BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0260600 Os08g0260600|AK108529
(273 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G28050.1 | chr4:13942566-13943621 REVERSE LENGTH=264 223 1e-58
AT2G23810.1 | chr2:10135859-10137352 REVERSE LENGTH=274 218 4e-57
AT4G30430.1 | chr4:14879029-14880272 REVERSE LENGTH=273 202 2e-52
AT1G18520.1 | chr1:6375051-6376178 FORWARD LENGTH=272 196 2e-50
AT3G45600.1 | chr3:16733973-16735854 REVERSE LENGTH=286 187 4e-48
AT5G60220.1 | chr5:24248957-24250065 FORWARD LENGTH=328 171 5e-43
AT5G46700.1 | chr5:18951035-18952439 FORWARD LENGTH=270 166 8e-42
AT2G19580.1 | chr2:8472393-8475021 REVERSE LENGTH=271 159 2e-39
AT3G12090.1 | chr3:3852326-3853714 REVERSE LENGTH=283 155 2e-38
AT4G23410.1 | chr4:12224094-12225206 FORWARD LENGTH=282 148 3e-36
AT1G63260.1 | chr1:23467105-23468945 REVERSE LENGTH=285 139 2e-33
AT5G23030.1 | chr5:7726819-7727709 FORWARD LENGTH=265 136 1e-32
AT2G03840.1 | chr2:1173170-1174115 FORWARD LENGTH=279 115 2e-26
AT5G57810.1 | chr5:23424466-23425589 REVERSE LENGTH=318 78 4e-15
>AT4G28050.1 | chr4:13942566-13943621 REVERSE LENGTH=264
Length = 263
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 149/268 (55%), Gaps = 10/268 (3%)
Query: 4 RCSNAVFAAINXXXXXXXXXXXXXXIYYGAPHRGGGGVTECERFLRAPALALGGAIVAVS 63
+CSN + +N I+ G TECERFL P + LG ++ VS
Sbjct: 3 QCSNNLLGILNFFTFLLSIPILSAGIWLGK-----NAATECERFLDKPMVVLGIFLMFVS 57
Query: 64 LAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFALVVTNAGAGRAVSGRGFREYHLGD 123
+AGL GACCR + CF +FA VTN GAG +S RG++EYH+ D
Sbjct: 58 IAGLVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVAD 117
Query: 124 YSTWLRRSVEDGGHWARIRSCLVDTGVC---RSLKSNQTLDEFVNSNLSPLQSGCCKPPT 180
YS WL++ V + +W RIRSCL+ + VC R+ ++ +++F SNL+ LQSGCCKP
Sbjct: 118 YSNWLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSN 177
Query: 181 ACNFTYQNETYWIKPPTPSNYSDPDCNSWSNDQSELCYGCQSCKAGVLGNLRSSWKKIXX 240
CNFTY N T W K P P Y + DCN W N LCY C++CKAG+L N+++SWKK+
Sbjct: 178 DCNFTYVNPTTWTKTPGP--YKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAK 235
Query: 241 XXXXXXXXXXXXYSLGCCALRNNRRHKY 268
YS+GCCA RNNR+ +
Sbjct: 236 VNIVFLIFLIIVYSVGCCAFRNNRKRSW 263
>AT2G23810.1 | chr2:10135859-10137352 REVERSE LENGTH=274
Length = 273
Score = 218 bits (554), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 151/265 (56%), Gaps = 9/265 (3%)
Query: 4 RCSNAVFAAINXXXXXXXXXXXXXXIYYGAPHRGGGGVTECERFLRAPALALGGAIVAVS 63
RCSN + +N I G G TECERFL P +ALG ++ V+
Sbjct: 3 RCSNNLVGILNFLVFLLSIP-----ILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVA 57
Query: 64 LAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFALVVTNAGAGRAVSGRGFREYHLGD 123
+AGL G+CCR T C VFA VVTN GAG A+ G+G++EY LGD
Sbjct: 58 IAGLIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGD 117
Query: 124 YSTWLRRSVEDGGHWARIRSCLVDTGVCRSLKS---NQTLDEFVNSNLSPLQSGCCKPPT 180
YSTWL++ VE+G +W +IRSCLV++ VC L++ N ++ F +L+ LQSGCCKP
Sbjct: 118 YSTWLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSD 177
Query: 181 ACNFTYQNETYWIKPPTPSNYSDPDCNSWSNDQSELCYGCQSCKAGVLGNLRSSWKKIXX 240
C F Y N T T +++PDC +W N + +LC+ CQSCKAG+L N++S+WKK+
Sbjct: 178 ECGFEYVNPTT-WTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAI 236
Query: 241 XXXXXXXXXXXXYSLGCCALRNNRR 265
YS+GCCA RNN+R
Sbjct: 237 VNIVFLVFLIIVYSVGCCAFRNNKR 261
>AT4G30430.1 | chr4:14879029-14880272 REVERSE LENGTH=273
Length = 272
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 134/232 (57%), Gaps = 5/232 (2%)
Query: 40 GVTECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFA 99
T+CERFL P +ALG ++ +++AG+ G+CCR T CF +FA
Sbjct: 34 ATTQCERFLDKPMIALGVFLMIIAIAGVVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFA 93
Query: 100 LVVTNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTGVCRSLK---S 156
VVT+ G+G + G+ ++EY L YS WL+R V + HW IRSCL ++ C +L+ +
Sbjct: 94 FVVTSKGSGETIQGKAYKEYRLEAYSDWLQRRVNNAKHWNSIRSCLYESKFCYNLELVTA 153
Query: 157 NQTLDEFVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSDPDCNSWSNDQSEL 216
N T+ +F +L+ +SGCCKP C+FTY T W K T + + DC W N++ +L
Sbjct: 154 NHTVSDFYKEDLTAFESGCCKPSNDCDFTYITSTTWNK--TSGTHKNSDCQLWDNEKHKL 211
Query: 217 CYGCQSCKAGVLGNLRSSWKKIXXXXXXXXXXXXXXYSLGCCALRNNRRHKY 268
CY C++CKAG L NL+++WK++ Y++GCCA RNN+ +Y
Sbjct: 212 CYNCKACKAGFLDNLKAAWKRVAIVNIIFLVLLVVVYAMGCCAFRNNKEDRY 263
>AT1G18520.1 | chr1:6375051-6376178 FORWARD LENGTH=272
Length = 271
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 132/236 (55%), Gaps = 8/236 (3%)
Query: 40 GVTECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFA 99
GVT+CE +R P L G + VSL G+ G+C + F +F
Sbjct: 35 GVTDCESAIRIPLLTTGLILFLVSLLGVIGSCFKENLAMVSYLIILFGGIVALMIFSIFL 94
Query: 100 LVVTNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTGVCRSL---KS 156
VTN GAGR VSGRG++EY D+STWL V G W IRSCL + VC L +
Sbjct: 95 FFVTNKGAGRVVSGRGYKEYRTVDFSTWLNGFV-GGKRWVGIRSCLAEANVCDDLSDGRV 153
Query: 157 NQTLDEFVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYS---DPDCNSWSNDQ 213
+Q D F + NLSP+QSGCCKPP+ CNF ++N T+WI PP+ + + + DC +WSN Q
Sbjct: 154 SQIADAFYHKNLSPIQSGCCKPPSDCNFEFRNATFWI-PPSKNETAVAENGDCGTWSNVQ 212
Query: 214 SELCYGCQSCKAGVLGNLRSSWKKIXXXXXXXXXXXXXXYSLGCCALRNNRRHKYS 269
+ELC+ C +CKAGVL N+R W+ + YS GCCA RNNR + S
Sbjct: 213 TELCFNCNACKAGVLANIREKWRNLLVFNICLLILLITVYSCGCCARRNNRTARKS 268
>AT3G45600.1 | chr3:16733973-16735854 REVERSE LENGTH=286
Length = 285
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 131/243 (53%), Gaps = 18/243 (7%)
Query: 38 GGGV--------TECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXX 89
GGG+ T+C RFL+ P + +G +I+ VSLAG AGAC R
Sbjct: 24 GGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAGACYRNKFLMWLYLVVMLLII 83
Query: 90 XXXXCFGVFALVVTNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTG 149
F +FA VT+ G+GR V RG+ +Y+L DYS WL+ V D +W +I SCL D+G
Sbjct: 84 AALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGWLKDRVSDDSYWGKISSCLRDSG 143
Query: 150 VCRSLKSN-----QTLDEFVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSDP 204
CR + N +T D F LSP++SGCCKPPT C F+Y NET W T P
Sbjct: 144 ACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYVNETGW---DTRGGMIGP 200
Query: 205 --DCNSWSNDQSELCYGCQSCKAGVLGNLRSSWKKIXXXXXXXXXXXXXXYSLGCCALRN 262
DC WSNDQS LCY C SCKAGVLG+L+ SW+K+ Y + A RN
Sbjct: 201 NQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRN 260
Query: 263 NRR 265
+R
Sbjct: 261 VKR 263
>AT5G60220.1 | chr5:24248957-24250065 FORWARD LENGTH=328
Length = 327
Score = 171 bits (432), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 135/241 (56%), Gaps = 14/241 (5%)
Query: 38 GGGV--------TECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXX 89
GGG+ T+C RFL+ P + +G +I+ +SLAG+AGAC +
Sbjct: 24 GGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGACYQNKFLMWLYLFTMFFVI 83
Query: 90 XXXXCFGVFALVVTNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTG 149
F +FA VVT+ G+GR V R + +Y+L DYS WL+ V D G+W I SC+ D+G
Sbjct: 84 AALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKDRVTDNGYWRDIGSCVRDSG 143
Query: 150 VCRSLKSN-----QTLDEFVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSDP 204
VC+ + + +T F NLSP++SGCCKPPT C +TY NET WI P +P
Sbjct: 144 VCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYVNETVWI-PGGEMVGPNP 202
Query: 205 DCNSWSNDQSELCYGCQSCKAGVLGNLRSSWKKIXXXXXXXXXXXXXXYSLGCCALRNNR 264
DC W+NDQ LCY C SCKAGVLG+L+ SW+K+ Y + C A +N +
Sbjct: 203 DCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVIILVIFYVIACAAYQNVK 262
Query: 265 R 265
R
Sbjct: 263 R 263
>AT5G46700.1 | chr5:18951035-18952439 FORWARD LENGTH=270
Length = 269
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 117/225 (52%), Gaps = 3/225 (1%)
Query: 39 GGVTECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVF 98
G V C + L+ P + LG I+ V LAG G R T C F
Sbjct: 32 GTVNSCVKLLQWPVIILGVLILLVGLAGFIGGFWRITWLLVVYLIAMLILIVLLGCLVGF 91
Query: 99 ALVVTNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTGVCRSLKSNQ 158
+VT G+G R + EY L D+S WLRR V+ W RIR+CL T +C L
Sbjct: 92 IYMVTIRGSGHPEPSRAYLEYSLQDFSGWLRRRVQRSYKWERIRTCLSTTTICPELNQRY 151
Query: 159 TL-DEFVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSDPDCNSWSNDQSELC 217
TL +F N++L P+QSGCCKPPT C FT+ N TYWI P S +D DC +WSNDQ+ LC
Sbjct: 152 TLAQDFFNAHLDPIQSGCCKPPTKCGFTFVNPTYWISPIDMS--ADMDCLNWSNDQNTLC 209
Query: 218 YGCQSCKAGVLGNLRSSWKKIXXXXXXXXXXXXXXYSLGCCALRN 262
Y C SCKAG+L N++ W K Y +GCCA RN
Sbjct: 210 YTCDSCKAGLLANIKVDWLKADIFLLLALIGLIIVYIIGCCAFRN 254
>AT2G19580.1 | chr2:8472393-8475021 REVERSE LENGTH=271
Length = 270
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 116/222 (52%), Gaps = 4/222 (1%)
Query: 43 ECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFALVV 102
EC LR P + LG I+ VS G GA +FA VV
Sbjct: 36 ECVNLLRWPVVVLGVLILVVSATGFIGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVV 95
Query: 103 TNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTGVCRSLKSN-QTLD 161
T V GRG++EY L +S WL+ +V D +W R+R+CL DT VC L T D
Sbjct: 96 TRPDGSYRVPGRGYKEYRLEGFSNWLKENVVDSKNWGRLRACLADTNVCPKLNQEFITAD 155
Query: 162 EFVNSN-LSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSDPDCNSWSNDQSELCYGC 220
+F +S+ ++PLQSGCCKPPTAC + + N T W+ P + +D DC WSNDQS+LCY C
Sbjct: 156 QFFSSSKITPLQSGCCKPPTACGYNFVNPTLWLNPTNMA--ADADCYLWSNDQSQLCYNC 213
Query: 221 QSCKAGVLGNLRSSWKKIXXXXXXXXXXXXXXYSLGCCALRN 262
SCKAG+LGNLR W+K Y + C A RN
Sbjct: 214 NSCKAGLLGNLRKEWRKANLILIITVVVLIWVYVIACSAFRN 255
>AT3G12090.1 | chr3:3852326-3853714 REVERSE LENGTH=283
Length = 282
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 112/231 (48%), Gaps = 18/231 (7%)
Query: 42 TECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFALV 101
T CE FL+ P L +G I+ VSLAG GAC +F LV
Sbjct: 35 TTCENFLQTPLLVIGFIILIVSLAGFIGACFNVAWALWVYLVVMIFLIATLMGLTLFGLV 94
Query: 102 VTNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTGVCRSLKSNQTLD 161
VT+ G G V GR ++EY LGDY WLR V D +W IRSC++ + C ++S TLD
Sbjct: 95 VTSQGGGVEVPGRIYKEYRLGDYHPWLRERVRDPEYWNSIRSCILSSKTCTKIESWTTLD 154
Query: 162 EFVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSD--PDCNSWSNDQSELCYG 219
F +++ +QSGCCKPPTAC + + D DC W+N LCY
Sbjct: 155 YF-QRDMTSVQSGCCKPPTACTY-------------EAGVVDGGGDCFRWNNGVEMLCYE 200
Query: 220 CQSCKAGVLGNLRSSWKKIXXXXXXXXXXXXXXYSLGCCALRNNRR--HKY 268
C +CKAGVL +R W+K+ Y+ GCCA N R H Y
Sbjct: 201 CDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCAFHNTRHAAHPY 251
>AT4G23410.1 | chr4:12224094-12225206 FORWARD LENGTH=282
Length = 281
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 124/265 (46%), Gaps = 17/265 (6%)
Query: 4 RCSNAVFAAINXXXXXXXXXXXXXXIYYGAPHRGGGGVTECERFLRAPALALGGAIVAVS 63
R SN V +N + G+ G T CE FL+ P L LG AI+ +S
Sbjct: 3 RMSNTVIGFLNILTLISSI------VLLGSALWMGRSKTTCEHFLQKPLLILGLAILILS 56
Query: 64 LAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFALVVTNAGAGRAVSGRGFREYHLGD 123
+AGL GACC +F +VT+ G V GR ++E+ L
Sbjct: 57 VAGLVGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEA 116
Query: 124 YSTWLRRSVEDGGHWARIRSCLVDTGVCRSLKSNQTLDEFVNSNLSPLQSGCCKPPTACN 183
Y WL+ V D +W I++CL+ + C L LD ++ +LSPLQSGCCKPPT+C
Sbjct: 117 YHPWLKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLD-YLQKDLSPLQSGCCKPPTSC- 174
Query: 184 FTYQNETYWIKPPTPSNYSDPDCNSWSNDQSELCYGCQSCKAGVLGNLRSSWKKIXXXXX 243
Y +T DPDC W+N + LCY C +C+AGVL +R W K+
Sbjct: 175 -VYNTDT--------VIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNV 225
Query: 244 XXXXXXXXXYSLGCCALRNNRRHKY 268
Y +GCCA +N +R ++
Sbjct: 226 IVVIFLIAVYCVGCCAFKNAKRPQH 250
>AT1G63260.1 | chr1:23467105-23468945 REVERSE LENGTH=285
Length = 284
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 2/196 (1%)
Query: 44 CERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFALVVT 103
C R L P +ALGG I +S+ G GAC R+ F V A +VT
Sbjct: 38 CRRSLTFPVIALGGFIFLISIIGFLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVT 97
Query: 104 NAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTGVCRSL-KSNQTLDE 162
N G+G G ++EY L DYS+W + + + +W R++SCLV + CR L K +T+ +
Sbjct: 98 NNGSGHTNPGLRYKEYKLNDYSSWFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQ 157
Query: 163 FVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSDPDCNSWSNDQSELCYGCQS 222
++ L+P+++GCC+PP+ C + N +Y+ S S+ DC + N ++ CY C S
Sbjct: 158 LKSAELTPIEAGCCRPPSECGYPAVNASYY-DLSFHSISSNKDCKLYKNLRTIKCYNCDS 216
Query: 223 CKAGVLGNLRSSWKKI 238
CKAGV +++ W+ +
Sbjct: 217 CKAGVAQYMKTEWRLV 232
>AT5G23030.1 | chr5:7726819-7727709 FORWARD LENGTH=265
Length = 264
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Query: 40 GVTECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFA 99
G ++C+RF++ P + + +S GL A + VF
Sbjct: 34 GPSQCQRFVQNPLIVTAALLFFISSLGLIAALYGSHIIITLYLFFLFLSILLLLVLSVFI 93
Query: 100 LVVTNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTGVCRSLKSNQT 159
+VTN AG+A+SGRG GDY W+ G +W I CL D+ VC+
Sbjct: 94 FLVTNPTAGKALSGRGIGNVKTGDYQNWIGNHFLRGKNWEGITKCLSDSRVCKRFGPRDI 153
Query: 160 LDEFVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSDPDCNSWSNDQSELCYG 219
+F + +LS +Q GCC+PP C F +N T+W P T + DC +WSN Q +LCY
Sbjct: 154 --DFDSKHLSNVQFGCCRPPVECGFESKNATWWTVPATATTAIIGDCKAWSNTQRQLCYA 211
Query: 220 CQSCKAGVLGNLRSSWKKIXXXXXXXXXXXXXXYSLGCCALRNNR 264
C+SCK GVL +R W+ + YS GCC +NNR
Sbjct: 212 CESCKIGVLKGIRKRWRILIVVNLLLILLVVFLYSCGCCVRKNNR 256
>AT2G03840.1 | chr2:1173170-1174115 FORWARD LENGTH=279
Length = 278
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 1/192 (0%)
Query: 43 ECERFLRAPALALGGAIVAVSLAGLAGACCRATPXXXXXXXXXXXXXXXXXCFGVFALVV 102
EC RF+ P + + +++A+SL G A ++ +F + +
Sbjct: 54 ECNRFVTTPGIFISFSLLAMSLTGFYAAYFKSDCLFRIHFFIFFLWMFVVVSKAIFVIFL 113
Query: 103 TNAGAGRAVSGRGFREYHLGDYSTWLRRSVEDGGHWARIRSCLVDTGVCRSLKSNQTLDE 162
R G E+ DYS W+ R V W R R CLV VC L E
Sbjct: 114 HKETNPRLFPGTKIYEFRYEDYSGWVSRLVIKDDEWYRTRRCLVKDNVCNRLNHKMPASE 173
Query: 163 FVNSNLSPLQSGCCKPPTACNFTYQNETYWIKPPTPSNYSDPDCNSWSNDQSELCYGCQS 222
F NL+P+QSGCCKPP +C Y+ W +N + DC W+N LC+ C S
Sbjct: 174 FYQMNLTPIQSGCCKPPLSCGLNYEKPNNWTVSRYYNNL-EVDCKRWNNSADTLCFDCDS 232
Query: 223 CKAGVLGNLRSS 234
CKA ++ ++ ++
Sbjct: 233 CKAVIIADVHNT 244
>AT5G57810.1 | chr5:23424466-23425589 REVERSE LENGTH=318
Length = 317
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 126 TWLR-RSVEDGGHWARIRSCLVDTGVCRSLKSNQTLDEFVNS-NLSPLQSGCCKPPTACN 183
W + + ++D W I+SC+ D G C L ++ N + P+++GCC PP CN
Sbjct: 160 MWFKLKIMDDHVTWNNIKSCVYDKGACNDLIYGSPNEKPYNRRKMPPIKNGCCMPPETCN 219
Query: 184 FTYQNETYWIK-----PPTPSN--YSDP-------DCNSWSNDQSELCYGCQSCKAGVLG 229
N T+W + PP+ N Y D DC W ND S LCY C+SCK G +
Sbjct: 220 MDAINATFWYRRKDEGPPSSMNLMYGDEMMVGRISDCQLWRNDWSILCYDCRSCKFGFIR 279
Query: 230 NLRSSWKKI 238
++R W ++
Sbjct: 280 SVRRKWWQL 288
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,767,994
Number of extensions: 236395
Number of successful extensions: 540
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 502
Number of HSP's successfully gapped: 14
Length of query: 273
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 176
Effective length of database: 8,447,217
Effective search space: 1486710192
Effective search space used: 1486710192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)