Os05g0438500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase).
FiT-DB / Search/ Help/ Sample detail
|
Os05g0438500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 535.49 | 1.09 | 5.47 | -0.715 | 1.99 | -2.06 | -0.964 | 3.85 | -0.206 | 7.49 | 68.35 | 379 | -- | -- |
| 557.9 | 1.1 | 5.47 | -0.545 | 2.12 | -2.07 | 0.142 | -- | -0.168 | 8.51 | 70.21 | 577 | -- | -- |
| 537.6 | 1.08 | 5.46 | -0.713 | 2.01 | -2.08 | -- | 3.51 | -0.188 | 7.49 | 68.42 | 383 | -- | -- |
| 557.86 | 1.1 | 5.47 | -0.537 | 2.11 | -2.06 | -- | -- | -0.166 | 8.53 | 70.22 | 577 | -- | -- |
| 605.17 | 1.15 | 5.55 | -0.921 | -- | -2.2 | -- | 3.26 | -0.272 | -- | 65.58 | 1523 | -- | -- |
| 619.48 | 1.17 | 5.46 | -0.542 | 1.05 | -- | -0.528 | -- | 0.0171 | 10.4 | -- | -- | -- | -- |
| 620.55 | 1.17 | 5.46 | -0.564 | 1.06 | -- | -- | -- | 0.0148 | 10.3 | -- | -- | -- | -- |
| 618.94 | 1.16 | 5.53 | -0.562 | -- | -2 | -- | -- | -0.196 | -- | 66.16 | 1526 | -- | -- |
| 565.26 | 1.11 | 5.46 | -- | 2.1 | -2.06 | -- | -- | -0.112 | 8.54 | 71.15 | 571 | -- | -- |
| 688.37 | 1.23 | 5.49 | -0.58 | -- | -- | -- | -- | 0.0122 | -- | -- | -- | -- | -- |
| 628.94 | 1.17 | 5.45 | -- | 1.06 | -- | -- | -- | 0.0776 | 10.3 | -- | -- | -- | -- |
| 626.74 | 1.17 | 5.53 | -- | -- | -2.1 | -- | -- | -0.166 | -- | 69 | 1525 | -- | -- |
| 697.24 | 1.23 | 5.48 | -- | -- | -- | -- | -- | 0.0765 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 527.00 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 10 | 530.40 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 13 | 530.61 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 9 |
| 36 | 533.02 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 6 | 16 |
| 53 | 533.96 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 63 | 534.56 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 91 | 536.34 | humidity | 90.0 | 270 | < th | dose independent | sin | 22 | NA |
| 96 | 536.54 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 100 | 536.68 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 115 | 537.29 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 18 | 18 |
| 178 | 539.53 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 22 | 15 |
| 179 | 539.58 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 1 | 12 |
| 216 | 540.31 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 221 | 540.37 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 240 | 540.65 | humidity | 80.0 | 270 | > th | dose dependent | sin | 22 | NA |
| 249 | 540.88 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 272 | 541.32 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 284 | 541.57 | humidity | 90.0 | 270 | > th | dose independent | rect. | 6 | 17 |
| 308 | 541.88 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 310 | 541.90 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 315 | 542.00 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 348 | 542.49 | humidity | 70.0 | 270 | > th | dose dependent | no | NA | NA |
| 352 | 542.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 394 | 542.92 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 411 | 543.05 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 458 | 543.61 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 485 | 543.83 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 510 | 544.11 | humidity | 90.0 | 270 | > th | dose independent | sin | 22 | NA |
| 534 | 544.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 539 | 544.37 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 544 | 544.39 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 576 | 544.63 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 590 | 544.70 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 607 | 544.81 | humidity | 90.0 | 720 | < th | dose independent | rect. | 4 | 18 |
| 623 | 544.86 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 20 |
| 636 | 544.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 794 | 546.04 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 20 | 8 |
| 807 | 546.12 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 830 | 546.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 837 | 546.34 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 16 |
| 847 | 546.40 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 926 | 546.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 988 | 547.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 989 | 547.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 5 |