BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0687100 Os04g0687100|AK073929
(213 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0687100 Similar to Soluble inorganic pyrophosphatase (... 441 e-124
Os05g0438500 Similar to Soluble inorganic pyrophosphatase (... 390 e-109
Os01g0866500 Similar to Soluble inorganic pyrophosphatase (... 372 e-103
Os10g0406100 Similar to PRLI-interacting factor F (Fragment) 365 e-101
Os05g0114000 Similar to PRLI-interacting factor F (Fragment) 357 3e-99
Os02g0704900 Similar to Inorganic pyrophosphatase-like protein 351 2e-97
Os01g0322300 Inorganic pyrophosphatase family protein 110 8e-25
Os02g0768600 Similar to Chloroplast inorganic pyrophosphata... 80 2e-15
Os01g0974700 Inorganic pyrophosphatase family protein 77 1e-14
>Os04g0687100 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 213
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MSEEDTNAAAGQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGS 60
MSEEDTNAAAGQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGS
Sbjct: 1 MSEEDTNAAAGQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGS 60
Query: 61 KVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLR 120
KVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLR
Sbjct: 61 KVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLR 120
Query: 121 ARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKE 180
ARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKE
Sbjct: 121 ARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKE 180
Query: 181 VAVDAFLPANTARDAIQYSMDLYAQYILQSLRQ 213
VAVDAFLPANTARDAIQYSMDLYAQYILQSLRQ
Sbjct: 181 VAVDAFLPANTARDAIQYSMDLYAQYILQSLRQ 213
>Os05g0438500 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 224
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/201 (92%), Positives = 196/201 (97%)
Query: 13 PRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGSKVKYELDKKTGL 72
PR PKLNERILSSLSRRSVAAHPWHDLEIGP APAVFNVVVEITKGSKVKYELDKKTGL
Sbjct: 24 PRPGPKLNERILSSLSRRSVAAHPWHDLEIGPDAPAVFNVVVEITKGSKVKYELDKKTGL 83
Query: 73 IKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQ 132
IKVDR+LYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPV+PGSFLRARAIGLMPMIDQ
Sbjct: 84 IKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVLPGSFLRARAIGLMPMIDQ 143
Query: 133 GEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEVAVDAFLPANTA 192
GEKDDKIIAVCADDPEYRH+N++SELSPHRLQEI+RFFEDYKKNENKEVAV+ FLPA TA
Sbjct: 144 GEKDDKIIAVCADDPEYRHFNNLSELSPHRLQEIRRFFEDYKKNENKEVAVNDFLPAPTA 203
Query: 193 RDAIQYSMDLYAQYILQSLRQ 213
R+AIQYSMDLYAQYILQSL++
Sbjct: 204 REAIQYSMDLYAQYILQSLKR 224
>Os01g0866500 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 212
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/207 (86%), Positives = 186/207 (89%)
Query: 1 MSEEDTNAAAGQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGS 60
MSE D A R AP+LNERILSSLSRRSVAAHPWHDL+ G APAVFNVVVEI+KGS
Sbjct: 1 MSEADGGEGAKPKRPAPRLNERILSSLSRRSVAAHPWHDLDTGADAPAVFNVVVEISKGS 60
Query: 61 KVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLR 120
KVKYELDKKTG I VDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPG FLR
Sbjct: 61 KVKYELDKKTGFIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGCFLR 120
Query: 121 ARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKE 180
ARAIGLMPMIDQGEKDDKIIAVC DDPEYRHYND+SELSPHR+QEI+RFFEDYKKNENKE
Sbjct: 121 ARAIGLMPMIDQGEKDDKIIAVCVDDPEYRHYNDLSELSPHRVQEIRRFFEDYKKNENKE 180
Query: 181 VAVDAFLPANTARDAIQYSMDLYAQYI 207
VAV+ LP ARDAIQYSMDLYAQYI
Sbjct: 181 VAVNEVLPVTAARDAIQYSMDLYAQYI 207
>Os10g0406100 Similar to PRLI-interacting factor F (Fragment)
Length = 204
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/203 (84%), Positives = 188/203 (92%)
Query: 11 GQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGSKVKYELDKKT 70
+ ++ P LNERILSSLS+RSVAAH WHDLEIGPGAP VFNVVVEITKGSKVKYELDKKT
Sbjct: 2 AEEKKTPCLNERILSSLSKRSVAAHSWHDLEIGPGAPQVFNVVVEITKGSKVKYELDKKT 61
Query: 71 GLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLRARAIGLMPMI 130
G+IKVDRVLYSSVVYPHNYGFIPRTLCED DPMDVLVLMQEPVIPG +LRA+AIGLMPMI
Sbjct: 62 GMIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEPVIPGCYLRAKAIGLMPMI 121
Query: 131 DQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEVAVDAFLPAN 190
DQGEKDDKIIAVC DDPE+RH+ND+ ELSPHRL EI+RFFEDYKKNENKEVAV+ FLP
Sbjct: 122 DQGEKDDKIIAVCVDDPEFRHFNDLKELSPHRLAEIRRFFEDYKKNENKEVAVNDFLPPA 181
Query: 191 TARDAIQYSMDLYAQYILQSLRQ 213
TA++AI+YSMDLYA+YIL SLR+
Sbjct: 182 TAQEAIKYSMDLYAEYILHSLRR 204
>Os05g0114000 Similar to PRLI-interacting factor F (Fragment)
Length = 216
Score = 357 bits (916), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 168/211 (79%), Positives = 190/211 (90%), Gaps = 3/211 (1%)
Query: 3 EEDTNAAAGQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGSKV 62
E+ T +A P +AP LNERILSS+SRRS+AAHPWHDLEIGPGAP +FN V+EI +GSKV
Sbjct: 9 EKKTGSA---PVKAPALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIPRGSKV 65
Query: 63 KYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLRAR 122
KYELDKKTGLI VDRVLYSSVVYPHNYGFIPRTLCED+DP+DVLV+MQEPVIPG FLRA+
Sbjct: 66 KYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGCFLRAK 125
Query: 123 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEVA 182
AIGLMPMIDQGE DDKIIAVCADDPEY+HYNDI EL PHRL EI+RFFEDYKKNENKEVA
Sbjct: 126 AIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKEVA 185
Query: 183 VDAFLPANTARDAIQYSMDLYAQYILQSLRQ 213
V+ FLPA+ A +AI++SMDLYA YI++ LR+
Sbjct: 186 VNDFLPASAAYEAIKHSMDLYATYIVEGLRR 216
>Os02g0704900 Similar to Inorganic pyrophosphatase-like protein
Length = 214
Score = 351 bits (901), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 169/212 (79%), Positives = 183/212 (86%)
Query: 2 SEEDTNAAAGQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGSK 61
E D A G LNERILSS+S++ VAAHPWHDLEIGPGAPAVFN VVEI +GSK
Sbjct: 3 GEADGKAPLGSRYPPAALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGSK 62
Query: 62 VKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLRA 121
VKYELDK TGLIKVDRVLYSSVVYPHNYGFIPRTLCED DPMDVLVLMQE V+PG FLRA
Sbjct: 63 VKYELDKATGLIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLRA 122
Query: 122 RAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEV 181
RAIGLMPMIDQGEKDDKIIAVCADDPEYRH+ DI E+ PHRLQEI+RFFEDYKKNENKEV
Sbjct: 123 RAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDYKKNENKEV 182
Query: 182 AVDAFLPANTARDAIQYSMDLYAQYILQSLRQ 213
AV+ FLPA A +AI+YSMDLY YI++SLR+
Sbjct: 183 AVNEFLPAEDAINAIKYSMDLYGAYIIESLRK 214
>Os01g0322300 Inorganic pyrophosphatase family protein
Length = 65
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 56/63 (88%)
Query: 142 VCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEVAVDAFLPANTARDAIQYSMD 201
VCADDPE+ HYNDI+ELSPH LQEI+R FEDYKKNE K+V DAFLP NTARDAIQYS+D
Sbjct: 3 VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
Query: 202 LYA 204
LYA
Sbjct: 63 LYA 65
>Os02g0768600 Similar to Chloroplast inorganic pyrophosphatase (EC 3.6.1.1)
Length = 294
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 23/166 (13%)
Query: 36 PWHDLEIGPGAPAVFNVVVEITKGSKVKYEL--DKKTGLIKVDRVLYSSVVYPHN----Y 89
PWHD+ + G VF+ VVEI K S K E+ D+ IK D + YP+N Y
Sbjct: 86 PWHDVPLRAGD-GVFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRYYPYNINWNY 144
Query: 90 GFIPRTLCE-------------DNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQGEKD 136
G P+T + DNDP+DV+ + + G L+ + + + MID+GE D
Sbjct: 145 GLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELD 204
Query: 137 DKIIAVCADDPEYRHYNDISELSPH---RLQEIKRFFEDYKKNENK 179
KI+A+ DDP+ ND+ ++ H L I+ +F DYK + K
Sbjct: 205 WKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGK 250
>Os01g0974700 Inorganic pyrophosphatase family protein
Length = 79
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 38/40 (95%)
Query: 74 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPV 113
+VDRVLYSSVVYPHNYGFIPRTLC+D+DP+DVLV+MQ +
Sbjct: 26 QVDRVLYSSVVYPHNYGFIPRTLCDDSDPLDVLVIMQVCI 65
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,221,874
Number of extensions: 303360
Number of successful extensions: 678
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 677
Number of HSP's successfully gapped: 9
Length of query: 213
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 116
Effective length of database: 11,971,043
Effective search space: 1388640988
Effective search space used: 1388640988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)