Os02g0219700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CD9/CD37/CD63 antigen family protein.
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Os02g0219700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CD9/CD37/CD63 antigen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.14 | 0.536 | 7.85 | 2.4 | 0.161 | -1.43 | 0.723 | -0.107 | 0.332 | 21.6 | 21.3 | 908 | -- | -- |
| 130.17 | 0.531 | 7.84 | 2.42 | 0.16 | -1.42 | 0.691 | -- | 0.338 | 21.5 | 21.31 | 907 | -- | -- |
| 131.74 | 0.535 | 7.84 | 2.46 | 0.157 | -1.43 | -- | 0.178 | 0.341 | 20.8 | 21.2 | 906 | -- | -- |
| 131.82 | 0.535 | 7.84 | 2.42 | 0.156 | -1.44 | -- | -- | 0.335 | 20.9 | 21.27 | 915 | -- | -- |
| 132.94 | 0.537 | 7.83 | 2.46 | -- | -1.4 | -- | 0.174 | 0.34 | -- | 21.29 | 966 | -- | -- |
| 195.66 | 0.656 | 7.92 | 1.89 | 0.12 | -- | -0.728 | -- | -0.0498 | 12.2 | -- | -- | -- | -- |
| 197.86 | 0.659 | 7.93 | 1.86 | 0.13 | -- | -- | -- | -0.0523 | 13.5 | -- | -- | -- | -- |
| 133.02 | 0.537 | 7.84 | 2.42 | -- | -1.41 | -- | -- | 0.33 | -- | 21.29 | 966 | -- | -- |
| 260.07 | 0.751 | 7.91 | -- | 0.0971 | -0.783 | -- | -- | -0.0172 | 21 | 22.4 | 859 | -- | -- |
| 198.9 | 0.659 | 7.93 | 1.86 | -- | -- | -- | -- | -0.0551 | -- | -- | -- | -- | -- |
| 289.44 | 0.796 | 7.97 | -- | 0.0986 | -- | -- | -- | -0.26 | 12.8 | -- | -- | -- | -- |
| 260.4 | 0.752 | 7.92 | -- | -- | -0.771 | -- | -- | -0.022 | -- | 22.3 | 889 | -- | -- |
| 290.05 | 0.795 | 7.97 | -- | -- | -- | -- | -- | -0.261 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.67 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 3 | 127.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 6 | 127.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 7 | 127.83 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 14 | 128.67 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 5 |
| 16 | 128.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 18 | 128.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 43 | 129.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 45 | 129.57 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 68 | 130.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 70 | 130.25 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 82 | 130.51 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 127 | 131.47 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 13 |
| 129 | 131.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 157 | 132.05 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 173 | 132.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 179 | 132.52 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 199 | 132.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 210 | 133.15 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 16 |
| 223 | 133.38 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 15 |
| 276 | 134.06 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 12 |
| 278 | 134.08 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 16 |
| 318 | 134.51 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 18 |
| 360 | 135.00 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 482 | 136.34 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 558 | 137.01 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 571 | 137.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 638 | 137.74 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 19 |
| 728 | 138.34 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 778 | 138.68 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 780 | 138.69 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 21 |
| 942 | 139.59 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |