BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0572400 Os06g0572400|AK070273
(272 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19580.1 | chr2:8472393-8475021 REVERSE LENGTH=271 236 1e-62
AT5G46700.1 | chr5:18951035-18952439 FORWARD LENGTH=270 174 6e-44
AT3G45600.1 | chr3:16733973-16735854 REVERSE LENGTH=286 153 1e-37
AT2G23810.1 | chr2:10135859-10137352 REVERSE LENGTH=274 139 2e-33
AT4G28050.1 | chr4:13942566-13943621 REVERSE LENGTH=264 125 2e-29
AT4G30430.1 | chr4:14879029-14880272 REVERSE LENGTH=273 125 2e-29
AT5G60220.1 | chr5:24248957-24250065 FORWARD LENGTH=328 122 2e-28
AT4G23410.1 | chr4:12224094-12225206 FORWARD LENGTH=282 114 4e-26
AT1G18520.1 | chr1:6375051-6376178 FORWARD LENGTH=272 108 3e-24
AT3G12090.1 | chr3:3852326-3853714 REVERSE LENGTH=283 105 2e-23
AT1G63260.1 | chr1:23467105-23468945 REVERSE LENGTH=285 92 4e-19
AT5G23030.1 | chr5:7726819-7727709 FORWARD LENGTH=265 76 2e-14
AT2G03840.1 | chr2:1173170-1174115 FORWARD LENGTH=279 76 2e-14
>AT2G19580.1 | chr2:8472393-8475021 REVERSE LENGTH=271
Length = 270
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 158/270 (58%), Gaps = 5/270 (1%)
Query: 1 MAVSNNITACVNFLALVCAVPVVATGVWFASKQGDDCARVARWPXXXXXXXXXXXXXXXX 60
MA++NN+TA +N LAL+C++P+ A+G+W ASK ++C + RWP
Sbjct: 1 MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60
Query: 61 XXXYWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYSTW 120
Y + VTRP G+Y R Y +YRL+G+S W
Sbjct: 61 IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120
Query: 121 LRDRVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQS-HLTPLQSGCCKPPTV 179
L++ V D + W +RACLA ++ C KL QE FIT +QF+ S +TPLQSGCCKPPT
Sbjct: 121 LKENVV-DSKNWGRLRACLADTNVCPKLNQE---FITADQFFSSSKITPLQSGCCKPPTA 176
Query: 180 CGYAYVSPTXXXXXXXXXXXXXXXXXGNDPSQLCYECSSCKAGMLGTLREQWRRANVALV 239
CGY +V+PT ND SQLCY C+SCKAG+LG LR++WR+AN+ L+
Sbjct: 177 CGYNFVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILI 236
Query: 240 IATVALIFFYVIGCSAFKNAQTEDLFRRYK 269
I V LI+ YVI CSAF+NAQTEDLFR+YK
Sbjct: 237 ITVVVLIWVYVIACSAFRNAQTEDLFRKYK 266
>AT5G46700.1 | chr5:18951035-18952439 FORWARD LENGTH=270
Length = 269
Score = 174 bits (440), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 136/269 (50%), Gaps = 4/269 (1%)
Query: 1 MAVSNNITACVNFLALVCAVPVVATGVWFASKQGDDCARVARWPXXXXXXXXXXXXXXXX 60
M +SNN+ C+NF+ ++ ++PV+ G+W A + C ++ +WP
Sbjct: 1 MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60
Query: 61 XXXYWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYSTW 120
+W VT +P +RAY +Y L +S W
Sbjct: 61 IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120
Query: 121 LRDRVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQSHLTPLQSGCCKPPTVC 180
LR RV +WE IR CL+ + C +L Q + + F+ +HL P+QSGCCKPPT C
Sbjct: 121 LRRRVQ-RSYKWERIRTCLSTTTICPELNQR---YTLAQDFFNAHLDPIQSGCCKPPTKC 176
Query: 181 GYAYVSPTXXXXXXXXXXXXXXXXXGNDPSQLCYECSSCKAGMLGTLREQWRRANVALVI 240
G+ +V+PT ND + LCY C SCKAG+L ++ W +A++ L++
Sbjct: 177 GFTFVNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLL 236
Query: 241 ATVALIFFYVIGCSAFKNAQTEDLFRRYK 269
A + LI Y+IGC AF+NA+TED+FR+YK
Sbjct: 237 ALIGLIIVYIIGCCAFRNAETEDIFRKYK 265
>AT3G45600.1 | chr3:16733973-16735854 REVERSE LENGTH=286
Length = 285
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 126/268 (47%), Gaps = 8/268 (2%)
Query: 1 MAVSNNITACVNFLALVCAVPVVATGVWFASK-QGDDCARVARWPXXXXXXXXXXXXXXX 59
M SN++ VNFL + ++P++ G+W +S+ DC R +WP
Sbjct: 1 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60
Query: 60 XXXXYWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYST 119
+ + VT R Y DY L+ YS
Sbjct: 61 FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120
Query: 120 WLRDRVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPE---QFYQSHLTPLQSGCCKP 176
WL+DRV+ D W I +CL S CRK+ + F PE F+ L+P++SGCCKP
Sbjct: 121 WLKDRVS-DDSYWGKISSCLRDSGACRKIGRN--FNGVPETADMFFLRRLSPVESGCCKP 177
Query: 177 PTVCGYAYVSPTXXXXXXXXXXXXXXXXX-GNDPSQLCYECSSCKAGMLGTLREQWRRAN 235
PT CG++YV+ T ND S LCY+CSSCKAG+LG+L++ WR+ +
Sbjct: 178 PTDCGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVS 237
Query: 236 VALVIATVALIFFYVIGCSAFKNAQTED 263
V ++ + L+ FYVI +A++N + D
Sbjct: 238 VINIVVLIILVIFYVIAYAAYRNVKRID 265
>AT2G23810.1 | chr2:10135859-10137352 REVERSE LENGTH=274
Length = 273
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 116/266 (43%), Gaps = 5/266 (1%)
Query: 4 SNNITACVNFLALVCAVPVVATGVWFASKQGDDCARVARWPXXXXXXXXXXXXXXXXXXX 63
SNN+ +NFL + ++P++A G+W + K +C R P
Sbjct: 5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64
Query: 64 YWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYSTWLRD 123
VT + Y +Y+L YSTWL+
Sbjct: 65 CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124
Query: 124 RVAGDPRRWEGIRACLAASDTCRKLAQESVFFITP-EQFYQSHLTPLQSGCCKPPTVCGY 182
RV + + W IR+CL S C KL E+ F P FY+ HLT LQSGCCKP CG+
Sbjct: 125 RVE-NGKNWNKIRSCLVESKVCSKL--EAKFVNVPVNSFYKEHLTALQSGCCKPSDECGF 181
Query: 183 AYVSPTXXXXXXXXXXXXXXXXX-GNDPSQLCYECSSCKAGMLGTLREQWRRANVALVIA 241
YV+PT N +LC++C SCKAG+L ++ W++ + ++
Sbjct: 182 EYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVF 241
Query: 242 TVALIFFYVIGCSAFKNAQTEDLFRR 267
V LI Y +GC AF+N + +D + R
Sbjct: 242 LVFLIIVYSVGCCAFRNNKRDDSYSR 267
>AT4G28050.1 | chr4:13942566-13943621 REVERSE LENGTH=264
Length = 263
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 102/255 (40%), Gaps = 2/255 (0%)
Query: 4 SNNITACVNFLALVCAVPVVATGVWFASKQGDDCARVARWPXXXXXXXXXXXXXXXXXXX 63
SNN+ +NF + ++P+++ G+W +C R P
Sbjct: 5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64
Query: 64 YWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYSTWLRD 123
VT R Y +Y + YS WL+
Sbjct: 65 CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124
Query: 124 RVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQSHLTPLQSGCCKPPTVCGYA 183
RV + + WE IR+CL SD C I E FY+S+L LQSGCCKP C +
Sbjct: 125 RV-NNAKNWERIRSCLMYSDVCSTYRTRYAS-INVEDFYKSNLNALQSGCCKPSNDCNFT 182
Query: 184 YVSPTXXXXXXXXXXXXXXXXXGNDPSQLCYECSSCKAGMLGTLREQWRRANVALVIATV 243
YV+PT N P LCY+C +CKAG+L ++ W++ ++ +
Sbjct: 183 YVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLI 242
Query: 244 ALIFFYVIGCSAFKN 258
LI Y +GC AF+N
Sbjct: 243 FLIIVYSVGCCAFRN 257
>AT4G30430.1 | chr4:14879029-14880272 REVERSE LENGTH=273
Length = 272
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 3/264 (1%)
Query: 4 SNNITACVNFLALVCAVPVVATGVWFASKQGDDCARVARWPXXXXXXXXXXXXXXXXXXX 63
SN++ +NF + +VP+++TG+W + K C R P
Sbjct: 5 SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGS 64
Query: 64 YWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYSTWLRD 123
VT +AY +YRL+ YS WL+
Sbjct: 65 CCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQR 124
Query: 124 RVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQSHLTPLQSGCCKPPTVCGYA 183
RV + + W IR+CL S C L + T FY+ LT +SGCCKP C +
Sbjct: 125 RV-NNAKHWNSIRSCLYESKFCYNLELVTANH-TVSDFYKEDLTAFESGCCKPSNDCDFT 182
Query: 184 YVSPTXXXXXXXXXXXXXXXXXGNDPSQLCYECSSCKAGMLGTLREQWRRANVALVIATV 243
Y++ T N+ +LCY C +CKAG L L+ W+R + +I V
Sbjct: 183 YITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLV 242
Query: 244 ALIFFYVIGCSAFKNAQTEDLFRR 267
L+ Y +GC AF+N + ED + R
Sbjct: 243 LLVVVYAMGCCAFRNNK-EDRYGR 265
>AT5G60220.1 | chr5:24248957-24250065 FORWARD LENGTH=328
Length = 327
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 1 MAVSNNITACVNFLALVCAVPVVATGVWFASK-QGDDCARVARWPXXXXXXXXXXXXXXX 59
M +N+ +NF + ++P++ G+W +S+ DC R +WP
Sbjct: 1 MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60
Query: 60 XXXXYWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYST 119
+ + VT R Y DY L+ YS
Sbjct: 61 IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120
Query: 120 WLRDRVAGDPRRWEGIRACLAASDTCRKLAQE-SVFFITPEQFYQSHLTPLQSGCCKPPT 178
WL+DRV D W I +C+ S C+K+ ++ + T FY +L+P++SGCCKPPT
Sbjct: 121 WLKDRVT-DNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPT 179
Query: 179 VCGYAYVSPTXXXXXXXXXXXXXXXXX-GNDPSQLCYECSSCKAGMLGTLREQWRRANVA 237
CGY YV+ T ND LCY+CSSCKAG+LG+L++ WR+ +V
Sbjct: 180 DCGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVI 239
Query: 238 LVIATVALIFFYVIGCSAFKNAQ 260
++ + L+ FYVI C+A++N +
Sbjct: 240 NIVVVIILVIFYVIACAAYQNVK 262
>AT4G23410.1 | chr4:12224094-12225206 FORWARD LENGTH=282
Length = 281
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 95 VTRPSGAYPAFARAYDDYRLDGYSTWLRDRVAGDPRRWEGIRACLAASDTCRKLAQESVF 154
VT SG R Y +++L+ Y WL+ RV D W I+ CL S TC KLA
Sbjct: 95 VTSHSGGVVVDGRVYKEFKLEAYHPWLKTRVV-DTNYWVTIKTCLLGSVTCSKLA----- 148
Query: 155 FITPEQFYQSHLTPLQSGCCKPPTVCGYAYVSPTXXXXXXXXXXXXXXXXXGNDPSQLCY 214
TP + Q L+PLQSGCCKPPT C Y N + LCY
Sbjct: 149 LWTPLDYLQKDLSPLQSGCCKPPTSCVY--------NTDTVIQQDPDCYRWNNAATVLCY 200
Query: 215 ECSSCKAGMLGTLREQWRRANVALVIATVALIFFYVIGCSAFKNAQ 260
+C +C+AG+L T+R W + ++ VI + LI Y +GC AFKNA+
Sbjct: 201 DCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCCAFKNAK 246
>AT1G18520.1 | chr1:6375051-6376178 FORWARD LENGTH=272
Length = 271
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 105/264 (39%), Gaps = 8/264 (3%)
Query: 3 VSNNITACVNFLALVCAVPVVATGVWFASKQG-DDCARVARWPXXXXXXXXXXXXXXXXX 61
VSN + N L ++ + ++ QG DC R P
Sbjct: 4 VSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVI 63
Query: 62 XXYWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYSTWL 121
+ VT R Y +YR +STWL
Sbjct: 64 GSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWL 123
Query: 122 RDRVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQSHLTPLQSGCCKPPTVCG 181
V G +RW GIR+CLA ++ C L+ V I + FY +L+P+QSGCCKPP+ C
Sbjct: 124 NGFVGG--KRWVGIRSCLAEANVCDDLSDGRVSQI-ADAFYHKNLSPIQSGCCKPPSDCN 180
Query: 182 YAYVSPTX----XXXXXXXXXXXXXXXXGNDPSQLCYECSSCKAGMLGTLREQWRRANVA 237
+ + + T N ++LC+ C++CKAG+L +RE+WR V
Sbjct: 181 FEFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLVF 240
Query: 238 LVIATVALIFFYVIGCSAFKNAQT 261
+ + LI Y GC A +N +T
Sbjct: 241 NICLLILLITVYSCGCCARRNNRT 264
>AT3G12090.1 | chr3:3852326-3853714 REVERSE LENGTH=283
Length = 282
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 103/257 (40%), Gaps = 16/257 (6%)
Query: 4 SNNITACVNFLALVCAVPVVATGVWFASKQGDDCARVARWPXXXXXXXXXXXXXXXXXXX 63
SN + +N L L+ ++P++ T + + ++ C + P
Sbjct: 5 SNTVIGVLNLLTLLASIPIIGTAL-YKARSSTTCENFLQTPLLVIGFIILIVSLAGFIGA 63
Query: 64 YWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYSTWLRD 123
+N VT G R Y +YRL Y WLR+
Sbjct: 64 CFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRE 123
Query: 124 RVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQSHLTPLQSGCCKPPTVCGYA 183
RV DP W IR+C+ +S TC K+ + ++Q +T +QSGCCKPPT C Y
Sbjct: 124 RVR-DPEYWNSIRSCILSSKTCTKIESWTTL-----DYFQRDMTSVQSGCCKPPTACTYE 177
Query: 184 YVSPTXXXXXXXXXXXXXXXXXGNDPSQLCYECSSCKAGMLGTLREQWRRANVALVIATV 243
N LCYEC +CKAG+L +R WR+ +V ++ V
Sbjct: 178 ---------AGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLV 228
Query: 244 ALIFFYVIGCSAFKNAQ 260
LI Y GC AF N +
Sbjct: 229 LLIAVYAAGCCAFHNTR 245
>AT1G63260.1 | chr1:23467105-23468945 REVERSE LENGTH=285
Length = 284
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 98/247 (39%), Gaps = 6/247 (2%)
Query: 1 MAVSNNITACVNFLALVCAVPVVATGVWFASKQGDDCARVARWPXXXXXXXXXXXXXXXX 60
M S + VN L ++ AV V+ GVW S D C R +P
Sbjct: 3 MGTSTFVIRWVNLLTMLLAVAVIIFGVWM-STHNDGCRRSLTFPVIALGGFIFLISIIGF 61
Query: 61 XXXYWNRRGXXXXXXXXXXXXXXXXXXXXXXXXXVTRPSGAYPAFARAYDDYRLDGYSTW 120
VT + Y +Y+L+ YS+W
Sbjct: 62 LGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSW 121
Query: 121 LRDRVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQSHLTPLQSGCCKPPTVC 180
++ + W +++CL S+ CRKL+++ + T +Q + LTP+++GCC+PP+ C
Sbjct: 122 FLKQL-NNTSNWIRLKSCLVKSEQCRKLSKK---YKTIKQLKSAELTPIEAGCCRPPSEC 177
Query: 181 GYAYVSPTXXXXXXXXXXXXXX-XXXGNDPSQLCYECSSCKAGMLGTLREQWRRANVALV 239
GY V+ + N + CY C SCKAG+ ++ +WR + V
Sbjct: 178 GYPAVNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNV 237
Query: 240 IATVALI 246
+ V LI
Sbjct: 238 VLFVVLI 244
>AT5G23030.1 | chr5:7726819-7727709 FORWARD LENGTH=265
Length = 264
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 95 VTRPSGAYPAFARAYDDYRLDGYSTWLRDRVAGDPRRWEGIRACLAASDTCRKLAQESVF 154
VT P+ R + + Y W+ + + WEGI CL+ S C++ +
Sbjct: 96 VTNPTAGKALSGRGIGNVKTGDYQNWIGNHFL-RGKNWEGITKCLSDSRVCKRFGPRDI- 153
Query: 155 FITPEQFYQSHLTPLQSGCCKPPTVCGYAYVSPT--XXXXXXXXXXXXXXXXXGNDPSQL 212
F HL+ +Q GCC+PP CG+ + T N QL
Sbjct: 154 -----DFDSKHLSNVQFGCCRPPVECGFESKNATWWTVPATATTAIIGDCKAWSNTQRQL 208
Query: 213 CYECSSCKAGMLGTLREQWRRANVALVIATVALIFFYVIGCSAFKN 258
CY C SCK G+L +R++WR V ++ + ++F Y GC KN
Sbjct: 209 CYACESCKIGVLKGIRKRWRILIVVNLLLILLVVFLYSCGCCVRKN 254
>AT2G03840.1 | chr2:1173170-1174115 FORWARD LENGTH=279
Length = 278
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 111 DYRLDGYSTWLRDRVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQSHLTPLQ 170
++R + YS W+ V D W R CL + C +L + + +FYQ +LTP+Q
Sbjct: 129 EFRYEDYSGWVSRLVIKDDE-WYRTRRCLVKDNVCNRLNHK----MPASEFYQMNLTPIQ 183
Query: 171 SGCCKPPTVCGYAYVSPTXXXXXXXXXXXXXXXXXGNDPSQ-LCYECSSCKAGMLGTLRE 229
SGCCKPP CG Y P N+ + LC++C SCKA ++ +
Sbjct: 184 SGCCKPPLSCGLNYEKPNNWTVSRYYNNLEVDCKRWNNSADTLCFDCDSCKAVIIADVHN 243
Query: 230 QWRRANVALVIATVALIFFYVIGCSA 255
+ ++ + + +IF IG +
Sbjct: 244 ----TSFSITVNIIHIIFSLCIGMTG 265
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.136 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,829,708
Number of extensions: 151670
Number of successful extensions: 394
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 356
Number of HSP's successfully gapped: 14
Length of query: 272
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 175
Effective length of database: 8,447,217
Effective search space: 1478262975
Effective search space used: 1478262975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 111 (47.4 bits)