BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0489100 Os05g0489100|AK103739
(319 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-... 587 e-168
Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain con... 338 4e-93
Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain con... 335 3e-92
Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 325 4e-89
Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain con... 294 7e-80
Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit... 243 1e-64
Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain con... 211 7e-55
Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain con... 202 2e-52
Os03g0166100 202 4e-52
Os03g0761900 Similar to Prolyl 4-hydroxylase 166 2e-41
Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 140 1e-33
>Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-like protein
Length = 319
Score = 587 bits (1512), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/319 (89%), Positives = 286/319 (89%)
Query: 1 MAPVRLGAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVYPAPVVYPHHSRQ 60
MAPVRLGAPTS SSVYPAPVVYPHHSRQ
Sbjct: 1 MAPVRLGAPTSGALLLLVLLLICGGGGGGGVAAGGGGGGGGGKGSSVYPAPVVYPHHSRQ 60
Query: 61 ISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDARTSSGTFIRKSQ 120
ISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDARTSSGTFIRKSQ
Sbjct: 61 ISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDARTSSGTFIRKSQ 120
Query: 121 DPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTLRGGHRIATVL 180
DPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTLRGGHRIATVL
Sbjct: 121 DPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTLRGGHRIATVL 180
Query: 181 MYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDALLFFNLSPDAS 240
MYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDALLFFNLSPDAS
Sbjct: 181 MYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDALLFFNLSPDAS 240
Query: 241 KDSLSLHAGCPVIKGEKWSATKWIRVASFDKVYHTQGNCTDDNESCEKWAALGECIKNPE 300
KDSLSLHAGCPVIKGEKWSATKWIRVASFDKVYHTQGNCTDDNESCEKWAALGECIKNPE
Sbjct: 241 KDSLSLHAGCPVIKGEKWSATKWIRVASFDKVYHTQGNCTDDNESCEKWAALGECIKNPE 300
Query: 301 YMIGTAALPGYCRKSCNIC 319
YMIGTAALPGYCRKSCNIC
Sbjct: 301 YMIGTAALPGYCRKSCNIC 319
>Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 308
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/268 (60%), Positives = 198/268 (73%), Gaps = 6/268 (2%)
Query: 55 PHHSRQISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDARTSSGT 114
P Q+SW+PR FL++ FL+D E HL+SLA+ +L++S VADN SGKS +S+ RTSSG
Sbjct: 42 PSRVVQLSWRPRAFLHKGFLTDAECEHLISLAKDKLEKSMVADNESGKSVMSEVRTSSGM 101
Query: 115 FIRKSQDPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTLRGGH 174
F+ K QD +VA IEE+IAAWTFLP +NGE IQ+L Y++GEKYE HYDYF D N GGH
Sbjct: 102 FLEKKQDEVVARIEERIAAWTFLPPDNGESIQILHYQNGEKYEPHYDYFHDKNNQALGGH 161
Query: 175 RIATVLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDALLFFN 234
RIATVLMYL+DV +GGET+FP AE +D T S+CAK G AVKP KGDALLFF+
Sbjct: 162 RIATVLMYLSDVGKGGETIFPEAEGKL---LQPKDDTWSDCAKNGYAVKPVKGDALLFFS 218
Query: 235 LSPDASKDSLSLHAGCPVIKGEKWSATKWIRVASFD---KVYHTQGNCTDDNESCEKWAA 291
L PDA+ DS SLH CPVI+G+KWSATKWI V SFD K + C D+N C +WAA
Sbjct: 219 LHPDATTDSDSLHGSCPVIEGQKWSATKWIHVRSFDISVKQGASTDGCEDENVLCPQWAA 278
Query: 292 LGECIKNPEYMIGTAALPGYCRKSCNIC 319
+GEC KNP YM+GT PG+CRKSCN+C
Sbjct: 279 VGECAKNPNYMVGTNEAPGFCRKSCNVC 306
>Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 319
Score = 335 bits (858), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 159/276 (57%), Positives = 199/276 (72%), Gaps = 5/276 (1%)
Query: 46 SVYPAPVVYPHHSRQISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSEL 105
+V AP R +SW+PRVF+Y+ FLSDDE +HLV L + +++RS VADN SGKS +
Sbjct: 45 AVAAAPPFNASRVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVM 104
Query: 106 SDARTSSGTFIRKSQDPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSD 165
S+ RTSSG F+ K QDP+V+ IE++IAAWTFLP+EN E+IQ+LRY+HG+KYE H+DYF D
Sbjct: 105 SEVRTSSGMFLDKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHD 164
Query: 166 NVNTLRGGHRIATVLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPR 225
VN GGHR ATVLMYL+ V +GGETVFP AE + +D T SECA+KG+AVKP
Sbjct: 165 KVNQALGGHRYATVLMYLSTVEKGGETVFPNAEGWE---NQPKDDTFSECAQKGLAVKPV 221
Query: 226 KGDALLFFNLSPDASKDSLSLHAGCPVIKGEKWSATKWIRVASFDK--VYHTQGNCTDDN 283
KGD +LFF+L D D LSLH CPVI+GEKWSA KWIR+ S++ V C+D++
Sbjct: 222 KGDTVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYEHPPVSKVTEGCSDNS 281
Query: 284 ESCEKWAALGECIKNPEYMIGTAALPGYCRKSCNIC 319
C KWA GEC KNP YM+G LPG CRKSC +C
Sbjct: 282 ARCAKWAEAGECEKNPVYMVGAEGLPGNCRKSCGVC 317
>Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 299
Score = 325 bits (832), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 155/267 (58%), Positives = 197/267 (73%), Gaps = 5/267 (1%)
Query: 55 PHHSRQISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDARTSSGT 114
P Q+SW+PR FLY FLS DE +HLV+LA+ +++S VADN SGKS +S RTSSGT
Sbjct: 34 PARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSSGT 93
Query: 115 FIRKSQDPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTLRGGH 174
F+ K +D IV+GIE+++AAWTFLP+EN E IQ+L Y+ G+KY+ H+DYF D N RGGH
Sbjct: 94 FLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRGGH 153
Query: 175 RIATVLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDALLFFN 234
R+ATVLMYLTDV +GGETVFP A +D T S+CA+ G+AVKP+KGDALLFF+
Sbjct: 154 RVATVLMYLTDVKKGGETVFPNA---AGRHLQLKDETWSDCARSGLAVKPKKGDALLFFS 210
Query: 235 LSPDASKDSLSLHAGCPVIKGEKWSATKWIRVASFDKVYHTQGN--CTDDNESCEKWAAL 292
L +A+ D SLH CPVI+GEKWSATKWI V SFD + C+D+NE C +WAA+
Sbjct: 211 LHVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNPPDVSLDLPCSDENERCTRWAAV 270
Query: 293 GECIKNPEYMIGTAALPGYCRKSCNIC 319
GEC +NP+YM+GT G+CRKSC +C
Sbjct: 271 GECYRNPKYMVGTKDSLGFCRKSCGVC 297
>Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 241
Score = 294 bits (752), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 144/228 (63%), Positives = 169/228 (74%), Gaps = 6/228 (2%)
Query: 95 VADNLSGKSELSDARTSSGTFIRKSQDPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGE 154
VADN SGKS +S+ RTSSG F+ K QD +VA IEE+IAAWTFLP +NGE IQ+L Y++GE
Sbjct: 2 VADNESGKSVMSEVRTSSGMFLEKKQDEVVARIEERIAAWTFLPPDNGESIQILHYQNGE 61
Query: 155 KYERHYDYFSDNVNTLRGGHRIATVLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSE 214
KYE HYDYF D N GGHRIATVLMYL+DV +GGET+FP AE +D T S+
Sbjct: 62 KYEPHYDYFHDKNNQALGGHRIATVLMYLSDVGKGGETIFPEAEGKL---LQPKDDTWSD 118
Query: 215 CAKKGVAVKPRKGDALLFFNLSPDASKDSLSLHAGCPVIKGEKWSATKWIRVASFD---K 271
CAK G AVKP KGDALLFF+L PDA+ DS SLH CPVI+G+KWSATKWI V SFD K
Sbjct: 119 CAKNGYAVKPVKGDALLFFSLHPDATTDSDSLHGSCPVIEGQKWSATKWIHVRSFDISVK 178
Query: 272 VYHTQGNCTDDNESCEKWAALGECIKNPEYMIGTAALPGYCRKSCNIC 319
+ C D+N C +WAA+GEC KNP YM+GT PG+CRKSCN+C
Sbjct: 179 QGASTDGCEDENVLCPQWAAVGECAKNPNYMVGTNEAPGFCRKSCNVC 226
>Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit-like protein
Length = 321
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 155/209 (74%), Gaps = 2/209 (0%)
Query: 61 ISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDARTSSGTFIRKSQ 120
+SW+PR FLY +FLS +E +L+SLA+ +K+S V D +G S+ S RTSSG F+ + Q
Sbjct: 113 LSWEPRAFLYHNFLSKEECEYLISLAKPHMKKSTVVDASTGGSKDSRVRTSSGMFLGRGQ 172
Query: 121 DPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTLRGGHRIATVL 180
D I+ IE++I+ +TF+P ENGE +QVL Y+ G+KYE H+DYF D NT GG RIAT+L
Sbjct: 173 DKIIRTIEKRISDYTFIPVENGEGLQVLHYEVGQKYEPHFDYFHDEFNTKNGGQRIATLL 232
Query: 181 MYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDALLFFNLSPDAS 240
MYL+DV EGGET+FP ++ + S + LSECAKKG+AVKP+ GDALLF+++ PD S
Sbjct: 233 MYLSDVEEGGETIFPSSKANSSSSPFYNE--LSECAKKGLAVKPKMGDALLFWSMRPDGS 290
Query: 241 KDSLSLHAGCPVIKGEKWSATKWIRVASF 269
D+ SLH GCPVIKG KWS+TKW+RV +
Sbjct: 291 LDATSLHGGCPVIKGNKWSSTKWMRVHEY 319
>Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 303
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 161/272 (59%), Gaps = 26/272 (9%)
Query: 52 VVYPHHSRQISWKPRVFLYQHFLSDDEANHLVSLARTELKRS-AVADNLSGKSELSDART 110
V P S+++SW PR+FLY+ FLSD E +HLVS+ R ++ S A D R
Sbjct: 54 VFDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDG---------DRN 104
Query: 111 SSGTFIRKSQDPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTL 170
SS I +D +V+ IE++I+ W+FLPKENGE IQVL+Y + +
Sbjct: 105 SSYNNI---EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSS 156
Query: 171 RGGHRIATVLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDAL 230
G HR+AT+LMYL+DV +GGETVFP +E ++ S+C+ G AV+P KG+A+
Sbjct: 157 SGAHRLATILMYLSDVKQGGETVFPRSEM---KDAQAKEGAPSQCS--GYAVRPAKGNAI 211
Query: 231 LFFNLSPDASKDSLSLHAGCPVIKGEKWSATKWIRVASFD---KVYHTQGNCTDDNESCE 287
L FNL PD D S + CPV++GEKW A K I + FD ++ CTD+++ C
Sbjct: 212 LLFNLRPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDRCV 271
Query: 288 KWAALGECIKNPEYMIGTAALPGYCRKSCNIC 319
WAA GEC +NP +MIG++ G CRKSC +C
Sbjct: 272 SWAASGECDRNPVFMIGSSDYYGSCRKSCRVC 303
>Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 267
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 139/211 (65%), Gaps = 10/211 (4%)
Query: 61 ISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDARTSSGTFIRKSQ 120
ISW PR+ ++ +FLS +E ++L S+AR L+ S V D +GK S+ RTSSG F+ +
Sbjct: 64 ISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSGMFVSSEE 123
Query: 121 D--PIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTLRGGHRIAT 178
P++ IE++I+ ++ +P+ENGE IQVLRY+ + Y H+DYFSD N RGG R+AT
Sbjct: 124 RKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQRVAT 183
Query: 179 VLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDALLFFNLSPD 238
+LMYLTD EGGET FP A + + + KG+ VKP KGDA+LF+++ D
Sbjct: 184 MLMYLTDGVEGGETHFPQA--------GDGECSCGGKMVKGLCVKPNKGDAVLFWSMGLD 235
Query: 239 ASKDSLSLHAGCPVIKGEKWSATKWIRVASF 269
DS S+H GCPV++GEKWSATKW+R F
Sbjct: 236 GETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
>Os03g0166100
Length = 277
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 142/215 (66%), Gaps = 24/215 (11%)
Query: 61 ISWKPRVFLYQHFLSDDEANHLVSLART-ELKRSAVADNLSGKSELSDARTSSGTFIRKS 119
+SW+PR FLY+ FLSD E +HL+SLA+ ++++S V D SG+S S RTSSG F+ K
Sbjct: 45 VSWRPRAFLYEGFLSDAECDHLISLAKQGKMEKSTVVDGESGESVTSKVRTSSGMFLDKK 104
Query: 120 QDPIVAGIEEKIAAWTFLP-----------------KENGEDIQVLRYKHGEKYERHYDY 162
QD +VA IEE+IAAWT LP ENGE +Q+LRY GEKYE H+DY
Sbjct: 105 QDEVVARIEERIAAWTMLPTECIIFYCFANFAILKLSENGESMQILRYGQGEKYEPHFDY 164
Query: 163 FSDNVNTLRGGHRIATVLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAV 222
S + R G R+ATVLMYL++V + G+++ P A + +D T S+CA++G AV
Sbjct: 165 ISGRQGSTREGDRVATVLMYLSNV-KMGDSLLPQARL-----SQPKDETWSDCAEQGFAV 218
Query: 223 KPRKGDALLFFNLSPDASKDSLSLHAGCPVIKGEK 257
KP KG A+LFF+L P+A+ D+ SLH CPVI+GEK
Sbjct: 219 KPAKGSAVLFFSLHPNATLDTDSLHGSCPVIEGEK 253
>Os03g0761900 Similar to Prolyl 4-hydroxylase
Length = 310
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 131/222 (59%), Gaps = 15/222 (6%)
Query: 49 PAPVVYPHHSRQISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDA 108
P P + P+ +SW+PR + F + + ++V A+ L S +A G++E S
Sbjct: 93 PEPSLIPYQI--LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALR-KGETEESTK 149
Query: 109 --RTSSGTFIRKSQDPI--VAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFS 164
RTSSGTF+ +DP +A +E+KIA T +P+ +GE +LRY+ G++Y HYD F
Sbjct: 150 GIRTSSGTFLSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFD 209
Query: 165 DNVNTLRGGHRIATVLMYLTDVAEGGETVFPLAEEFTESGTNNE-DSTLSECAKKGVAVK 223
+ R+A+ L+YLTDV EGGET+FP E+G N + +C G+ VK
Sbjct: 210 PAQYGPQKSQRVASFLLYLTDVEEGGETMFPY-----ENGENMDIGYDYEKCI--GLKVK 262
Query: 224 PRKGDALLFFNLSPDASKDSLSLHAGCPVIKGEKWSATKWIR 265
PRKGD LLF++L + + D SLH CPVIKGEKW ATKWIR
Sbjct: 263 PRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIR 304
>Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 135
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 208 EDSTLSECAKKGVAVKPRKGDALLFFNLSPDASKDSLSLHAGCPVIKGEKWSATKWIRVA 267
+D T S+CA++G AVKP KG A+LFF+L P+A+ D SLH CPVI+GEKWSATKWI V
Sbjct: 21 KDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSATKWIHVR 80
Query: 268 SFDK-VYHTQGNCTDDNESCEKWAALGECIKNPEYMIGTAALPGYCRKSCNIC 319
S+D+ + C D + C WAA GEC KNP YM+GT+ PG+CRKSCN+C
Sbjct: 81 SYDENGRRSSDKCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCNVC 133
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,711,100
Number of extensions: 423789
Number of successful extensions: 970
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 947
Number of HSP's successfully gapped: 11
Length of query: 319
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 218
Effective length of database: 11,762,187
Effective search space: 2564156766
Effective search space used: 2564156766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)