Os07g0175000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os07g0175000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 309.53 | 0.827 | 3.24 | -0.0946 | 0.19 | 0.588 | -0.636 | -4.51 | 0.11 | 6.27 | 7.5 | 114 | -- | -- |
| 311.21 | 0.822 | 3.26 | -0.0957 | 0.216 | 1.52 | -0.58 | -- | 0.114 | 6.54 | 7.599 | 41 | -- | -- |
| 309.77 | 0.82 | 3.23 | -0.0893 | 0.222 | 0.433 | -- | -4.5 | 0.124 | 8.18 | 7.5 | 113 | -- | -- |
| 311.32 | 0.822 | 3.26 | -0.0791 | 0.214 | 1.48 | -- | -- | 0.104 | 8.3 | 7.608 | 41 | -- | -- |
| 312.24 | 0.823 | 3.24 | -0.115 | -- | 0.404 | -- | -4.87 | 0.111 | -- | 7.681 | 113 | -- | -- |
| 322.43 | 0.842 | 3.27 | -0.224 | 0.218 | -- | -0.0813 | -- | 0.0506 | 9.69 | -- | -- | -- | -- |
| 322.45 | 0.841 | 3.27 | -0.227 | 0.217 | -- | -- | -- | 0.0506 | 9.79 | -- | -- | -- | -- |
| 313.81 | 0.825 | 3.27 | -0.0758 | -- | 1.47 | -- | -- | 0.109 | -- | 7.6 | 41 | -- | -- |
| 311.47 | 0.822 | 3.26 | -- | 0.212 | 1.51 | -- | -- | 0.115 | 8.32 | 7.6 | 41 | -- | -- |
| 325.27 | 0.843 | 3.28 | -0.229 | -- | -- | -- | -- | 0.0508 | -- | -- | -- | -- | -- |
| 323.81 | 0.842 | 3.27 | -- | 0.218 | -- | -- | -- | 0.0759 | 9.87 | -- | -- | -- | -- |
| 313.95 | 0.825 | 3.26 | -- | -- | 1.5 | -- | -- | 0.116 | -- | 7.6 | 41 | -- | -- |
| 326.66 | 0.844 | 3.27 | -- | -- | -- | -- | -- | 0.0762 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 302.60 | wind | 7.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 2 | 302.89 | wind | 9.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 3 | 303.09 | wind | 5.0 | 90 | > th | dose dependent | rect. | 11 | 3 |
| 6 | 303.27 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 7 | 303.36 | wind | 9.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 8 | 303.42 | wind | 7.0 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 15 | 303.67 | wind | 9.0 | 270 | < th | dose independent | sin | 8 | NA |
| 16 | 303.68 | wind | 9.0 | 270 | > th | dose independent | sin | 8 | NA |
| 22 | 304.07 | wind | 5.0 | 90 | > th | dose dependent | rect. | 22 | 16 |
| 29 | 304.21 | wind | 9.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 36 | 304.39 | wind | 7.0 | 90 | > th | dose independent | rect. | 11 | 3 |
| 51 | 304.69 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 53 | 304.72 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 9 | 6 |
| 79 | 305.05 | wind | 9.0 | 10 | > th | dose independent | rect. | 11 | 3 |
| 120 | 305.27 | wind | 5.0 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 125 | 305.32 | wind | 9.0 | 10 | < th | dose independent | sin | 3 | NA |
| 234 | 305.68 | humidity | 90.0 | 270 | > th | dose independent | rect. | 9 | 7 |
| 239 | 305.70 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 339 | 306.16 | humidity | 80.0 | 270 | > th | dose independent | rect. | 9 | 2 |
| 389 | 306.37 | wind | 9.0 | 90 | < th | dose independent | sin | 3 | NA |
| 470 | 306.66 | wind | 9.0 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 485 | 306.71 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 2 |
| 486 | 306.71 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 528 | 306.91 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 14 |
| 638 | 307.13 | humidity | 80.0 | 90 | > th | dose independent | rect. | 10 | 20 |
| 722 | 307.39 | wind | 9.0 | 10 | > th | dose independent | sin | 4 | NA |
| 740 | 307.42 | wind | 9.0 | 90 | > th | dose independent | sin | 4 | NA |
| 751 | 307.42 | wind | 7.0 | 30 | > th | dose dependent | sin | 2 | NA |