BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0192600 Os03g0192600|AK105970
(211 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64080.1 | chr5:25645475-25646638 REVERSE LENGTH=183 99 2e-21
AT2G13820.1 | chr2:5774295-5776279 REVERSE LENGTH=170 98 3e-21
AT4G14815.1 | chr4:8505122-8505760 FORWARD LENGTH=157 75 4e-14
AT2G48130.1 | chr2:19685263-19685977 REVERSE LENGTH=184 74 5e-14
AT3G22600.1 | chr3:8006711-8007397 REVERSE LENGTH=171 74 5e-14
AT3G43720.1 | chr3:15615549-15617099 REVERSE LENGTH=194 66 1e-11
AT5G09370.1 | chr5:2909450-2910475 REVERSE LENGTH=159 65 2e-11
AT1G36150.1 | chr1:13528257-13529470 FORWARD LENGTH=257 65 4e-11
AT2G27130.1 | chr2:11595379-11596395 FORWARD LENGTH=177 62 1e-10
AT4G08670.1 | chr4:5536765-5538210 REVERSE LENGTH=209 60 9e-10
AT1G03103.1 | chr1:747219-747955 FORWARD LENGTH=172 57 5e-09
AT2G44290.1 | chr2:18305418-18306202 REVERSE LENGTH=206 56 1e-08
AT1G55260.1 | chr1:20614663-20616158 FORWARD LENGTH=228 54 4e-08
AT2G44300.1 | chr2:18307468-18308286 REVERSE LENGTH=205 54 7e-08
AT1G73890.1 | chr1:27787903-27788658 REVERSE LENGTH=194 47 7e-06
>AT5G64080.1 | chr5:25645475-25646638 REVERSE LENGTH=183
Length = 182
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQNFGVTLNM 111
DC+ +L++A CLS+V G TVAKP+ CCSGLK V+K + CLC+AF+ S + GVTLN+
Sbjct: 42 DCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNI 101
Query: 112 TKALQLPAACKVKTPPFSKCHLSI 135
TKA LPAACK+ P + C LS+
Sbjct: 102 TKASTLPAACKLHAPSIATCGLSV 125
>AT2G13820.1 | chr2:5774295-5776279 REVERSE LENGTH=170
Length = 169
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 62/86 (72%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQNFGVTLNM 111
DC+ +L++A CLS+V GSTV KP+ CCSGLK VV+ CLC+AF+ S + G+TL++
Sbjct: 26 DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85
Query: 112 TKALQLPAACKVKTPPFSKCHLSIPG 137
+KA LP+ CKV PP ++C LS+ G
Sbjct: 86 SKAASLPSVCKVAAPPSARCGLSVSG 111
>AT4G14815.1 | chr4:8505122-8505760 FORWARD LENGTH=157
Length = 156
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGS-QNFGVTLN 110
CT+ L+S+A CLS++ + +++ P CC+ L VV+ CLCQ G G+ +N
Sbjct: 25 SCTNVLISMAPCLSFITQNTSL--PSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGINVN 82
Query: 111 MTKALQLPAACKVKTPPFSKCH 132
T+AL LP AC V+TPP S+CH
Sbjct: 83 ETQALALPKACHVETPPASRCH 104
>AT2G48130.1 | chr2:19685263-19685977 REVERSE LENGTH=184
Length = 183
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGS-QNFGVTLN 110
C L +L+ CLSY+ ST P PCCS L V+K C+C A N G+ +N
Sbjct: 29 SCVSTLTTLSPCLSYITGNSTT--PSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGLNIN 86
Query: 111 MTKALQLPAACKVKTPPFSKCH 132
T+ALQLP AC ++TPP ++C+
Sbjct: 87 RTQALQLPNACNIQTPPLTQCN 108
>AT3G22600.1 | chr3:8006711-8007397 REVERSE LENGTH=171
Length = 170
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 53 CTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGS-QNFGVTLNM 111
CT+AL+S++ CL+Y+ ST P+ CC+ L VV+ CLCQ G G+ +N
Sbjct: 28 CTNALISMSPCLNYITGNST--SPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQ 85
Query: 112 TKALQLPAACKVKTPPFSKCH 132
T+AL LP AC V+TPP S+C+
Sbjct: 86 TQALGLPRACNVQTPPVSRCN 106
>AT3G43720.1 | chr3:15615549-15617099 REVERSE LENGTH=194
Length = 193
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 52 DCTDALLSLAGCLSYVQ--EGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQG--SQNFGV 107
DC L+++ GCLSYV EG AKPD CC L G+V+ CLC G + G+
Sbjct: 37 DCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGI 96
Query: 108 TLNMTKALQLPAACKVKTPPFSKCHL 133
++ KAL+LP C V TP S C L
Sbjct: 97 KIDKAKALKLPGVCGVITPDPSLCSL 122
>AT5G09370.1 | chr5:2909450-2910475 REVERSE LENGTH=159
Length = 158
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQNFGVTLNM 111
DC +++L CL ++ G T P A CCS LK ++ + CLC+ + + G+ LN+
Sbjct: 27 DCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCEGLKKAP-LGIKLNV 85
Query: 112 TKALQLPAACKVKTPPFSKCH 132
TK+ LP ACK+ PP S C
Sbjct: 86 TKSATLPVACKLNAPPVSACD 106
>AT1G36150.1 | chr1:13528257-13529470 FORWARD LENGTH=257
Length = 256
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQNFGVTLNM 111
DC+ + S+ CLS++ GST P CC G+K V+ CLC A + S+ G L+
Sbjct: 44 DCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMGFVLDD 103
Query: 112 TKALQLPAACKVKTPPFSKCHLSIPG 137
TKAL +P C V P C +S P
Sbjct: 104 TKALAMPKICNVPIDP--NCDVSTPA 127
>AT2G27130.1 | chr2:11595379-11596395 FORWARD LENGTH=177
Length = 176
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQG--SQNFGVTL 109
+C ++L+++ C SYVQ GS KP+A CC L G+V+ C+C + G S FGV L
Sbjct: 39 NCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKL 98
Query: 110 NMTKALQLPAACKVKTPPFSKCHL 133
+ +A QL C VK P S C +
Sbjct: 99 DKQRAEQLSTICGVKAPSPSLCSV 122
>AT4G08670.1 | chr4:5536765-5538210 REVERSE LENGTH=209
Length = 208
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQNFGVTLNM 111
DC+ + S+ CL Y+ GS KP+ CC+G++ V++ C+C + G+ LN
Sbjct: 47 DCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSAGEMGIELNS 106
Query: 112 TKALQLPAACKVKTPP 127
T+AL P ACK+ P
Sbjct: 107 TRALATPKACKLSIAP 122
>AT1G03103.1 | chr1:747219-747955 FORWARD LENGTH=172
Length = 171
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 53 CTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQN--FGVTLN 110
C D L SL+ CL Y+ GS + P CC VV+ CLC +++ +G N
Sbjct: 25 CRDTLTSLSPCLYYLNGGS--SSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYGFKFN 82
Query: 111 MTKALQLPAACKVKTPPFSKCH 132
T AL LP AC V+TP S C+
Sbjct: 83 RTLALNLPTACNVQTPSPSLCN 104
>AT2G44290.1 | chr2:18305418-18306202 REVERSE LENGTH=206
Length = 205
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQ--GSQNFGVTL 109
+CT L+ +A CL YVQ + PD CCSGLK V+ ++ CLC Q + G+ +
Sbjct: 35 ECTAQLVGMATCLPYVQGKAKSPTPD--CCSGLKQVINSDMKCLCMIIQERNDPDLGLQV 92
Query: 110 NMTKALQLPAACKVKTPPFSKC 131
N++ AL LP+ C T +KC
Sbjct: 93 NVSLALALPSVCHA-TADITKC 113
>AT1G55260.1 | chr1:20614663-20616158 FORWARD LENGTH=228
Length = 227
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQN--FGVTL 109
+CT+ L+ L+ C+ YV G P CC+G V++K C+C + + G+ +
Sbjct: 75 ECTNQLIELSTCIPYV--GGDAKAPTKDCCAGFGQVIRKSEKCVCILVRDKDDPQLGIKI 132
Query: 110 NMTKALQLPAACKVKTPPFSKC 131
N T A LP+AC + P + C
Sbjct: 133 NATLAAHLPSACHITAPNITDC 154
>AT2G44300.1 | chr2:18307468-18308286 REVERSE LENGTH=205
Length = 204
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 52 DCTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQ--NFGVTL 109
+CT+ L+ +A CL YVQ + PD CCSGLK V+ CLC Q + G+ +
Sbjct: 34 ECTEQLVGMATCLPYVQGQAKSPTPD--CCSGLKQVLNSNKKCLCVIIQDRNDPDLGLQI 91
Query: 110 NMTKALQLPAACK 122
N++ AL LP+ C
Sbjct: 92 NVSLALALPSVCH 104
>AT1G73890.1 | chr1:27787903-27788658 REVERSE LENGTH=194
Length = 193
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 53 CTDALLSLAGCLSYVQEGSTVAKPDAPCCSGLKGVVKKEVACLCQAFQGSQNF--GVTLN 110
C LLSLA C +VQ + + P PCC L + +E CLC + +N
Sbjct: 30 CASRLLSLAPCGPFVQGFAQL--PAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPIN 87
Query: 111 MTKALQLPAACKVKTPPFSKCHLSIPG 137
T ALQLP C + S C S PG
Sbjct: 88 QTLALQLPPLCNIPANS-STCSSSFPG 113
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.130 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,208,030
Number of extensions: 66367
Number of successful extensions: 169
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 164
Number of HSP's successfully gapped: 16
Length of query: 211
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 117
Effective length of database: 8,529,465
Effective search space: 997947405
Effective search space used: 997947405
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)