Os01g0974700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Inorganic pyrophosphatase family protein.
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Os01g0974700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Inorganic pyrophosphatase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.25 | 0.426 | 10.5 | -0.128 | 0.59 | 1.05 | -0.757 | -0.218 | 0.581 | 23.1 | 93 | 223 | -- | -- |
| 81.69 | 0.421 | 10.5 | -0.107 | 0.576 | 1.26 | -0.684 | -- | 0.573 | 23 | 93.81 | 198 | -- | -- |
| 84.03 | 0.427 | 10.5 | -0.123 | 0.619 | 1.18 | -- | -0.145 | 0.553 | 23 | 93.79 | 188 | -- | -- |
| 83.75 | 0.426 | 10.5 | -0.0802 | 0.611 | 1.37 | -- | -- | 0.569 | 23.1 | 94 | 188 | -- | -- |
| 105.7 | 0.479 | 10.5 | -0.0897 | -- | 1.09 | -- | -0.534 | 0.592 | -- | 93.25 | 175 | -- | -- |
| 95.45 | 0.458 | 10.5 | -0.0554 | 0.653 | -- | -0.732 | -- | 0.468 | 0.696 | -- | -- | -- | -- |
| 97.72 | 0.463 | 10.5 | -0.0283 | 0.656 | -- | -- | -- | 0.471 | 0.766 | -- | -- | -- | -- |
| 105.97 | 0.479 | 10.4 | -0.0891 | -- | 1.1 | -- | -- | 0.587 | -- | 93.4 | 176 | -- | -- |
| 83.92 | 0.427 | 10.5 | -- | 0.611 | 1.36 | -- | -- | 0.577 | 23.1 | 94 | 188 | -- | -- |
| 124.58 | 0.522 | 10.5 | -0.00451 | -- | -- | -- | -- | 0.483 | -- | -- | -- | -- | -- |
| 97.74 | 0.462 | 10.5 | -- | 0.655 | -- | -- | -- | 0.475 | 0.764 | -- | -- | -- | -- |
| 106.18 | 0.48 | 10.4 | -- | -- | 1.1 | -- | -- | 0.595 | -- | 93.44 | 176 | -- | -- |
| 124.58 | 0.521 | 10.5 | -- | -- | -- | -- | -- | 0.484 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.33 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 80.97 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 5 | 81.33 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 8 | 81.54 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 12 | 81.80 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 15 | 81.84 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 18 | 81.87 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 23 | 82.02 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 24 | 82.04 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 28 | 82.23 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 29 | 82.25 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 45 | 82.48 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 46 | 82.51 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 48 | 82.55 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 49 | 82.55 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 74 | 82.96 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 92 | 83.20 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 109 | 83.32 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 111 | 83.34 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 127 | 83.53 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 142 | 83.61 | temperature | 25.0 | 270 | > th | dose independent | sin | 9 | NA |
| 148 | 83.67 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 158 | 83.72 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 161 | 83.75 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 173 | 83.83 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 24 | 2 |
| 178 | 83.86 | temperature | 25.0 | 270 | < th | dose independent | sin | 9 | NA |
| 179 | 83.86 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 181 | 83.87 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 6 |
| 192 | 83.93 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 199 | 83.97 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 20 |
| 200 | 83.97 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 223 | 84.04 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 233 | 84.12 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 14 |
| 236 | 84.15 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 9 | 22 |
| 239 | 84.17 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 21 |
| 245 | 84.20 | humidity | 90.0 | 90 | > th | dose independent | sin | 0 | NA |
| 267 | 84.28 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 299 | 84.38 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 309 | 84.41 | humidity | 90.0 | 90 | > th | dose dependent | sin | 23 | NA |
| 310 | 84.41 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 312 | 84.42 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 19 |
| 314 | 84.42 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 335 | 84.50 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 353 | 84.56 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 354 | 84.56 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 364 | 84.60 | humidity | 90.0 | 90 | < th | dose independent | sin | 1 | NA |
| 368 | 84.62 | temperature | 25.0 | 90 | < th | dose independent | rect. | 13 | 20 |
| 370 | 84.63 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 385 | 84.66 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 391 | 84.67 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 10 |
| 397 | 84.68 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 398 | 84.68 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 399 | 84.68 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 435 | 84.76 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 448 | 84.78 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 23 |
| 449 | 84.79 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 451 | 84.79 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 463 | 84.81 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 479 | 84.85 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 14 |
| 485 | 84.86 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 493 | 84.87 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 497 | 84.88 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 520 | 84.94 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 523 | 84.94 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 525 | 84.95 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 541 | 84.99 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 21 | 8 |
| 547 | 85.00 | temperature | 25.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 552 | 85.01 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 5 |
| 554 | 85.01 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 562 | 85.01 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 12 |
| 572 | 85.02 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 593 | 85.04 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 600 | 85.05 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 615 | 85.07 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 621 | 85.09 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 628 | 85.11 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 5 |
| 654 | 85.15 | atmosphere | 1000.0 | 10 | > th | dose independent | no | NA | NA |
| 656 | 85.15 | atmosphere | 1000.0 | 10 | < th | dose independent | no | NA | NA |
| 660 | 85.15 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 671 | 85.16 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 672 | 85.16 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 673 | 85.16 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 23 |
| 679 | 85.16 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 684 | 85.17 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 691 | 85.18 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 696 | 85.18 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 23 |
| 705 | 85.19 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 718 | 85.20 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 723 | 85.21 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 727 | 85.21 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 746 | 85.25 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 758 | 85.26 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 774 | 85.28 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 17 |
| 789 | 85.29 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 813 | 85.31 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 23 |
| 831 | 85.33 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 849 | 85.34 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 876 | 85.36 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 902 | 85.39 | humidity | 90.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 918 | 85.41 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 930 | 85.41 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 931 | 85.42 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 969 | 85.44 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 971 | 85.44 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 7 | 19 |