Os05g0122800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CD9/CD37/CD63 antigen family protein.
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Os05g0122800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CD9/CD37/CD63 antigen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.66 | 0.324 | 13.2 | -0.859 | 0.132 | 1.58 | -0.898 | -2.02 | -0.0693 | 17.1 | 16.4 | 737 | -- | -- |
| 50.26 | 0.33 | 13.2 | -0.473 | 0.189 | 1.61 | -1.14 | -- | 0.0425 | 18.1 | 14.23 | 773 | -- | -- |
| 49.25 | 0.327 | 13.2 | -0.951 | 0.0995 | 1.47 | -- | -2.58 | -0.103 | 21.3 | 17.76 | 657 | -- | -- |
| 52.08 | 0.336 | 13.2 | -0.521 | 0.384 | 1.4 | -- | -- | 0.0231 | 19.9 | 13.59 | 2009 | -- | -- |
| 49.72 | 0.328 | 13.2 | -0.971 | -- | 1.54 | -- | -2.57 | -0.112 | -- | 17.85 | 663 | -- | -- |
| 84.64 | 0.431 | 13.1 | -0.063 | 0.51 | -- | -0.657 | -- | 0.291 | 19.8 | -- | -- | -- | -- |
| 85.78 | 0.434 | 13.1 | -0.0475 | 0.509 | -- | -- | -- | 0.29 | 20.2 | -- | -- | -- | -- |
| 54.38 | 0.343 | 13.2 | -0.477 | -- | 1.71 | -- | -- | 0.0253 | -- | 12.75 | 700 | -- | -- |
| 58.12 | 0.355 | 13.2 | -- | 0.419 | 1.18 | -- | -- | 0.115 | 20 | 13.89 | 1921 | -- | -- |
| 100.03 | 0.467 | 13.1 | -0.0515 | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
| 85.84 | 0.433 | 13.1 | -- | 0.509 | -- | -- | -- | 0.295 | 20.2 | -- | -- | -- | -- |
| 59.74 | 0.36 | 13.2 | -- | -- | 1.54 | -- | -- | 0.101 | -- | 9.329 | 668 | -- | -- |
| 100.1 | 0.467 | 13.1 | -- | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 34 | 47.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 41 | 47.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 60 | 47.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 21 |
| 63 | 47.87 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 68 | 47.96 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 70 | 47.96 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 80 | 47.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 81 | 47.99 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 85 | 48.01 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 181 | 48.20 | temperature | 15 | 1440 | > th | dose dependent | sin | 15 | NA |
| 196 | 48.25 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 214 | 48.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 18 |
| 215 | 48.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 229 | 48.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 276 | 48.40 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 287 | 48.41 | radiation | 1 | 43200 | < th | dose dependent | rect. | 15 | 14 |
| 291 | 48.42 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 22 |
| 304 | 48.44 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 305 | 48.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 311 | 48.44 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 315 | 48.45 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 12 |
| 320 | 48.45 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 15 |
| 321 | 48.45 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 17 |
| 326 | 48.45 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 22 |
| 327 | 48.45 | radiation | 1 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 365 | 48.48 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 385 | 48.49 | radiation | 1 | 43200 | < th | dose independent | sin | 14 | NA |
| 387 | 48.49 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 19 |
| 402 | 48.50 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 429 | 48.52 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 462 | 48.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 463 | 48.55 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 530 | 48.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 548 | 48.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 14 |
| 604 | 48.66 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 627 | 48.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 651 | 48.68 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 655 | 48.69 | radiation | 1 | 43200 | > th | dose independent | sin | 14 | NA |
| 681 | 48.71 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 751 | 48.75 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 754 | 48.75 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 772 | 48.76 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 782 | 48.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 15 | 21 |
| 808 | 48.78 | radiation | 1 | 43200 | < th | dose dependent | sin | 15 | NA |
| 826 | 48.79 | radiation | 1 | 43200 | < th | dose independent | rect. | 2 | 17 |
| 862 | 48.80 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 863 | 48.80 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 866 | 48.80 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 917 | 48.81 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 977 | 48.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 2 | 16 |