BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0175600 Os07g0175600|AK104966
(170 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22600.1 | chr3:8006711-8007397 REVERSE LENGTH=171 108 2e-24
AT2G48130.1 | chr2:19685263-19685977 REVERSE LENGTH=184 99 1e-21
AT4G14815.1 | chr4:8505122-8505760 FORWARD LENGTH=157 92 1e-19
AT1G03103.1 | chr1:747219-747955 FORWARD LENGTH=172 86 1e-17
AT1G55260.1 | chr1:20614663-20616158 FORWARD LENGTH=228 66 8e-12
AT3G43720.1 | chr3:15615549-15617099 REVERSE LENGTH=194 65 2e-11
AT2G13820.1 | chr2:5774295-5776279 REVERSE LENGTH=170 64 3e-11
AT5G09370.1 | chr5:2909450-2910475 REVERSE LENGTH=159 63 8e-11
AT4G08670.1 | chr4:5536765-5538210 REVERSE LENGTH=209 61 2e-10
AT5G64080.1 | chr5:25645475-25646638 REVERSE LENGTH=183 60 6e-10
AT2G44300.1 | chr2:18307468-18308286 REVERSE LENGTH=205 56 9e-09
AT1G36150.1 | chr1:13528257-13529470 FORWARD LENGTH=257 55 2e-08
AT2G44290.1 | chr2:18305418-18306202 REVERSE LENGTH=206 53 8e-08
AT1G27950.1 | chr1:9740740-9741991 FORWARD LENGTH=194 51 2e-07
AT2G48140.1 | chr2:19686442-19687444 FORWARD LENGTH=201 51 3e-07
AT2G27130.1 | chr2:11595379-11596395 FORWARD LENGTH=177 51 4e-07
AT1G05450.2 | chr1:1600004-1601086 FORWARD LENGTH=206 50 8e-07
AT1G73560.1 | chr1:27649768-27650456 REVERSE LENGTH=148 49 1e-06
AT1G73890.1 | chr1:27787903-27788658 REVERSE LENGTH=194 48 3e-06
>AT3G22600.1 | chr3:8006711-8007397 REVERSE LENGTH=171
Length = 170
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 64/85 (75%)
Query: 30 SSTSGCTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVALNADTAALGLS 89
S+ S CT L+SMSPCLNY+TGN T+P+ CC +L VV+S P+CLC LN + LG++
Sbjct: 23 SAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGIN 82
Query: 90 INRTRALGLPDACKVQTPPVSNCKS 114
+N+T+ALGLP AC VQTPPVS C +
Sbjct: 83 VNQTQALGLPRACNVQTPPVSRCNT 107
>AT2G48130.1 | chr2:19685263-19685977 REVERSE LENGTH=184
Length = 183
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 62/83 (74%)
Query: 32 TSGCTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVALNADTAALGLSIN 91
+S C TL ++SPCL+Y+TGN T PS CC +L V+KS P+C+C A+N+ +GL+IN
Sbjct: 27 SSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGLNIN 86
Query: 92 RTRALGLPDACKVQTPPVSNCKS 114
RT+AL LP+AC +QTPP++ C +
Sbjct: 87 RTQALQLPNACNIQTPPLTQCNA 109
>AT4G14815.1 | chr4:8505122-8505760 FORWARD LENGTH=157
Length = 156
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 30 SSTSGCTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVALNADTAALGLS 89
S+ S CT L+SM+PCL+++T N + PS CC +L VV+ ECLC L+ + LG++
Sbjct: 21 SAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGIN 80
Query: 90 INRTRALGLPDACKVQTPPVSNCKS 114
+N T+AL LP AC V+TPP S C S
Sbjct: 81 VNETQALALPKACHVETPPASRCHS 105
>AT1G03103.1 | chr1:747219-747955 FORWARD LENGTH=172
Length = 171
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 33 SGCTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVALNADTAAL-GLSIN 91
+GC TL S+SPCL YL G ++PS SCC + VV+S PECLC +N++ ++ G N
Sbjct: 23 AGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYGFKFN 82
Query: 92 RTRALGLPDACKVQTPPVSNCKS 114
RT AL LP AC VQTP S C +
Sbjct: 83 RTLALNLPTACNVQTPSPSLCNT 105
>AT1G55260.1 | chr1:20614663-20616158 FORWARD LENGTH=228
Length = 227
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 35 CTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVAL-NADTAALGLSINRT 93
CT L+ +S C+ Y+ G+ AP+ CC G+V++ +C+C+ + + D LG+ IN T
Sbjct: 76 CTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCILVRDKDDPQLGIKINAT 135
Query: 94 RALGLPDACKVQTPPVSNCKS 114
A LP AC + P +++C S
Sbjct: 136 LAAHLPSACHITAPNITDCIS 156
>AT3G43720.1 | chr3:15615549-15617099 REVERSE LENGTH=194
Length = 193
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 29 PSSTSGCTQTLLSMSPCLNYLT----GNETAPSASCCGKLGEVVKSQPECLCVALNADTA 84
PS C L++M+ CL+Y+T G P +CC L +V+S P+CLC L+ D A
Sbjct: 32 PSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMA 91
Query: 85 A-LGLSINRTRALGLPDACKVQTPPVSNC 112
A LG+ I++ +AL LP C V TP S C
Sbjct: 92 AQLGIKIDKAKALKLPGVCGVITPDPSLC 120
>AT2G13820.1 | chr2:5774295-5776279 REVERSE LENGTH=170
Length = 169
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 35 CTQTLLSMSPCLNYLTGNETA--PSASCCGKLGEVVKSQPECLCVALNADTAALGLSINR 92
C+ +L+M+ CL+++T T P +CC L VV++ PECLC A ++ +LGL+++
Sbjct: 27 CSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFK-NSGSLGLTLDL 85
Query: 93 TRALGLPDACKVQTPPVSNC 112
++A LP CKV PP + C
Sbjct: 86 SKAASLPSVCKVAAPPSARC 105
>AT5G09370.1 | chr5:2909450-2910475 REVERSE LENGTH=159
Length = 158
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 33 SGCTQTLLSMSPCLNYLT--GNETAPSASCCGKLGEVVKSQPECLCVALNADTAALGLSI 90
S C ++++ PCL +++ G P+ASCC L ++ ++P CLC L A LG+ +
Sbjct: 26 SDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCEGLK--KAPLGIKL 83
Query: 91 NRTRALGLPDACKVQTPPVSNCKS 114
N T++ LP ACK+ PPVS C S
Sbjct: 84 NVTKSATLPVACKLNAPPVSACDS 107
>AT4G08670.1 | chr4:5536765-5538210 REVERSE LENGTH=209
Length = 208
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 31 STSGCTQTLLSMSPCLNYLT--GNETAPSASCCGKLGEVVKSQPECLCVALNADTAALGL 88
S+S C+ + SM CL YL NET P SCC + V++ P+C+C L +G+
Sbjct: 44 SSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGL-VSAGEMGI 102
Query: 89 SINRTRALGLPDACKVQTPP 108
+N TRAL P ACK+ P
Sbjct: 103 ELNSTRALATPKACKLSIAP 122
>AT5G64080.1 | chr5:25645475-25646638 REVERSE LENGTH=183
Length = 182
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 29 PSSTSGCTQTLLSMSPCLNYLT--GNETAPSASCCGKLGEVVKSQPECLCVALNADTAAL 86
P+ + C+ +L+M+ CL++++ G P +CC L V+K+ +CLC A + +A+L
Sbjct: 37 PAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKS-SASL 95
Query: 87 GLSINRTRALGLPDACKVQTPPVSNC 112
G+++N T+A LP ACK+ P ++ C
Sbjct: 96 GVTLNITKASTLPAACKLHAPSIATC 121
>AT2G44300.1 | chr2:18307468-18308286 REVERSE LENGTH=205
Length = 204
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 35 CTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVAL-NADTAALGLSINRT 93
CT+ L+ M+ CL Y+ G +P+ CC L +V+ S +CLCV + + + LGL IN +
Sbjct: 35 CTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDLGLQINVS 94
Query: 94 RALGLPDACK 103
AL LP C
Sbjct: 95 LALALPSVCH 104
>AT1G36150.1 | chr1:13528257-13529470 FORWARD LENGTH=257
Length = 256
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 29 PSSTSGCTQTLLSMSPCLNYLTGNETAPS--ASCCGKLGEVVKSQPECLCVALNADTAAL 86
PS+++ C+ + SM CL++LT T PS +CC + V+ P+CLC AL + + +
Sbjct: 39 PSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALES-SREM 97
Query: 87 GLSINRTRALGLPDACKVQTPPVSNCK 113
G ++ T+AL +P C V P NC
Sbjct: 98 GFVLDDTKALAMPKICNVPIDP--NCD 122
>AT2G44290.1 | chr2:18305418-18306202 REVERSE LENGTH=206
Length = 205
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 35 CTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVALNA-DTAALGLSINRT 93
CT L+ M+ CL Y+ G +P+ CC L +V+ S +CLC+ + + LGL +N +
Sbjct: 36 CTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDLGLQVNVS 95
Query: 94 RALGLPDACKVQTPPVSNC 112
AL LP C T ++ C
Sbjct: 96 LALALPSVCHA-TADITKC 113
>AT1G27950.1 | chr1:9740740-9741991 FORWARD LENGTH=194
Length = 193
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 35 CTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVALN----ADTAALGLSI 90
C Q ++ CL++ TG T PS CC + ++ + P+CLC + A L +
Sbjct: 35 CNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGV 94
Query: 91 NRTRALGLPDACKVQTPPVSNC 112
+ + LP +C++ ++NC
Sbjct: 95 QEDKLIQLPTSCQLHNASITNC 116
>AT2G48140.1 | chr2:19686442-19687444 FORWARD LENGTH=201
Length = 200
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 35 CTQTLLS-MSPCLNYLTGNE---TAPSASCCGKLGEVVKSQPECLCVALNADTAALGLSI 90
CT +++S +PCLN++TG+ P+A CC L + + C C+ L A+ I
Sbjct: 27 CTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPLPTGFI 86
Query: 91 NRTRALGLPDACKVQTPPV 109
NRT AL LP ACK+ P+
Sbjct: 87 NRTLALALPRACKMGGVPI 105
>AT2G27130.1 | chr2:11595379-11596395 FORWARD LENGTH=177
Length = 176
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 29 PSSTSGCTQTLLSMSPCLNYLT--GNETAPSASCCGKLGEVVKSQPECLCVALNADTA-A 85
PSS C ++L++S C +Y+ NE P A+CC +L +V+S PEC+C +
Sbjct: 34 PSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPR 93
Query: 86 LGLSINRTRALGLPDACKVQTPPVSNC 112
G+ +++ RA L C V+ P S C
Sbjct: 94 FGVKLDKQRAEQLSTICGVKAPSPSLC 120
>AT1G05450.2 | chr1:1600004-1601086 FORWARD LENGTH=206
Length = 205
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 35 CTQTLLS-MSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVALNADTAALGLSINRT 93
C+ ++LS ++ C ++LTG + P++ CCG L + + +CLC+ + A + + INRT
Sbjct: 33 CSPSMLSSVTGCTSFLTGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAG-VPISIPINRT 91
Query: 94 RALGLPDACKVQTPPVSNCKS 114
A+ LP AC + PV CK+
Sbjct: 92 LAISLPRACGIPGVPV-QCKA 111
>AT1G73560.1 | chr1:27649768-27650456 REVERSE LENGTH=148
Length = 147
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 33 SGCTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVALNADTAALGLSINR 92
+ C Q LL PC Y+ P SCCG + E+V+ CLC+A N L++ +
Sbjct: 31 TACLQKLL---PCQPYIHSLNPPPPPSCCGPMKEIVEKDAPCLCIAFNNPEVLKALNLTK 87
Query: 93 TRALGLPDACKVQTPPVSNC 112
AL LP AC V P VS C
Sbjct: 88 ENALLLPKACGVN-PDVSLC 106
>AT1G73890.1 | chr1:27787903-27788658 REVERSE LENGTH=194
Length = 193
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 35 CTQTLLSMSPCLNYLTGNETAPSASCCGKLGEVVKSQPECLCVAL-NADTAALGLSINRT 93
C LLS++PC ++ G P+ CC L ++ + CLC+ L N T + IN+T
Sbjct: 30 CASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPINQT 89
Query: 94 RALGLPDACKV 104
AL LP C +
Sbjct: 90 LALQLPPLCNI 100
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.128 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,539,175
Number of extensions: 80014
Number of successful extensions: 202
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 194
Number of HSP's successfully gapped: 24
Length of query: 170
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 79
Effective length of database: 8,611,713
Effective search space: 680325327
Effective search space used: 680325327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 108 (46.2 bits)