Os07g0175600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os07g0175600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 255.06 | 0.75 | 6.64 | 1.05 | 1.35 | -2.68 | -0.608 | -0.544 | 0.446 | 1.95 | 0.5788 | 1547 | -- | -- |
| 255.08 | 0.744 | 6.64 | 1.03 | 1.36 | -2.58 | -0.686 | -- | 0.448 | 1.96 | 0.6516 | 1552 | -- | -- |
| 256.15 | 0.745 | 6.64 | 1.13 | 1.38 | -2.72 | -- | -0.943 | 0.443 | 1.9 | 0.6238 | 1552 | -- | -- |
| 257.02 | 0.747 | 6.64 | 1.04 | 1.35 | -2.57 | -- | -- | 0.449 | 1.94 | 0.6393 | 1552 | -- | -- |
| 315.45 | 0.827 | 6.61 | 1.18 | -- | -1.73 | -- | -0.922 | 0.515 | -- | 0.4401 | 7090 | -- | -- |
| 309.43 | 0.825 | 6.57 | 1.57 | 0.817 | -- | -0.544 | -- | 0.745 | 2.81 | -- | -- | -- | -- |
| 310.45 | 0.825 | 6.57 | 1.58 | 0.816 | -- | -- | -- | 0.748 | 2.84 | -- | -- | -- | -- |
| 313.44 | 0.825 | 6.62 | 1.13 | -- | -1.47 | -- | -- | 0.522 | -- | 0.4661 | 7071 | -- | -- |
| 282.27 | 0.782 | 6.65 | -- | 1.48 | -3.15 | -- | -- | 0.298 | 1.89 | 0.6726 | 1552 | -- | -- |
| 348.95 | 0.873 | 6.57 | 1.62 | -- | -- | -- | -- | 0.769 | -- | -- | -- | -- | -- |
| 376.65 | 0.908 | 6.61 | -- | 0.847 | -- | -- | -- | 0.572 | 2.85 | -- | -- | -- | -- |
| 344.62 | 0.865 | 6.59 | -- | -- | -1.78 | -- | -- | 0.437 | -- | 0.5432 | 7106 | -- | -- |
| 418.14 | 0.954 | 6.61 | -- | -- | -- | -- | -- | 0.589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 238.70 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 3 | 239.83 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 6 | 240.87 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 8 | 242.19 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 12 | 243.10 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 15 | 243.99 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 18 | 244.18 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 21 | 244.57 | humidity | 90 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 22 | 244.58 | radiation | 30 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 24 | 244.83 | wind | 1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 25 | 244.88 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 26 | 244.88 | wind | 1 | 43200 | < th | dose dependent | rect. | 15 | 13 |
| 27 | 245.01 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 28 | 245.02 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 31 | 245.05 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 55 | 245.57 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 57 | 245.66 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 82 | 245.88 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 84 | 245.96 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 96 | 246.50 | radiation | 40 | 43200 | > th | dose independent | sin | 8 | NA |
| 114 | 246.84 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 117 | 246.87 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 119 | 246.92 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 123 | 246.99 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 148 | 247.19 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 150 | 247.23 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 182 | 247.59 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 191 | 247.72 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 234 | 248.12 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 9 |
| 334 | 248.37 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 472 | 248.39 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 563 | 248.73 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 578 | 248.81 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 686 | 249.06 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 698 | 249.15 | radiation | 40 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 709 | 249.16 | radiation | 40 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 714 | 249.17 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 741 | 249.29 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 743 | 249.32 | radiation | 30 | 43200 | > th | dose dependent | sin | 5 | NA |
| 753 | 249.37 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 893 | 249.72 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 10 |