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Os08g0260600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CD9/CD37/CD63 antigen family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.96 (0.0616) R2 : 0.683
β1 : 1.55 (0.224) R2dD : 0.037 R2D : -0.0243
β2 : 3.39 (0.147) R2dC : 0.369 R2C : 0.4
β3 : 2.59 (0.194) R2dE : 0.146 R2E : 0.117
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.91 (0.134) R2dN8 : 0.195 R2N8 : 0.0609
σ : 1.14
deviance : 600.69
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C
peak time of C : 23.4
E
wheather : radiation
threshold : 19.38
memory length : 1319
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 11.5
open length of G : 1.18

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
591.98 1.14 7.94 1.64 3.55 2.38 0.232 -2.72 2.03 23.4 19.92 1423 11.4 0.884
613.47 1.15 7.94 1.6 3.54 2.45 0.0696 -- 2.01 23.4 19.98 1421 11.4 0.9
590.35 1.13 7.96 1.67 3.46 2.45 -- -2.82 1.93 23.4 19.77 1379 11.4 1.13
600.69 1.14 7.96 1.55 3.39 2.59 -- -- 1.91 23.4 19.38 1319 11.5 1.18
981.11 1.46 7.92 1.73 -- 2.76 -- -2.74 1.9 -- 40.66 1157 12.1 0.865
857.17 1.37 8.07 1.34 3.66 -- -0.00912 -- 1.46 23.4 -- -- -- --
857.17 1.37 8.07 1.34 3.66 -- -- -- 1.46 23.4 -- -- -- --
902.89 1.4 7.97 1.79 -- 3.18 -- -- 1.24 -- 52.1 1090 12.3 1.4
659.68 1.2 7.95 -- 3.28 2.64 -- -- 1.85 23.4 19.56 1300 11.4 1.87
1696.27 1.92 7.99 1.44 -- -- -- -- 1.5 -- -- -- -- --
904.82 1.41 8.11 -- 3.67 -- -- -- 1.31 23.4 -- -- -- --
804.5 1.32 8.04 -- -- 4.15 -- -- 1.11 -- 49.59 1081 12.2 3.12
1750.98 1.95 8.02 -- -- -- -- -- 1.34 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 620.43 radiation 20 1440 < th dose independent rect. 11 1
2 620.89 humidity 70 1440 < th dose independent rect. 11 2
3 627.70 humidity 70 1440 > th dose independent rect. 11 2
4 630.22 radiation 20 1440 < th dose dependent rect. 11 1
9 639.94 radiation 10 1440 < th dose dependent rect. 6 11
12 641.46 radiation 10 1440 < th dose dependent sin 0 NA
21 643.58 radiation 10 1440 < th dose dependent rect. 6 21
26 643.81 humidity 70 1440 < th dose independent rect. 19 19
27 643.91 humidity 70 1440 < th dose independent rect. 17 21
32 644.66 radiation 10 1440 < th dose dependent rect. 2 15
42 645.27 radiation 10 1440 < th dose dependent rect. 11 22
46 645.50 humidity 70 1440 < th dose independent rect. 6 8
73 646.42 humidity 70 1440 > th dose independent rect. 19 19
136 647.98 radiation 10 1440 < th dose dependent no NA NA
180 650.03 humidity 70 1440 > th dose independent rect. 2 12
195 650.12 humidity 70 1440 > th dose independent rect. 4 10
203 650.28 humidity 70 1440 > th dose independent rect. 6 8
261 651.31 temperature 20 720 > th dose independent rect. 18 14
313 651.91 humidity 70 1440 < th dose independent sin 2 NA
399 655.58 radiation 10 1440 < th dose independent rect. 13 4
433 657.06 humidity 70 1440 < th dose independent rect. 10 23
434 657.09 radiation 20 1440 < th dose independent rect. 11 22
436 657.14 wind 9 4320 > th dose independent rect. 17 4
437 657.15 wind 9 4320 < th dose independent rect. 17 4
439 657.19 humidity 70 1440 < th dose independent rect. 6 12
507 658.22 humidity 70 1440 < th dose independent no NA NA
590 658.74 humidity 70 1440 < th dose independent rect. 9 9
595 659.01 radiation 20 1440 > th dose independent rect. 11 1
600 659.09 temperature 20 720 > th dose independent sin 12 NA
603 659.16 humidity 70 1440 > th dose independent sin 2 NA
612 659.35 radiation 10 1440 < th dose independent sin 19 NA
613 659.45 humidity 80 1440 < th dose dependent rect. 20 18
622 659.78 humidity 90 1440 < th dose dependent rect. 2 13
840 662.12 radiation 10 1440 < th dose independent rect. 13 14
856 662.26 humidity 80 1440 < th dose dependent sin 7 NA
867 662.36 radiation 20 1440 < th dose independent rect. 11 18
881 662.50 radiation 20 1440 < th dose independent rect. 11 16
936 663.12 radiation 10 1440 < th dose independent rect. 9 18
996 664.16 radiation 20 1440 < th dose independent rect. 15 23