Os06g0572400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CD9/CD37/CD63 antigen family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0572400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : CD9/CD37/CD63 antigen family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.26 | 0.56 | 8.6 | 2.35 | 2.43 | -2.11 | -1.12 | 2.12 | 0.413 | 21.8 | 48.63 | 242 | 3.45 | 21.9 |
| 145.79 | 0.562 | 8.58 | 2.52 | 2.52 | -1.85 | -0.982 | -- | 0.46 | 21.4 | 40.4 | 231 | 3.73 | 21.6 |
| 146.5 | 0.564 | 8.6 | 2.41 | 2.45 | -2.07 | -- | 1.57 | 0.418 | 21.8 | 48.61 | 238 | 3.57 | 21.8 |
| 149.3 | 0.569 | 8.59 | 2.52 | 2.52 | -1.87 | -- | -- | 0.447 | 21.4 | 40.52 | 231 | 3.75 | 21.6 |
| 267.21 | 0.761 | 8.55 | 2.37 | -- | -3.61 | -- | 2.28 | 0.312 | -- | 57.47 | 747 | 3.07 | 24 |
| 231.1 | 0.713 | 8.58 | 2.6 | 2.46 | -- | -1.15 | -- | 0.464 | 21 | -- | -- | -- | -- |
| 235.6 | 0.719 | 8.58 | 2.64 | 2.46 | -- | -- | -- | 0.463 | 21.1 | -- | -- | -- | -- |
| 275.88 | 0.774 | 8.55 | 2.57 | -- | -3.43 | -- | -- | 0.297 | -- | 61.68 | 756 | 2.65 | 24 |
| 318.44 | 0.831 | 8.64 | -- | 2.55 | -1.73 | -- | -- | 0.246 | 21.5 | 39.28 | 206 | 4.1 | 21.7 |
| 585.96 | 1.13 | 8.52 | 2.65 | -- | -- | -- | -- | 0.45 | -- | -- | -- | -- | -- |
| 419.71 | 0.958 | 8.65 | -- | 2.46 | -- | -- | -- | 0.169 | 21.2 | -- | -- | -- | -- |
| 378.37 | 0.906 | 8.62 | -- | -- | -3.68 | -- | -- | 0.0182 | -- | 54.81 | 781 | 18.9 | 19.2 |
| 771.04 | 1.3 | 8.58 | -- | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.70 | humidity | 50 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 2 | 145.95 | humidity | 50 | 270 | > th | dose dependent | rect. | 4 | 20 |
| 6 | 147.20 | humidity | 50 | 90 | > th | dose dependent | rect. | 6 | 19 |
| 25 | 151.61 | humidity | 60 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 32 | 152.54 | radiation | 20 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 46 | 154.90 | humidity | 90 | 270 | < th | dose dependent | rect. | 9 | 9 |
| 47 | 154.90 | humidity | 50 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 49 | 154.95 | radiation | 20 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 87 | 157.71 | humidity | 50 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 88 | 157.79 | humidity | 90 | 270 | < th | dose dependent | sin | 23 | NA |
| 91 | 157.87 | humidity | 70 | 270 | > th | dose independent | rect. | 4 | 20 |
| 112 | 158.86 | humidity | 70 | 270 | > th | dose independent | rect. | 5 | 18 |
| 128 | 159.83 | humidity | 90 | 90 | < th | dose dependent | sin | 20 | NA |
| 133 | 160.10 | radiation | 20 | 270 | < th | dose independent | rect. | 4 | 20 |
| 140 | 160.33 | radiation | 40 | 270 | < th | dose independent | rect. | 4 | 9 |
| 158 | 161.04 | humidity | 90 | 270 | < th | dose dependent | rect. | 24 | 18 |
| 163 | 161.24 | humidity | 90 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 165 | 161.28 | humidity | 90 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 170 | 161.36 | humidity | 50 | 270 | > th | dose dependent | sin | 23 | NA |
| 200 | 162.18 | radiation | 40 | 1440 | > th | dose dependent | sin | 12 | NA |
| 205 | 162.33 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 19 |
| 232 | 162.87 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 260 | 163.52 | radiation | 40 | 1440 | > th | dose dependent | rect. | 14 | 21 |
| 264 | 163.58 | radiation | 40 | 270 | < th | dose independent | rect. | 4 | 20 |
| 266 | 163.62 | radiation | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 281 | 163.90 | radiation | 40 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 309 | 164.09 | humidity | 50 | 90 | > th | dose dependent | sin | 20 | NA |
| 333 | 164.69 | radiation | 40 | 1440 | > th | dose independent | sin | 11 | NA |
| 336 | 164.77 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 362 | 164.93 | radiation | 40 | 270 | < th | dose independent | rect. | 5 | 18 |
| 363 | 164.93 | radiation | 40 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 415 | 165.40 | radiation | 10 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 416 | 165.41 | radiation | 40 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 424 | 165.45 | radiation | 40 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 450 | 165.57 | humidity | 50 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 454 | 165.60 | humidity | 60 | 90 | > th | dose dependent | rect. | 9 | 16 |
| 507 | 166.05 | radiation | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 705 | 167.44 | radiation | 40 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 788 | 168.08 | radiation | 40 | 1440 | < th | dose independent | rect. | 19 | 16 |
| 798 | 168.13 | radiation | 40 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 825 | 168.19 | humidity | 80 | 270 | < th | dose dependent | no | NA | NA |
| 834 | 168.21 | humidity | 80 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 904 | 168.49 | radiation | 10 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 912 | 168.56 | radiation | 40 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 928 | 168.67 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 989 | 168.97 | radiation | 10 | 270 | < th | dose dependent | sin | 21 | NA |