BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0114000 Os05g0114000|AK069313
(216 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0114000 Similar to PRLI-interacting factor F (Fragment) 443 e-125
Os04g0687100 Similar to Soluble inorganic pyrophosphatase (... 357 3e-99
Os10g0406100 Similar to PRLI-interacting factor F (Fragment) 356 6e-99
Os02g0704900 Similar to Inorganic pyrophosphatase-like protein 355 1e-98
Os05g0438500 Similar to Soluble inorganic pyrophosphatase (... 352 1e-97
Os01g0866500 Similar to Soluble inorganic pyrophosphatase (... 339 9e-94
Os01g0322300 Inorganic pyrophosphatase family protein 88 4e-18
Os01g0974700 Inorganic pyrophosphatase family protein 79 3e-15
Os02g0768600 Similar to Chloroplast inorganic pyrophosphata... 79 3e-15
>Os05g0114000 Similar to PRLI-interacting factor F (Fragment)
Length = 216
Score = 443 bits (1139), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MAPAVEAVEKKTGSAPVKAPALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIP 60
MAPAVEAVEKKTGSAPVKAPALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIP
Sbjct: 1 MAPAVEAVEKKTGSAPVKAPALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIP 60
Query: 61 RGSKVKYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGC 120
RGSKVKYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGC
Sbjct: 61 RGSKVKYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGC 120
Query: 121 FLRAKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNE 180
FLRAKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNE
Sbjct: 121 FLRAKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNE 180
Query: 181 NKEVAVNDFLPASAAYEAIKHSMDLYATYIVEGLRR 216
NKEVAVNDFLPASAAYEAIKHSMDLYATYIVEGLRR
Sbjct: 181 NKEVAVNDFLPASAAYEAIKHSMDLYATYIVEGLRR 216
>Os04g0687100 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 213
Score = 357 bits (916), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 168/211 (79%), Positives = 190/211 (90%), Gaps = 3/211 (1%)
Query: 9 EKKTGSA---PVKAPALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIPRGSKV 65
E+ T +A P +AP LNERILSS+SRRS+AAHPWHDLEIGPGAP +FN V+EI +GSKV
Sbjct: 3 EEDTNAAAGQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGSKV 62
Query: 66 KYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGCFLRAK 125
KYELDKKTGLI VDRVLYSSVVYPHNYGFIPRTLCED+DP+DVLV+MQEPVIPG FLRA+
Sbjct: 63 KYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLRAR 122
Query: 126 AIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKEVA 185
AIGLMPMIDQGE DDKIIAVCADDPEY+HYNDI EL PHRL EI+RFFEDYKKNENKEVA
Sbjct: 123 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEVA 182
Query: 186 VNDFLPASAAYEAIKHSMDLYATYIVEGLRR 216
V+ FLPA+ A +AI++SMDLYA YI++ LR+
Sbjct: 183 VDAFLPANTARDAIQYSMDLYAQYILQSLRQ 213
>Os10g0406100 Similar to PRLI-interacting factor F (Fragment)
Length = 204
Score = 356 bits (914), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 165/199 (82%), Positives = 182/199 (91%)
Query: 18 KAPALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIPRGSKVKYELDKKTGLIV 77
K P LNERILSS+S+RS+AAH WHDLEIGPGAP +FN V+EI +GSKVKYELDKKTG+I
Sbjct: 6 KTPCLNERILSSLSKRSVAAHSWHDLEIGPGAPQVFNVVVEITKGSKVKYELDKKTGMIK 65
Query: 78 VDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGCFLRAKAIGLMPMIDQGE 137
VDRVLYSSVVYPHNYGFIPRTLCED DP+DVLV+MQEPVIPGC+LRAKAIGLMPMIDQGE
Sbjct: 66 VDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEPVIPGCYLRAKAIGLMPMIDQGE 125
Query: 138 ADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAYE 197
DDKIIAVC DDPE++H+ND+KEL PHRLAEIRRFFEDYKKNENKEVAVNDFLP + A E
Sbjct: 126 KDDKIIAVCVDDPEFRHFNDLKELSPHRLAEIRRFFEDYKKNENKEVAVNDFLPPATAQE 185
Query: 198 AIKHSMDLYATYIVEGLRR 216
AIK+SMDLYA YI+ LRR
Sbjct: 186 AIKYSMDLYAEYILHSLRR 204
>Os02g0704900 Similar to Inorganic pyrophosphatase-like protein
Length = 214
Score = 355 bits (912), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/213 (79%), Positives = 185/213 (86%), Gaps = 8/213 (3%)
Query: 12 TGSAPVKAP--------ALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIPRGS 63
G A KAP ALNERILSSMS++ +AAHPWHDLEIGPGAP +FNCV+EIPRGS
Sbjct: 2 AGEADGKAPLGSRYPPAALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGS 61
Query: 64 KVKYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGCFLR 123
KVKYELDK TGLI VDRVLYSSVVYPHNYGFIPRTLCED DP+DVLV+MQE V+PGCFLR
Sbjct: 62 KVKYELDKATGLIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLR 121
Query: 124 AKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKE 183
A+AIGLMPMIDQGE DDKIIAVCADDPEY+H+ DIKE+PPHRL EIRRFFEDYKKNENKE
Sbjct: 122 ARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDYKKNENKE 181
Query: 184 VAVNDFLPASAAYEAIKHSMDLYATYIVEGLRR 216
VAVN+FLPA A AIK+SMDLY YI+E LR+
Sbjct: 182 VAVNEFLPAEDAINAIKYSMDLYGAYIIESLRK 214
>Os05g0438500 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 224
Score = 352 bits (902), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 164/213 (76%), Positives = 186/213 (87%)
Query: 4 AVEAVEKKTGSAPVKAPALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIPRGS 63
A + V + P P LNERILSS+SRRS+AAHPWHDLEIGP AP +FN V+EI +GS
Sbjct: 12 AADEVVEPYQQTPRPGPKLNERILSSLSRRSVAAHPWHDLEIGPDAPAVFNVVVEITKGS 71
Query: 64 KVKYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGCFLR 123
KVKYELDKKTGLI VDR+LYSSVVYPHNYGFIPRTLCED+DP+DVLV+MQEPV+PG FLR
Sbjct: 72 KVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVLPGSFLR 131
Query: 124 AKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKE 183
A+AIGLMPMIDQGE DDKIIAVCADDPEY+H+N++ EL PHRL EIRRFFEDYKKNENKE
Sbjct: 132 ARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFNNLSELSPHRLQEIRRFFEDYKKNENKE 191
Query: 184 VAVNDFLPASAAYEAIKHSMDLYATYIVEGLRR 216
VAVNDFLPA A EAI++SMDLYA YI++ L+R
Sbjct: 192 VAVNDFLPAPTAREAIQYSMDLYAQYILQSLKR 224
>Os01g0866500 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 212
Score = 339 bits (870), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 158/199 (79%), Positives = 179/199 (89%), Gaps = 1/199 (0%)
Query: 13 GSAPVK-APALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIPRGSKVKYELDK 71
G+ P + AP LNERILSS+SRRS+AAHPWHDL+ G AP +FN V+EI +GSKVKYELDK
Sbjct: 9 GAKPKRPAPRLNERILSSLSRRSVAAHPWHDLDTGADAPAVFNVVVEISKGSKVKYELDK 68
Query: 72 KTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGCFLRAKAIGLMP 131
KTG I+VDRVLYSSVVYPHNYGFIPRTLCED+DP+DVLV+MQEPVIPGCFLRA+AIGLMP
Sbjct: 69 KTGFIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGCFLRARAIGLMP 128
Query: 132 MIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLP 191
MIDQGE DDKIIAVC DDPEY+HYND+ EL PHR+ EIRRFFEDYKKNENKEVAVN+ LP
Sbjct: 129 MIDQGEKDDKIIAVCVDDPEYRHYNDLSELSPHRVQEIRRFFEDYKKNENKEVAVNEVLP 188
Query: 192 ASAAYEAIKHSMDLYATYI 210
+AA +AI++SMDLYA YI
Sbjct: 189 VTAARDAIQYSMDLYAQYI 207
>Os01g0322300 Inorganic pyrophosphatase family protein
Length = 65
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 50/63 (79%)
Query: 145 VCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAYEAIKHSMD 204
VCADDPE+ HYNDI EL PH L EI+R FEDYKKNE K+V + FLP + A +AI++S+D
Sbjct: 3 VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
Query: 205 LYA 207
LYA
Sbjct: 63 LYA 65
>Os01g0974700 Inorganic pyrophosphatase family protein
Length = 79
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 78 VDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQ 113
VDRVLYSSVVYPHNYGFIPRTLC+DSDPLDVLVIMQ
Sbjct: 27 VDRVLYSSVVYPHNYGFIPRTLCDDSDPLDVLVIMQ 62
>Os02g0768600 Similar to Chloroplast inorganic pyrophosphatase (EC 3.6.1.1)
Length = 294
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 23/161 (14%)
Query: 39 PWHDLEIGPGAPTIFNCVIEIPRGSKVKYEL--DKKTGLIVVDRVLYSSVVYPHN----Y 92
PWHD+ + G +F+ V+EIP+ S K E+ D+ I D + YP+N Y
Sbjct: 86 PWHDVPLRAGD-GVFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRYYPYNINWNY 144
Query: 93 GFIPRTLCE-------------DSDPLDVLVIMQEPVIPGCFLRAKAIGLMPMIDQGEAD 139
G P+T + D+DP+DV+ I + G L+ K + + MID+GE D
Sbjct: 145 GLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELD 204
Query: 140 DKIIAVCADDPEYKHYNDIKELPPH---RLAEIRRFFEDYK 177
KI+A+ DDP+ ND+ ++ H L IR +F DYK
Sbjct: 205 WKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYK 245
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,748,074
Number of extensions: 329470
Number of successful extensions: 660
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 659
Number of HSP's successfully gapped: 9
Length of query: 216
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 119
Effective length of database: 11,971,043
Effective search space: 1424554117
Effective search space used: 1424554117
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)