BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0489200 Os05g0489200|AK069135
(210 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0489200 Plant lipid transfer/seed storage/trypsin-alph... 209 1e-54
Os01g0814100 Similar to Bindin (Fragment) 133 7e-32
Os03g0323900 Peptidase, trypsin-like serine and cysteine do... 91 8e-19
Os03g0192600 Plant lipid transfer protein/Par allergen fami... 82 3e-16
Os07g0175000 Plant lipid transfer protein/Par allergen fami... 77 7e-15
Os07g0174900 Plant lipid transfer protein/Par allergen fami... 76 2e-14
Os07g0174400 Plant lipid transfer protein/Par allergen fami... 74 8e-14
Os03g0794000 Plant lipid transfer protein/Par allergen fami... 69 3e-12
Os07g0175600 Plant lipid transfer protein/Par allergen fami... 65 3e-11
>Os05g0489200 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
domain containing protein
Length = 210
Score = 209 bits (531), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 116/210 (55%)
Query: 1 MAAQRRWPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQACLTALLNMS 60
MAAQRRWP DQACLTALLNMS
Sbjct: 1 MAAQRRWPTSTLAAVAVAVVVLLAASAATTAEAQSAPAAAPGPAGPVLDQACLTALLNMS 60
Query: 61 DCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAVDYSRALALPAI 120
DCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAVDYSRALALPAI
Sbjct: 61 DCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAVDYSRALALPAI 120
Query: 121 CRVSTPPVSTCAAFGFNVPMXXXXXXXXXXXXXXXXXXQFPGXXXXXXXXXXXXXXXXXX 180
CRVSTPPVSTCAAFGFNVPM QFPG
Sbjct: 121 CRVSTPPVSTCAAFGFNVPMGPTPSPSPAAVSPSGEGPQFPGTSPFASPPSTATPSTNAA 180
Query: 181 XXGRSGDHLXXXXXXXXXXXXXXXXMFRIV 210
GRSGDHL MFRIV
Sbjct: 181 AAGRSGDHLVAVGVAIAAAAVVVAGMFRIV 210
>Os01g0814100 Similar to Bindin (Fragment)
Length = 187
Score = 133 bits (335), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 73/90 (81%)
Query: 51 ACLTALLNMSDCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAVD 110
AC+ A+LNMSDCLTYV NGS AR+PD+PCCPELAGL+ES PVCLC+LL+G SY I+VD
Sbjct: 44 ACMDAVLNMSDCLTYVMNGSTARKPDEPCCPELAGLLESKPVCLCQLLAGGASSYDISVD 103
Query: 111 YSRALALPAICRVSTPPVSTCAAFGFNVPM 140
Y RA+ALP IC ++ PPV+ CA G VPM
Sbjct: 104 YKRAMALPGICGLAAPPVTACALLGVPVPM 133
>Os03g0323900 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 199
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 52 CLTALLNMSDCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAVDY 111
C ALLN+S CLTYV+ S RPDK CC LAG+V+ CLC L+ G G +YG+ VD
Sbjct: 52 CTGALLNLSSCLTYVEYRSTLTRPDKGCCGALAGVVDGEAACLCGLVGGYG-AYGVRVDA 110
Query: 112 SRALALPAICRVSTPPVSTCAAFGFNV 138
RALALP ICRV PP CAA G V
Sbjct: 111 VRALALPTICRVDAPPPRLCAALGVPV 137
>Os03g0192600 Plant lipid transfer protein/Par allergen family protein
Length = 211
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 52 CLTALLNMSDCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAVDY 111
C ALL+++ CL+YVQ GS +PD PCC L G+V+ CLC+ G+ ++G+ ++
Sbjct: 53 CTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGS-QNFGVTLNM 111
Query: 112 SRALALPAICRVSTPPVSTC 131
++AL LPA C+V TPP S C
Sbjct: 112 TKALQLPAACKVKTPPFSKC 131
>Os07g0175000 Plant lipid transfer protein/Par allergen family protein
Length = 181
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 49 DQACLTALLNMSDCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIA 108
+ C + ++ +S CL Y+ ++ P+ CC LAG+V+S+P CLC +L G+ S+GI+
Sbjct: 34 NNGCSSVMMTLSPCLDYISG--KSPIPEFTCCTTLAGVVQSDPRCLCMVLDGSAASFGIS 91
Query: 109 VDYSRALALPAICRVSTPPVSTC 131
++++RAL LP +C+V PP+S C
Sbjct: 92 INHTRALELPGVCKVQAPPISQC 114
>Os07g0174900 Plant lipid transfer protein/Par allergen family protein
Length = 171
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 49 DQACLTALLNMSDCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIA 108
C + +++++ CL Y+Q A RP CC L+ +V+S P CLC +L G S G+
Sbjct: 28 QSGCTSEMVSLAPCLDYMQG--NASRPTASCCAALSSVVKSRPECLCAVLGGGASSLGVT 85
Query: 109 VDYSRALALPAICRVSTPPVSTCAAFGFNVP 139
V+ +RAL LPA C V TPP S C+ G +P
Sbjct: 86 VNTTRALELPAACGVKTPPPSECSKVGAPIP 116
>Os07g0174400 Plant lipid transfer protein/Par allergen family protein
Length = 131
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 52 CLTALLNMSDCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAVDY 111
C+T +++++ CL Y+ S A +P CC L+ +V S P CLC +L G S G+ ++
Sbjct: 39 CMTEIISLASCLGYMSGNSSAPKPS--CCTALSSVVTSKPACLCAVLGGGASSLGVTINN 96
Query: 112 SRALALPAICRVSTPPVSTC 131
+RAL LPA C V TPP S C
Sbjct: 97 TRALELPAACNVKTPPASQC 116
>Os03g0794000 Plant lipid transfer protein/Par allergen family protein
Length = 189
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 50 QACLTALLNMSDCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAV 109
C+ L+++S C+ Y+ A P CC L+G++ S+P CLC +L G S G+AV
Sbjct: 45 SGCMPELVSLSPCMGYMSG--NATAPAAACCSALSGVLRSSPRCLCMVLGGTAASLGVAV 102
Query: 110 DYSRALALPAICRVSTPPVSTCAAFGFNV 138
D +RA LP C V PP S C A G V
Sbjct: 103 DTARAALLPGACSVQAPPASQCNAAGVPV 131
>Os07g0175600 Plant lipid transfer protein/Par allergen family protein
Length = 170
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 52 CLTALLNMSDCLTYVQNGSRARRPDKPCCPELAGLVESNPVCLCELLSGAGDSYGIAVDY 111
C LL+MS CL Y+ A P CC +L +V+S P CLC L+ + G++++
Sbjct: 35 CTQTLLSMSPCLNYLTGNETA--PSASCCGKLGEVVKSQPECLCVALNADTAALGLSINR 92
Query: 112 SRALALPAICRVSTPPVSTC 131
+RAL LP C+V TPPVS C
Sbjct: 93 TRALGLPDACKVQTPPVSNC 112
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.138 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,211,885
Number of extensions: 132523
Number of successful extensions: 455
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 456
Number of HSP's successfully gapped: 11
Length of query: 210
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 114
Effective length of database: 12,023,257
Effective search space: 1370651298
Effective search space used: 1370651298
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 154 (63.9 bits)