BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0122800 Os05g0122800|AK065567
(119 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0122800 CD9/CD37/CD63 antigen family protein 210 2e-55
Os06g0653100 CD9/CD37/CD63 antigen family protein 101 1e-22
Os08g0260600 CD9/CD37/CD63 antigen family protein 100 4e-22
Os03g0853200 CD9/CD37/CD63 antigen family protein 96 4e-21
Os06g0572400 CD9/CD37/CD63 antigen family protein 94 2e-20
Os12g0249100 89 9e-19
Os02g0728800 89 1e-18
Os09g0425900 Similar to Senescence-associated protein 5 87 4e-18
Os08g0443800 CD9/CD37/CD63 antigen family protein 85 1e-17
Os02g0219700 CD9/CD37/CD63 antigen family protein 82 7e-17
AK073982 81 1e-16
Os03g0853000 78 1e-15
Os10g0503600 CD9/CD37/CD63 antigen family protein 67 2e-12
Os01g0977100 CD9/CD37/CD63 antigen family protein 66 7e-12
>Os05g0122800 CD9/CD37/CD63 antigen family protein
Length = 119
Score = 210 bits (534), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/119 (87%), Positives = 104/119 (87%)
Query: 1 HLQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVL 60
HLQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVL
Sbjct: 1 HLQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVL 60
Query: 61 AGIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNARRIENDEPFGMARMTKTQPSRFQF 119
AGIKKSWRK YVAGCAAFRNARRIENDEPFGMARMTKTQPSRFQF
Sbjct: 61 AGIKKSWRKVAILNIVVLIILVIVYVAGCAAFRNARRIENDEPFGMARMTKTQPSRFQF 119
>Os06g0653100 CD9/CD37/CD63 antigen family protein
Length = 117
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 1 HLQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVL 60
H+QSGCCKPPT C + YV+ET WT G + +D DC+ WSNDQ LC+ C SCKAGVL
Sbjct: 14 HIQSGCCKPPTGCNFAYVSETVWTKPSGFNST-DDPDCTTWSNDQTALCYDCQSCKAGVL 72
Query: 61 AGIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNARRIENDEP 103
A +K W+K Y GC AFRN RR +N P
Sbjct: 73 ANLKNDWKKIATVNIIFLIFLIIVYSVGCCAFRNNRR-DNSYP 114
>Os08g0260600 CD9/CD37/CD63 antigen family protein
Length = 273
Score = 99.8 bits (247), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
LQSGCCKPPT+C + Y NET+W P P+ +D DC+ WSNDQ LC+ C SCKAGVL
Sbjct: 171 LQSGCCKPPTACNFTYQNETYWI-KPPTPSNYSDPDCNSWSNDQSELCYGCQSCKAGVLG 229
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNARR 97
++ SW+K Y GC A RN RR
Sbjct: 230 NLRSSWKKIAFVNAAFVALLLVVYSLGCCALRNNRR 265
>Os03g0853200 CD9/CD37/CD63 antigen family protein
Length = 285
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
+QSGCCKPP+SC + YVN T WT P T N+VDCS+WSNDQQ LCFQCDSCKAG L
Sbjct: 192 IQSGCCKPPSSCGFTYVNGTTWTPTPAAAT--NNVDCSRWSNDQQKLCFQCDSCKAGFLD 249
Query: 62 GIKKSW 67
+K+W
Sbjct: 250 HTRKAW 255
>Os06g0572400 CD9/CD37/CD63 antigen family protein
Length = 272
Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
LQSGCCKPPT C Y YV+ T W NP P D DC+ W ND LC++C SCKAG+L
Sbjct: 169 LQSGCCKPPTVCGYAYVSPTVWV-NPANPAA--DADCAAWGNDPSQLCYECSSCKAGMLG 225
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNAR 96
+++ WR+ YV GC+AF+NA+
Sbjct: 226 TLREQWRRANVALVIATVALIFFYVIGCSAFKNAQ 260
>Os12g0249100
Length = 310
Score = 88.6 bits (218), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVN---DVDCSKWSNDQQTLCFQCDSCKAG 58
++SGCCKPPTSC + YVN T W P +VDCS+WSN+QQTLCFQCDSCKAG
Sbjct: 200 IESGCCKPPTSCGFRYVNGTTWIPTPAAAGTPAAATNVDCSRWSNNQQTLCFQCDSCKAG 259
Query: 59 VLAGIKKSW 67
L IKK+W
Sbjct: 260 FLDDIKKAW 268
>Os02g0728800
Length = 262
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
+QSGCCKPP C Y VNETFW A P DVDC +WSNDQ LCF+C++CKA L
Sbjct: 166 IQSGCCKPPVYCGYERVNETFWIA-PARGLDAADVDCLEWSNDQAVLCFRCNACKASALD 224
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNARR 97
++++WR Y C + R+ R
Sbjct: 225 TVRRNWRAVAVLNVAVLAILMLAYSLACCSVRDRSR 260
>Os09g0425900 Similar to Senescence-associated protein 5
Length = 276
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
L+SGCCKPP+SC + YV+ T WT VPT +D DC+ W +D LC+ C SCKAG +A
Sbjct: 168 LESGCCKPPSSCNFLYVSGTNWTK---VPTNSSDPDCNTWVDDGTQLCYNCQSCKAGAVA 224
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNARR 97
+K+ W++ Y GC AFRN RR
Sbjct: 225 TLKRDWKRVAVVCIVFLVFIVIVYSLGCCAFRNNRR 260
>Os08g0443800 CD9/CD37/CD63 antigen family protein
Length = 277
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
+QSGCCKPPTSC + Y T W + + D DC +WSND +C+ C SCKAGV+A
Sbjct: 168 VQSGCCKPPTSCNFTYGGGTRWGKTARLSSA--DPDCDEWSNDADEVCYGCRSCKAGVVA 225
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNARR 97
+K+ W++ Y GC AF+N+RR
Sbjct: 226 ALKRDWKRVAIVNVVFLAFIVVVYSVGCCAFKNSRR 261
>Os02g0219700 CD9/CD37/CD63 antigen family protein
Length = 270
Score = 82.4 bits (202), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
LQSGCCKPP C YNYV+ T W D DC W ND LC++C+SC+AG+LA
Sbjct: 168 LQSGCCKPPAVCGYNYVSPTVWAGP--AARPAADADCGAWGNDPSQLCYECESCRAGLLA 225
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNAR 96
++ W + Y+ GC+A++NA+
Sbjct: 226 ALRAQWHRANVALVVATVALVFLYLVGCSAYKNAQ 260
>AK073982
Length = 274
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
LQSGCCKPPT C Y +V W + + D DC WSND LC+ C SCKAG+L
Sbjct: 170 LQSGCCKPPTRCGYTFVTPISWISPI---SAAADPDCGAWSNDPSQLCYSCSSCKAGLLH 226
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNAR 96
+ + WR+ Y C AFR A+
Sbjct: 227 NLSREWRRADLILLVATVALLAVYAFACYAFRTAK 261
>Os03g0853000
Length = 297
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPT-------VVN---DVDCSKWSNDQQTLCFQ 51
++SGCCKPP+SC YVN T W + V N D DCS+WSND QTLCFQ
Sbjct: 186 IESGCCKPPSSCGLTYVNGTTWISTAASAGAPAAVAQVTNNNKDDDCSRWSNDHQTLCFQ 245
Query: 52 CDSCKAGVLAGIKKSW 67
CDSCKAG L ++W
Sbjct: 246 CDSCKAGFLRHTSQAW 261
>Os10g0503600 CD9/CD37/CD63 antigen family protein
Length = 270
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
++SGCC+PP C Y VN +++ + V +VDC + N + LC+ CDSCKAGV
Sbjct: 166 MESGCCRPPAECGYPAVNASYF--DLSYHPVSTNVDCKLYKNARSVLCYDCDSCKAGVAQ 223
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRNARRIENDEP 103
+K WR Y C A RN ++ P
Sbjct: 224 YMKTEWRVVAIFNVILFVILSFVYFVACCARRNTGESDSKVP 265
>Os01g0977100 CD9/CD37/CD63 antigen family protein
Length = 298
Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 2 LQSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCKAGVLA 61
+QSGCCKPPT+C Y Y + P DC +WSN LC+ CDSCKAGVL
Sbjct: 176 VQSGCCKPPTACTY-YDDAQQQQQQP---------DCYRWSNAPGVLCYGCDSCKAGVLE 225
Query: 62 GIKKSWRKXXXXXXXXXXXXXXXYVAGCAAFRN 94
+++ W Y C AFRN
Sbjct: 226 QLRRHWHNVTILNVVLLLLLILFYSCACCAFRN 258
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.132 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,163,016
Number of extensions: 127974
Number of successful extensions: 252
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 239
Number of HSP's successfully gapped: 14
Length of query: 119
Length of database: 17,035,801
Length adjustment: 85
Effective length of query: 34
Effective length of database: 12,597,611
Effective search space: 428318774
Effective search space used: 428318774
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 149 (62.0 bits)