct: 241 IRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVMLFGA 300
Query: 301 RDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNPTIIS 360
RDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNPTIIS
Sbjct: 301 RDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNPTIIS 360
Query: 361 QGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDLFLNGAFFNESGGRNERRYNRLD 420
QGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDLFLNGAFFNESGGRNERRYNRLD
Sbjct: 361 QGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDLFLNGAFFNESGGRNERRYNRLD 420
Query: 421 LIQARNGRYVGRMTRFAGTLPCRVGKKC 448
LIQARNGRYVGRMTRFAGTLPCRVGKKC
Sbjct: 421 LIQARNGRYVGRMTRFAGTLPCRVGKKC 448
>Os06g0144200 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 450
Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/450 (67%), Positives = 350/450 (77%), Gaps = 14/450 (3%)
Query: 1 MAGSVVTRSPLCSILFYVLXXXXXXXX--XXXLVGNITADEEYWAKRSEVARSFNRAAYV 58
MA S VT S ILFY+L N TADEEYW KR+E ARSFNRAAYV
Sbjct: 13 MAASSVTGSRRLCILFYLLTVVATVVTAASAHTAHNATADEEYWEKRAEEARSFNRAAYV 72
Query: 59 SDPVAVLNRFNEDVLNXXXXXXXXXXXXXXXXXXXXGPCTVTNPIDLCWRCRKNWASRRK 118
SDPVA LNRFN DVL GPC TNPID CWRCR +WA+ RK
Sbjct: 73 SDPVATLNRFNADVLRATTRRSLARYT---------GPCMATNPIDRCWRCRDDWATDRK 123
Query: 119 RLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMVI 178
RLA+C GFGH+ GG AGKIY+VTDA D+ +VIPR+GTLR+ VIQ+RP+WIVFAR M+I
Sbjct: 124 RLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRYGVIQDRPMWIVFARDMII 183
Query: 179 RLAKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHH 238
+L +ELIV +KTIDGRGAQVH+TGAQIT+Q V +VIIHN+HIH+SVP GG+IRDS H
Sbjct: 184 QLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRH 243
Query: 239 FGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVMLF 298
+G+R SDGDGIS+M SSNIWIDHVSMSNCSDGLID GSTAITISN HFTKHDHVMLF
Sbjct: 244 YGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDGLIDAVSGSTAITISNGHFTKHDHVMLF 303
Query: 299 GARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNPTI 358
GA + +D++MQ+T+AFNHFGKGLV PRCRFGFFH+VNNDYTHWLMYAIGGNMNPTI
Sbjct: 304 GASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGFFHVVNNDYTHWLMYAIGGNMNPTI 360
Query: 359 ISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDLFLNGAFFNESGGRNERRYNR 418
ISQGNRF A DD+ KEVTKREYT YDEYKEWVWKSQ D+ +NGAFFNESGG+NER Y++
Sbjct: 361 ISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMMNGAFFNESGGQNERSYDQ 420
Query: 419 LDLIQARNGRYVGRMTRFAGTLPCRVGKKC 448
LD I A++G+YVG++T+FAGTL C VG C
Sbjct: 421 LDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 450
>Os06g0145100 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 348
Score = 561 bits (1445), Expect = e-160, Method: Compositional matrix adjust.
Identities = 257/349 (73%), Positives = 300/349 (85%), Gaps = 3/349 (0%)
Query: 100 TNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLR 159
TNPID CWRCR +WA+ RKRLA+C GFGH+ GG AGKIY+VTDA D+ +VIPR+GTLR
Sbjct: 3 TNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLR 62
Query: 160 HAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNL 219
+ VIQ+RP+WIVFAR M+I+L +ELIV +KTIDGRGAQVH+TGAQIT+Q V +VIIHN+
Sbjct: 63 YGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVIIHNV 122
Query: 220 HIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDITDGS 279
HIH+SVP GG+IRDS H+G+R SDGDGIS+M SSNIWIDHVSMSNCSDGLID GS
Sbjct: 123 HIHHSVPHGGGMIRDSKRHYGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDGLIDAVSGS 182
Query: 280 TAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVN 339
TAITISN HFTKHDHVMLFGA + +D++MQ+T+AFNHFGKGLV PRCRFGFFH+VN
Sbjct: 183 TAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGFFHVVN 239
Query: 340 NDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDLF 399
NDYTHWLMYAIGGNMNPTIISQGNRF A DD+ KEVTKREYT YDEYKEWVWKSQ D+
Sbjct: 240 NDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVM 299
Query: 400 LNGAFFNESGGRNERRYNRLDLIQARNGRYVGRMTRFAGTLPCRVGKKC 448
+NGAFFNESGG+NER Y++LD I A++G+YVG++T+FAGTL C VG C
Sbjct: 300 MNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC 348
>Os02g0214400 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment)
Length = 446
Score = 480 bits (1236), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/412 (56%), Positives = 284/412 (68%), Gaps = 4/412 (0%)
Query: 39 EEYWAKRSEVARSFNRAAYVSDPVAVLNRFNEDVLNXXXXXXXXXXXXXXXXXXXXGPCT 98
+E+W KR A + Y DP V N FN V+ GPC
Sbjct: 37 DEHWEKRRAAAEAAAEEVYKPDPFNVTNEFNHAVIRSTERGVLRRELSGKNSKYK-GPCL 95
Query: 99 VTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTL 158
TNPID CWRCRK+WA+ RKRLA+CAMGFG ATGG+ GKIY+VTD GD PR GTL
Sbjct: 96 ATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYGTL 155
Query: 159 RHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVT--GAQITVQAVSNVII 216
R +Q PLWI FA+SMVIRL +EL+V SDKTIDGRGAQVH+ GA ITVQ NVII
Sbjct: 156 RWGAMQAAPLWITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARGGAGITVQFARNVII 215
Query: 217 HNLHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDIT 276
+LH+H+ GG +RDS H G R +DGDGIS+ ++++W+DHVSMS C DGLID+
Sbjct: 216 TSLHVHDVKHSDGGAVRDSPTHIGPRTRADGDGISLFAATDVWVDHVSMSMCEDGLIDVV 275
Query: 277 DGSTAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFH 336
GST +TISNSHFT H+ VMLFGA D P+DK+MQ+T+AFNHFG+GLVQRMPRCR+GFFH
Sbjct: 276 QGSTGVTISNSHFTNHNDVMLFGASDSYPQDKVMQITVAFNHFGRGLVQRMPRCRWGFFH 335
Query: 337 MVNNDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQD 396
+VNNDYTHWLMYAIGG M+PTI+SQGNR+ A ++ K +T R Y E+K W W+S
Sbjct: 336 VVNNDYTHWLMYAIGGGMSPTILSQGNRYIAPPNIAAKLIT-RHYAPEWEWKNWAWRSDG 394
Query: 397 DLFLNGAFFNESGGRNERRYNRLDLIQARNGRYVGRMTRFAGTLPCRVGKKC 448
DLF+NGA+F S G R+ D+++ + G YV R+TRFAG L CR G+ C
Sbjct: 395 DLFMNGAYFQASNGAINRKVKGSDMVKPKPGSYVRRLTRFAGALSCRPGEPC 446
>Os06g0583900 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment)
Length = 448
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/417 (55%), Positives = 299/417 (71%), Gaps = 2/417 (0%)
Query: 33 GNITADEEYWAKRSEVARSFNRAAYVSDPVAVLNRFNEDVLNXXXXXXXXXXXXXXXXXX 92
NI +EYW KR +A + A Y DP V N FN V +
Sbjct: 33 ANIGEYDEYWQKRKLMADAAAEATYKRDPFEVTNSFNRAV-HRSEEESGRRELAMTKRKK 91
Query: 93 XXGPCTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVI 152
GPC TNPID CWRCR +W + RKRLA+CA GFG TGGLAGK Y+VTD D+ +
Sbjct: 92 FAGPCKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVEN 151
Query: 153 PRRGTLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVT-GAQITVQAV 211
PR GTLR VIQ+ PLWI+FA+ M+I L +E+++ SDKTIDGRGAQV +T GAQ+TVQ
Sbjct: 152 PRPGTLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNS 211
Query: 212 SNVIIHNLHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSDG 271
+NVIIHN+HIH+ + GG+IRDS HFG R +SDGDGIS+ GS+N+W+DH+S+SNC DG
Sbjct: 212 NNVIIHNIHIHDILQGKGGMIRDSPEHFGFRTQSDGDGISIFGSTNVWLDHLSLSNCQDG 271
Query: 272 LIDITDGSTAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCR 331
LID+ ST +TISN H T H+ VMLFG+ D +D+IMQ+T+AFNHFG+GLVQRMPRCR
Sbjct: 272 LIDVIAKSTGVTISNCHLTNHNDVMLFGSSDSFSEDQIMQITVAFNHFGRGLVQRMPRCR 331
Query: 332 FGFFHMVNNDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDEYKEWV 391
+GFFH+VNNDYTHWLMYAIGG+ NPTIISQGNR+ A ++ K +TK+ + +E+K WV
Sbjct: 332 WGFFHVVNNDYTHWLMYAIGGSKNPTIISQGNRYIAPPNLAAKRITKQLGATEEEWKNWV 391
Query: 392 WKSQDDLFLNGAFFNESGGRNERRYNRLDLIQARNGRYVGRMTRFAGTLPCRVGKKC 448
W S++DLF+ GA+F SGG +++++ DLI+ + G YV R+TRFAG++PC GK C
Sbjct: 392 WHSEEDLFMEGAYFTTSGGPIQKQFSNKDLIKPKPGSYVTRLTRFAGSIPCVAGKPC 448
>Os04g0137100 Similar to Pectate lyase (Fragment)
Length = 492
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/314 (59%), Positives = 231/314 (73%), Gaps = 1/314 (0%)
Query: 97 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 156
C NPID CWRC +W R+RLA C +GFG A GG GKIY+VTD D+ V P++G
Sbjct: 121 CGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKG 180
Query: 157 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVT-GAQITVQAVSNVI 215
TLR+AVI++ PLWIVF R MVI L +ELI+ S KTIDGRGA VH+ GA IT+Q V+NVI
Sbjct: 181 TLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVI 240
Query: 216 IHNLHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDI 275
IH LHIH+ P ++R S H+G R +DGD +S+ G+S+IW+DH S+SNC+DGLID
Sbjct: 241 IHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDA 300
Query: 276 TDGSTAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFF 335
GSTAIT+SN++FT H+ VML G D KDK MQVT+AFNHFG+GL+QRMPRCR G+F
Sbjct: 301 IMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYF 360
Query: 336 HMVNNDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQ 395
H+VNNDYTHW MYAIGG+ PTI SQGNR+ A + KEVTKR T+ +K W W+S+
Sbjct: 361 HVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSE 420
Query: 396 DDLFLNGAFFNESG 409
DL LNGAFF SG
Sbjct: 421 GDLLLNGAFFTPSG 434
>Os10g0457200 Virulence factor, pectin lyase fold family protein
Length = 446
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 232/347 (66%), Gaps = 3/347 (0%)
Query: 97 CTVTNPIDLCWRCR-KNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRR 155
C NPID CWRC +W R+RLA C +GFG A GG G +Y+VTD D V P
Sbjct: 69 CLTGNPIDHCWRCAGTDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAP 128
Query: 156 GTLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVT--GAQITVQAVSN 213
GTLR+ IQE PLWIVFA M IRL +EL+V S KTIDGRGA VHV GA IT+Q VSN
Sbjct: 129 GTLRYGAIQEGPLWIVFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAGGACITLQYVSN 188
Query: 214 VIIHNLHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLI 273
VIIHN+H+H+ VP +R S H+G R SDGDGIS+ + ++W+DH ++S C+DGLI
Sbjct: 189 VIIHNIHVHDCVPAGNANVRASPTHYGWRTRSDGDGISLYSARDVWVDHCALSRCADGLI 248
Query: 274 DITDGSTAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFG 333
D GSTAIT+SNS+F+ H+ VML G D D MQVT+AFNHFG LVQRMPRCR G
Sbjct: 249 DAIMGSTAITVSNSYFSHHNEVMLLGHSDGYLPDSAMQVTIAFNHFGIQLVQRMPRCRRG 308
Query: 334 FFHMVNNDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWK 393
+FH+VNNDYT W MYAIGG+ +PTI SQGNR+ A D KEVTKR T ++ W W+
Sbjct: 309 YFHIVNNDYTAWEMYAIGGSASPTINSQGNRYIAPADPNAKEVTKRVDTEEGQWAGWNWR 368
Query: 394 SQDDLFLNGAFFNESGGRNERRYNRLDLIQARNGRYVGRMTRFAGTL 440
++ D+ +NGAFF SG E Y++ ++ V ++T AG L
Sbjct: 369 TEGDMMVNGAFFVPSGEGLEAIYDKASSTDPKSSALVDQLTAGAGVL 415
>Os05g0293500 Similar to Pectate lyase B (Fragment)
Length = 373
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/356 (50%), Positives = 218/356 (61%), Gaps = 23/356 (6%)
Query: 97 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 156
C NPID CWRC WA R+RLA CA+GFG +A GG G++Y+V D GD+ P G
Sbjct: 37 CGTGNPIDDCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVNDTGDD-AARPAPG 95
Query: 157 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVT--GAQITVQAVSNV 214
TLR+ ++Q+ PLWIVFA M I A EL+V+S KT+DGRGA+V V GA V+ S+V
Sbjct: 96 TLRYGLVQDEPLWIVFAGDMTISPAHELVVSSRKTVDGRGARVVVGDGGACFAVRGASDV 155
Query: 215 IIHNLHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLID 274
+IH L I P G SDGDG V SS++W+DH ++ C+DGLID
Sbjct: 156 VIHGLTIRRCRPAPKLEA----------GMSDGDG--VHNSSDVWVDHCTVEACADGLID 203
Query: 275 ITDGSTAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGF 334
+ GST +T+SN+ HD +L G DD DK MQVT+AFN FG GLVQRMPRCRFG
Sbjct: 204 VVVGSTRVTLSNNLLRNHDKAILLGHNDDYTDDKAMQVTVAFNRFGPGLVQRMPRCRFGL 263
Query: 335 FHMVNNDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDE-YKEWVWK 393
FH++NNDY W YAIGG+ +PTIIS GNRF A DM KEVTKR+ + + W W
Sbjct: 264 FHVINNDYIAWQKYAIGGSASPTIISHGNRFYA--DMA-KEVTKRDDDVPESVWHHWNWV 320
Query: 394 SQDDLFLNGAFFNESGGRNERRYNRLDLIQ-ARNGRYVGRMTRFAGTLPCRVGKKC 448
S DL LNGAFF SG E R + L AR+ V MT AG L C+ G C
Sbjct: 321 SDGDLMLNGAFFRASG---EARTDNLKAPSFARSAPSVPSMTSSAGALSCKEGSHC 373
>Os08g0286100
Length = 384
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/364 (43%), Positives = 202/364 (55%), Gaps = 11/364 (3%)
Query: 95 GPCTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHK--ATGGLAGKIYIVTDAGDEHLVI 152
G T N ID CWR ++NWA+ R+RLA C++GF K G Y VTD D+ V
Sbjct: 22 GVATAANVIDRCWRGQRNWAADRQRLAVCSVGFAGKMRQNRGAGVVAYTVTDPSDD-PVR 80
Query: 153 PRRGTLRH-AVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVTG-AQITVQA 210
PR GTLR+ A + +WI FAR M IRLA+ L V + TIDGRGA VHV G A I +
Sbjct: 81 PRPGTLRYGATVLPAKVWITFARDMRIRLAQPLYVKNFTTIDGRGADVHVAGGAGIVLYH 140
Query: 211 VSNVIIHNLHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSD 270
+VI+H LH+H+ + G + G DGD I ++ SS +WIDH ++S C D
Sbjct: 141 ARDVIVHGLHVHDCRAQPPGRVVVPGGAVQPSGSGDGDAIRLVASSKVWIDHNTLSRCED 200
Query: 271 GLIDITDGSTAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRC 330
GL+D+T GST +T+SN+ F HD VML G D D+ M+VT+AFN FG + QRMPR
Sbjct: 201 GLLDVTVGSTDVTVSNNWFHDHDKVMLLGHDDGFTTDRRMRVTVAFNRFGPNVNQRMPRI 260
Query: 331 RFGFFHMVNNDYTHWLMYAIGGNMNPTIISQGNRFRASDDM-KLKEVTKR-----EYTSY 384
R G+ H+VNN Y W YAIGG+M P++ SQGN F AS K+VT+R
Sbjct: 261 RHGYAHVVNNLYDGWRDYAIGGSMGPSVKSQGNLFAASGGAGDNKKVTRRMPAVARGGGG 320
Query: 385 DEYKEWVWKSQDDLFLNGAFFNESGGRNERRYNRLDLIQARNGRYVGRMTRFAGTLPCRV 444
+W S D F NGAFF + G R YNR A + V +T G L C
Sbjct: 321 GGKDQWHLHSVGDAFENGAFFRQVGNRVRPNYNRHQAFSAASAGDVRALTGGVGALTCSA 380
Query: 445 GKKC 448
C
Sbjct: 381 TAAC 384
>Os01g0546800 Virulence factor, pectin lyase fold family protein
Length = 364
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 150/289 (51%), Gaps = 28/289 (9%)
Query: 118 KRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMV 177
+ LA A GFG +A GGL G +Y VT D+ GTLR A PLWIVF S
Sbjct: 51 RALAGAAEGFGRRAIGGLHGPLYRVTSLDDDG-----HGTLRQACRAHGPLWIVFDVSGD 105
Query: 178 IRLAKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMH 237
I L L VTS KTIDGRG +V + G + ++ +VI+ NL I
Sbjct: 106 IHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIE--------------- 150
Query: 238 HFGIRGESDGDGISVMGSS-NIWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVM 296
G RG D D I + SS +IWID S+++C DGL+DIT GST +T+S F++HD M
Sbjct: 151 --GGRGH-DVDAIQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTM 207
Query: 297 LFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNP 356
L GA D+ ++VT+ F G QR PR RFG H+ NN W +YA+ +
Sbjct: 208 LVGADPSHTGDRGIRVTVHHCFF-DGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEA 266
Query: 357 TIISQGNRFRASDDMK--LKEVTKREYTSYDEYKEWVWKSQDDLFLNGA 403
+ SQ N + A + K + V +R + WV +S+ D FLNGA
Sbjct: 267 QVASQCNVYEAGAERKAVFRYVPERAADREEAEAGWV-RSEGDAFLNGA 314
>Os01g0837100
Length = 343
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 137/266 (51%), Gaps = 28/266 (10%)
Query: 139 IYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQ 198
+ ++ D GD G+LR + PLWIVF S I L+ L V+S KTIDGRG +
Sbjct: 33 LRVMADDGD--------GSLREGCRRREPLWIVFDVSGTIHLSTGLRVSSYKTIDGRGQR 84
Query: 199 VHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVM-GSSN 257
V ++G + ++ +VI+ NL + G RG D D ++V GS +
Sbjct: 85 VTLSGKGLQLRECEHVIVCNLEVE-----------------GCRGH-DADAVAVKPGSRH 126
Query: 258 IWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFN 317
+WID + C DGL+D+T GST +T+S F+ HD +L G +D+ ++VT+
Sbjct: 127 VWIDRCGLRGCGDGLLDVTRGSTDVTVSRCRFSAHDKAVLIGGSAGHVEDRAIRVTIHHC 186
Query: 318 HFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVT 377
F G QR PR RFG H+ NN W +YA+ ++ I+SQ N + A + K+ +
Sbjct: 187 LF-DGTRQRHPRVRFGRVHLYNNYTRGWGIYAVCASVESQIVSQCNIYEAGEKKKVFKYM 245
Query: 378 KREYTSYDEYKEWVWKSQDDLFLNGA 403
+ D+ +S+ DLFLNGA
Sbjct: 246 IEQAADRDQSSTGFIRSEGDLFLNGA 271
>AK060609
Length = 103
Score = 86.7 bits (213), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/102 (47%), Positives = 61/102 (59%)
Query: 347 MYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDLFLNGAFFN 406
MYAIGG+ PTI S+GNR+ A + KEVTKR T+ +K W W+S+ DL LNGAFF
Sbjct: 2 MYAIGGSAEPTINSRGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFT 61
Query: 407 ESGGRNERRYNRLDLIQARNGRYVGRMTRFAGTLPCRVGKKC 448
SG Y+R + A++ VG +T AG L CR G C
Sbjct: 62 PSGAGASASYSRASSLGAKSSSMVGTITSGAGALSCRGGSAC 103
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,202,505
Number of extensions: 635079
Number of successful extensions: 1141
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1115
Number of HSP's successfully gapped: 12
Length of query: 448
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 344
Effective length of database: 11,605,545
Effective search space: 3992307480
Effective search space used: 3992307480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)