Os03g0192600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os03g0192600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.19 | 0.568 | 10.2 | -0.932 | 0.591 | -1.39 | 1.1 | -0.0309 | -1.18 | 4.3 | 64.98 | 628 | -- | -- |
| 146.19 | 0.563 | 10.2 | -0.936 | 0.584 | -1.39 | 1.09 | -- | -1.18 | 4.31 | 65 | 631 | -- | -- |
| 149.03 | 0.569 | 10.2 | -0.958 | 0.568 | -1.29 | -- | 0.308 | -1.19 | 3.86 | 65.99 | 624 | -- | -- |
| 149.22 | 0.569 | 10.2 | -0.939 | 0.553 | -1.28 | -- | -- | -1.18 | 3.81 | 66 | 631 | -- | -- |
| 153.62 | 0.577 | 10.2 | -0.977 | -- | -1.28 | -- | 0.241 | -1.16 | -- | 60.95 | 879 | -- | -- |
| 171.26 | 0.614 | 10.2 | -0.93 | 0.603 | -- | -0.0149 | -- | -1.09 | 22.7 | -- | -- | -- | -- |
| 171.26 | 0.613 | 10.2 | -0.929 | 0.603 | -- | -- | -- | -1.09 | 22.7 | -- | -- | -- | -- |
| 153.69 | 0.577 | 10.2 | -0.957 | -- | -1.27 | -- | -- | -1.15 | -- | 59.82 | 880 | -- | -- |
| 172.18 | 0.611 | 10.2 | -- | 0.568 | -1.25 | -- | -- | -1.09 | 3.74 | 68.92 | 604 | -- | -- |
| 193.71 | 0.65 | 10.2 | -0.917 | -- | -- | -- | -- | -1.09 | -- | -- | -- | -- | -- |
| 194.01 | 0.652 | 10.2 | -- | 0.597 | -- | -- | -- | -0.987 | 22.6 | -- | -- | -- | -- |
| 176.91 | 0.619 | 10.2 | -- | -- | -1.22 | -- | -- | -1.09 | -- | 68.01 | 861 | -- | -- |
| 215.91 | 0.686 | 10.2 | -- | -- | -- | -- | -- | -0.985 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.36 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 13 | 141.75 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 14 | 141.97 | wind | 3.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 15 | 142.04 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 17 | 142.11 | humidity | 80.0 | 720 | > th | dose independent | rect. | 5 | 11 |
| 22 | 142.63 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 23 | 142.66 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 24 | 142.77 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 33 | 142.82 | humidity | 80.0 | 720 | < th | dose independent | rect. | 6 | 15 |
| 40 | 143.01 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 42 | 143.01 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 5 | 12 |
| 46 | 143.09 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 4 | 14 |
| 65 | 143.44 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 16 | 17 |
| 66 | 143.45 | wind | 5.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 87 | 143.53 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 92 | 143.61 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 4 | 16 |
| 115 | 143.76 | humidity | 80.0 | 720 | < th | dose independent | sin | 0 | NA |
| 120 | 143.79 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 123 | 143.82 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 126 | 143.83 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 130 | 143.85 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 136 | 143.85 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 22 | 12 |
| 160 | 143.92 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 163 | 143.97 | humidity | 80.0 | 720 | > th | dose independent | sin | 1 | NA |
| 167 | 144.02 | radiation | 30.0 | 720 | < th | dose independent | rect. | 14 | 17 |
| 178 | 144.15 | radiation | 40.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 188 | 144.23 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 13 | 21 |
| 223 | 144.36 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 14 | 18 |
| 247 | 144.51 | radiation | 40.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 252 | 144.51 | humidity | 70.0 | 720 | > th | dose dependent | sin | 1 | NA |
| 332 | 144.59 | radiation | 40.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 333 | 144.59 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 360 | 144.66 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 366 | 144.68 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 377 | 144.70 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 378 | 144.71 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 400 | 144.73 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 402 | 144.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 404 | 144.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 406 | 144.76 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 415 | 144.81 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 441 | 144.86 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 493 | 144.95 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 494 | 144.96 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 513 | 145.04 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 538 | 145.13 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 539 | 145.13 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 543 | 145.14 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 559 | 145.16 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 22 |
| 598 | 145.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 612 | 145.27 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 636 | 145.32 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 703 | 145.42 | radiation | 40.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 762 | 145.52 | radiation | 10.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 768 | 145.54 | temperature | 25.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 794 | 145.61 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 11 |
| 834 | 145.66 | radiation | 40.0 | 14400 | > th | dose dependent | no | NA | NA |
| 836 | 145.66 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 979 | 145.67 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |