BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0624600 Os04g0624600|AK122098
(1216 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0624600 Similar to Starch synthase DULL1 (Fragment) 2293 0.0
Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthas... 366 e-101
Os05g0533600 Similar to Starch synthase IVa (Glycogen (Star... 363 e-100
Os06g0160700 Similar to Starch synthase I, chloroplast prec... 199 1e-50
Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (E... 189 1e-47
Os10g0437600 Similar to Starch synthase II, chloroplast pre... 185 2e-46
Os06g0229800 Similar to Starch synthase IIA 176 1e-43
Os06g0133000 Granule-bound starch synthase I, chloroplast p... 167 4e-41
AK072339 153 8e-37
Os07g0412100 Similar to Granule-bound starch synthase Ib, c... 148 2e-35
Os02g0807100 Similar to Wall-associated kinase-like protein 122 1e-27
>Os04g0624600 Similar to Starch synthase DULL1 (Fragment)
Length = 1216
Score = 2293 bits (5942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1110/1216 (91%), Positives = 1110/1216 (91%)
Query: 1 MEMAHSPLCSRSRPVLVVRPATAATGFAQPIIXXXXXXXXXXXXXXVASADYSKRNPRRA 60
MEMAHSPLCSRSRPVLVVRPATAATGFAQPII VASADYSKRNPRRA
Sbjct: 1 MEMAHSPLCSRSRPVLVVRPATAATGFAQPIIRCRRFTRTRLLRCLVASADYSKRNPRRA 60
Query: 61 STPKPKGAASRTYAPRPTVESSMKKIGQSGTDEGDLGTSNGKLSSEATEQTSNVEESSEV 120
STPKPKGAASRTYAPRPTVESSMKKIGQSGTDEGDLGTSNGKLSSEATEQTSNVEESSEV
Sbjct: 61 STPKPKGAASRTYAPRPTVESSMKKIGQSGTDEGDLGTSNGKLSSEATEQTSNVEESSEV 120
Query: 121 DFSGNVSSSVFLEGMDDAFXXXXXXXXXQNQSPELSSESMDDDAIDRKLDEYRGKISALI 180
DFSGNVSSSVFLEGMDDAF QNQSPELSSESMDDDAIDRKLDEYRGKISALI
Sbjct: 121 DFSGNVSSSVFLEGMDDAFEAETEEEVEQNQSPELSSESMDDDAIDRKLDEYRGKISALI 180
Query: 181 SSKPEPTSVSSTHVQDRSIVGFHEQEKSVVSFHEQDRSIVSVPEQSQPSSGVSGQNPTEE 240
SSKPEPTSVSSTHVQDRSIVGFHEQEKSVVSFHEQDRSIVSVPEQSQPSSGVSGQNPTEE
Sbjct: 181 SSKPEPTSVSSTHVQDRSIVGFHEQEKSVVSFHEQDRSIVSVPEQSQPSSGVSGQNPTEE 240
Query: 241 KTIISGQDVTEEAPEEITGKSIEREPLSRETEKVLFADDDPRIIKDEQYEPDIAPVQDDV 300
KTIISGQDVTEEAPEEITGKSIEREPLSRETEKVLFADDDPRIIKDEQYEPDIAPVQDDV
Sbjct: 241 KTIISGQDVTEEAPEEITGKSIEREPLSRETEKVLFADDDPRIIKDEQYEPDIAPVQDDV 300
Query: 301 DPQVLRRRLEELAEKNYLAGNKCFVFPEVVQADSVIDLYLNHSMSALASEPDILIKGAFN 360
DPQVLRRRLEELAEKNYLAGNKCFVFPEVVQADSVIDLYLNHSMSALASEPDILIKGAFN
Sbjct: 301 DPQVLRRRLEELAEKNYLAGNKCFVFPEVVQADSVIDLYLNHSMSALASEPDILIKGAFN 360
Query: 361 GWRWKKFTQKMHKSELTGDWWCCKLHIPKQAYRLDFVFFNGDTIYENNNHNDFVLQIESE 420
GWRWKKFTQKMHKSELTGDWWCCKLHIPKQAYRLDFVFFNGDTIYENNNHNDFVLQIESE
Sbjct: 361 GWRWKKFTQKMHKSELTGDWWCCKLHIPKQAYRLDFVFFNGDTIYENNNHNDFVLQIESE 420
Query: 421 INEHSFEDFLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEMNK 480
INEHSFEDFLV VEMNK
Sbjct: 421 INEHSFEDFLVEEKQRELERLAAEEAERKRQAEEERRKEEERAAMEADRAQAKAEVEMNK 480
Query: 481 NKLQNLLNSASRYADNLWYIEPHTYKAGDRVKLFYNRSSRPLMHNTEIWMHGGYNNWSDG 540
NKLQNLLNSASRYADNLWYIEPHTYKAGDRVKLFYNRSSRPLMHNTEIWMHGGYNNWSDG
Sbjct: 481 NKLQNLLNSASRYADNLWYIEPHTYKAGDRVKLFYNRSSRPLMHNTEIWMHGGYNNWSDG 540
Query: 541 LSIAEKLIKSYEKDGDWWYADVTLPEGALVLDWVFADGPPGNARNYDNNGRQDFHAVVPN 600
LSIAEKLIKSYEKDGDWWYADVTLPEGALVLDWVFADGPPGNARNYDNNGRQDFHAVVPN
Sbjct: 541 LSIAEKLIKSYEKDGDWWYADVTLPEGALVLDWVFADGPPGNARNYDNNGRQDFHAVVPN 600
Query: 601 NISEDLFWVEEEHMIFKRLQXXXXXXXXXXXXXXXIXXXXXXXXXXXXXRDFLLSQKHIV 660
NISEDLFWVEEEHMIFKRLQ I RDFLLSQKHIV
Sbjct: 601 NISEDLFWVEEEHMIFKRLQKERKEREDADRRKSEITAKMKAEMKEKTMRDFLLSQKHIV 660
Query: 661 YTEPLEVRAGTTVDVLYNPSNTVLNGKPEVWFRCSFNRWTHPSGPLPPQKMVNAENGSHL 720
YTEPLEVRAGTTVDVLYNPSNTVLNGKPEVWFRCSFNRWTHPSGPLPPQKMVNAENGSHL
Sbjct: 661 YTEPLEVRAGTTVDVLYNPSNTVLNGKPEVWFRCSFNRWTHPSGPLPPQKMVNAENGSHL 720
Query: 721 RATVRVPLDAYMMDFVFSESEEGGIYDNRNGMDYHSPVTDSVAKEPPMHIVHIAVEMAPI 780
RATVRVPLDAYMMDFVFSESEEGGIYDNRNGMDYHSPVTDSVAKEPPMHIVHIAVEMAPI
Sbjct: 721 RATVRVPLDAYMMDFVFSESEEGGIYDNRNGMDYHSPVTDSVAKEPPMHIVHIAVEMAPI 780
Query: 781 AKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYRQSFTWGNTEIKVWFG 840
AKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYRQSFTWGNTEIKVWFG
Sbjct: 781 AKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYRQSFTWGNTEIKVWFG 840
Query: 841 KVEDVPVYFLEPQNGMFWVGCVYGRNDESRFGFFCHSALEFLRQNGSSPDIIHCHDWSSA 900
KVEDVPVYFLEPQNGMFWVGCVYGRNDESRFGFFCHSALEFLRQNGSSPDIIHCHDWSSA
Sbjct: 841 KVEDVPVYFLEPQNGMFWVGCVYGRNDESRFGFFCHSALEFLRQNGSSPDIIHCHDWSSA 900
Query: 901 PVAWLFKEQYAQNGLSNGRVVFTIHNLEFGAHHIGKAMARCDKATTVSYTYSREVSGHGA 960
PVAWLFKEQYAQNGLSNGRVVFTIHNLEFGAHHIGKAMARCDKATTVSYTYSREVSGHGA
Sbjct: 901 PVAWLFKEQYAQNGLSNGRVVFTIHNLEFGAHHIGKAMARCDKATTVSYTYSREVSGHGA 960
Query: 961 IAPHFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQQTDTP 1020
IAPHFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQQTDTP
Sbjct: 961 IAPHFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQQTDTP 1020
Query: 1021 VVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGR 1080
VVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGR
Sbjct: 1021 VVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGR 1080
Query: 1081 VKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYXXXXXX 1140
VKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLY
Sbjct: 1081 VKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYDTVFDV 1140
Query: 1141 XXXXXRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWN 1200
RAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWN
Sbjct: 1141 DDDKDRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWN 1200
Query: 1201 RPALDYMELYHSARKN 1216
RPALDYMELYHSARKN
Sbjct: 1201 RPALDYMELYHSARKN 1216
>Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 972
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/493 (41%), Positives = 279/493 (56%), Gaps = 54/493 (10%)
Query: 768 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYR-- 825
+HIVHIA EMAP+AKVGGL DVV L +A+Q GH VE++LPKYDC+ L + +L
Sbjct: 477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDV 536
Query: 826 --QSFTWGNT-EIKVWFGKVEDVPVYFLEPQ--NGMFWVGCVYGRNDE-SRFGFFCHSAL 879
QS+ GN VW G VE +PVYF+EPQ + FW YG +D+ R+ +F +AL
Sbjct: 537 VIQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAAL 596
Query: 880 EFLRQNGSSPDIIHCHDWSSAPVAWLFKEQYAQNGLSNGRVVFTIHNLEFGAHHIGKAMA 939
E L Q+G DIIHCHDW +A VA L+ + YA G S+ R+ FT HN E+ ++
Sbjct: 597 ELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLS 656
Query: 940 RC--------------DKA-----------------TTVSYTYSREVSGHGA------IA 962
C D A TTVS TY+ EV G +
Sbjct: 657 YCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQDTLK 716
Query: 963 PHFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQQTDT--P 1020
H KF GI NGID W+P +D F+ V Y++ ++ +GK+A K L+++LGL D P
Sbjct: 717 MHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDL-QGKAANKAFLRKQLGLYSEDASQP 775
Query: 1021 VVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGR 1080
+V I+RL QKG+HLI+HAIY+T E GQ VLLGS+P IQ +F +A + + +
Sbjct: 776 LVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQF--QKNNN 833
Query: 1081 VKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYXXXXXX 1140
++L L YDE LSH IYA +D ++PSMFEPCGLTQ+ AMRYGS+PIVR+TGGL
Sbjct: 834 IRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDF 893
Query: 1141 XXXXXRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWN 1200
+ NGF+F D + L+RA + + + L ++ M+ D++W+
Sbjct: 894 DDETIPVELR----NGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWD 949
Query: 1201 RPALDYMELYHSA 1213
PA Y LY SA
Sbjct: 950 SPASQYENLYQSA 962
>Os05g0533600 Similar to Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 915
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/491 (41%), Positives = 278/491 (56%), Gaps = 54/491 (10%)
Query: 768 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYR-- 825
+HI+HIA EMAP+AKVGGL DV++ L +A+Q GH VE+ILPKYDC+ V +L
Sbjct: 422 LHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQVNNLKVLDV 481
Query: 826 --QSFTWGNT-EIKVWFGKVEDVPVYFLEPQN--GMFWVGCVYGRNDE-SRFGFFCHSAL 879
QS+ GN K+W G VE +PVYF+EPQ+ FW YG +D+ RF +F +AL
Sbjct: 482 VVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQYYGEHDDFKRFAYFSRAAL 541
Query: 880 EFLRQNGSSPDIIHCHDWSSAPVAWLFKEQYAQNGLSNGRVVFTIHNLEFGAHHIGKAMA 939
E L Q+ DIIHCHDW +A VA L+ E YA G ++ R+ FT HN E+ + +A
Sbjct: 542 ELLYQSQKKIDIIHCHDWQTAFVAPLYWEAYANLGFNSARICFTCHNFEYQGAAPAQDLA 601
Query: 940 RC-------------------------------DKATTVSYTYSREVSGHG------AIA 962
C + TTVS TY+ EV G ++
Sbjct: 602 CCGLDVQQLDREDRMRDNSHGRINVVKGAIVYSNIVTTVSPTYALEVRSEGGRGLQDSLK 661
Query: 963 PHFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQQTDT--P 1020
H KF GI NGID D W+P +D + V Y + N ++GK+A K AL+++L L T+ P
Sbjct: 662 LHSRKFVGILNGIDTDTWNPSTDRHLKVQYNA-NDLQGKAANKAALRKQLNLSSTNASQP 720
Query: 1021 VVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGR 1080
+VG I+RL QKG+HLI+HAIY+T E GQ VLLGS+P IQ +F +A H + +
Sbjct: 721 LVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIAD--HFQNNNN 778
Query: 1081 VKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYXXXXXX 1140
++L L YD+ LSH IYA +D +VPSMFEPCGLTQ+ AMRYGS+PIVRKTGGL
Sbjct: 779 IRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDF 838
Query: 1141 XXXXXRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWN 1200
+ NGF+F D + A++RA + + + L ++ M D++W
Sbjct: 839 DDETIPKELR----NGFTFVHPDEKALSGAMERAFNYYNRKPEVWKQLVQKDMRIDFSWA 894
Query: 1201 RPALDYMELYH 1211
A Y ++Y
Sbjct: 895 SSASQYEDIYQ 905
>Os06g0160700 Similar to Starch synthase I, chloroplast precursor (EC 2.4.1.21)
(Soluble starch synthase 1) (SSS 1)
Length = 641
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 246/515 (47%), Gaps = 87/515 (16%)
Query: 770 IVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYRQSFT 829
+V + E +P AK GGLGDV SL A+ GH V V++P+Y ++ + ++ +F
Sbjct: 135 VVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRY----MNGALNKNFANAF- 189
Query: 830 WGNTEIKV-WFGKVEDVPVYFLEPQNGMFWV----------GCVYGRN------DESRFG 872
+ IK+ FG +V +F E ++ + WV G +YG N ++ R+
Sbjct: 190 YTEKHIKIPCFGGEHEV-TFFHEYRDSVDWVFVDHPSYHRPGNLYGDNFGAFGDNQFRYT 248
Query: 873 FFCHSALE---FLRQNG---SSPDIIHCHDWSSAPVAWLFKEQYAQNGL-SNGRVVFTIH 925
C++A E L G + +DW ++ V L +Y G+ + R V IH
Sbjct: 249 LLCYAACEAPLILELGGYIYGQKCMFVVNDWHASLVPVLLAAKYRPYGVYRDARSVLVIH 308
Query: 926 NLE-------------------FGA-----------HHIGK---------AMARCDKATT 946
NL +GA H + K A+ D+ T
Sbjct: 309 NLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVT 368
Query: 947 VSYTYSREVS----GHGA---IAPHFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVE 999
VS YS EV+ G G ++ S +GI NGID + W+P +D F+P HY+ +++
Sbjct: 369 VSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDL-S 427
Query: 1000 GKSAAKKALQQRLGLQ-QTDTPVVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAP 1058
GK+ K LQ+ LGL + D P++G I RL QKGI LIK AI + N Q V+LGS
Sbjct: 428 GKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSG- 486
Query: 1059 DHRIQGDFTNLASKLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTA 1118
D +G + S ++ G V + P+SH I AG D +L+PS FEPCGL QL A
Sbjct: 487 DPGFEGWMRSTESGYRDKFRGWVGFSV----PVSHRITAGCDILLMPSRFEPCGLNQLYA 542
Query: 1119 MRYGSIPIVRKTGGLYXXXXXXXXXXXRAREQGLEPNGFSFEGADSNGVDYALDRAITTW 1178
M+YG++P+V TGGL E+G + G++F + +AL AI+T+
Sbjct: 543 MQYGTVPVVHGTGGLRDTVENFNPFA----EKGEQGTGWAFSPLTIEKMLWALRMAISTY 598
Query: 1179 YDARDWFHSLCKRVMEQDWTWNRPALDYMELYHSA 1213
+ + + L KR M D+TW+ A Y +++ A
Sbjct: 599 REHKSSWEGLMKRGMSSDFTWDHAASQYEQIFEWA 633
>Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (EC 2.4.1.21)
Length = 677
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 235/503 (46%), Gaps = 70/503 (13%)
Query: 768 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYRQS 827
M+++ +A E +P K GGLGDVV +L +A+ GH V V++P+Y + KDL R+
Sbjct: 186 MNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYG--EYAEAKDLGVRKR 243
Query: 828 FTWG--NTEIKVWFGKVEDVPVYFLEPQNGMFWVGCVYG--RNDE-SRFGFFCHSALE-- 880
+ ++E+ + ++ V FLE +YG R D R FC +A+E
Sbjct: 244 YRVAGQDSEVSYFHAFIDGVDFVFLEAPPFRHRHNDIYGGERFDVLKRMILFCKAAVEVP 303
Query: 881 -FLRQNGS----SPDIIHCHDWSSAPVAWLFKEQYAQNGLSN-GRVVFTIHNLE------ 928
F GS + +DW +A + K Y NGL R V IHN+
Sbjct: 304 WFAPCGGSIYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLVIHNIAHQGRGP 363
Query: 929 ----------------------FGAHH---IGKAMARCDKATTVSYTYSREVSG------ 957
G H + D+A TVS+ Y E+
Sbjct: 364 VDDFATMDLPEHYIDHFRLYDPVGGEHSNVFAAGLKMADRAVTVSHGYLWEIKTMDGGWG 423
Query: 958 -HGAIAPHFSKFHGIRNGIDPDIWDPYSDNFIP----VHYTSENVVEGKSAAKKALQQRL 1012
H I + K GI NGID W+P D + +YT E + GK K+ALQ++L
Sbjct: 424 LHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQL 483
Query: 1013 GLQ-QTDTPVVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLAS 1071
GLQ + D P++G I RL QKG+ +I A+ ++ QVV+LG+ + D +
Sbjct: 484 GLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTG-----RPDLEEMLR 538
Query: 1072 KLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTG 1131
+ E++ +V+ + + L+H I AGAD +L+PS FEPCGL QL AM YG++P+V G
Sbjct: 539 RFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVG 598
Query: 1132 GLYXXXXXXXXXXXRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKR 1191
GL + GL G++F+ A++N + AL + T+ + ++ + L R
Sbjct: 599 GLRDTVAPFDPFA----DTGL---GWTFDRAEANRMIDALGHCLNTYRNYKESWRGLQAR 651
Query: 1192 VMEQDWTWNRPALDYMELYHSAR 1214
M QD +W+ A Y ++ A+
Sbjct: 652 GMAQDLSWDHAAELYEDVLVKAK 674
>Os10g0437600 Similar to Starch synthase II, chloroplast precursor (EC 2.4.1.21)
(SS II) (GBSSII) (Granule-bound starch synthase II)
Length = 749
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 229/503 (45%), Gaps = 70/503 (13%)
Query: 768 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLH--YR 825
++I+ +A E AP +K GGLGDV +L +A+ GH V V++P Y N + + L R
Sbjct: 258 INIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYK--NYAEPQQLGEPRR 315
Query: 826 QSFTWGNTEIKVWFGKVEDVPVYFLEPQNGMFWVGCVYG--RND-ESRFGFFCHSALEF- 881
+ E+ + ++ V F++ +YG R D R C +A+E
Sbjct: 316 YQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAAIEVP 375
Query: 882 ------LRQNGSSPDIIHCHDWSSAPVAWLFKEQYAQNG-LSNGRVVFTIHNLE------ 928
G + +DW +A + K Y NG + R V IHN+
Sbjct: 376 WYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGP 435
Query: 929 ----------------------FGAHHI---GKAMARCDKATTVSYTYSREVSG------ 957
FG H+ + D+ TVS+ Y+ E+
Sbjct: 436 LDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWG 495
Query: 958 -HGAIAPHFSKFHGIRNGIDPDIWDPYSDNFIP----VHYTSENVVEGKSAAKKALQQRL 1012
HG I KF GI NGID W+P D + +Y+ E V GK K ALQ+ L
Sbjct: 496 LHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKEL 555
Query: 1013 GLQ-QTDTPVVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLAS 1071
GL + D PV+ I RL QKG+ LI A+ ++ Q+++LG+ + D +
Sbjct: 556 GLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTG-----RQDLEDTLR 610
Query: 1072 KLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTG 1131
+L +++ RV+ + + L+H + AGAD +L+PS FEPCGL QL AM YG++P+V G
Sbjct: 611 RLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVG 670
Query: 1132 GLYXXXXXXXXXXXRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKR 1191
GL E GL G++FE A++N + AL + T+ + R + L KR
Sbjct: 671 GLRDTVEHYNPY----EESGL---GWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKR 723
Query: 1192 VMEQDWTWNRPALDYMELYHSAR 1214
M QD +W+ A Y E+ +A+
Sbjct: 724 GMMQDLSWDNAAKLYEEVLLAAK 746
>Os06g0229800 Similar to Starch synthase IIA
Length = 810
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 232/509 (45%), Gaps = 70/509 (13%)
Query: 762 VAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKD 821
+A E M+++ +A E +P K GGLGDV +L +A+ GH V V++P+Y + + +D
Sbjct: 313 LAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYG--DYAEAQD 370
Query: 822 LHYRQSFTWG--NTEIKVWFGKVEDVPVYFLEPQNGMFWVGCVYGRNDE---SRFGFFCH 876
+ R+ + + E+K + ++ V F++ +YG N + R FC
Sbjct: 371 VGIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILFCK 430
Query: 877 SALEFLRQ-------NGSSPDIIHCHDWSSAPVAWLFKEQYAQNGLSN-GRVVFTIHNLE 928
+A+E G + +DW +A + K Y NG+ R V IHN+
Sbjct: 431 AAVEVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIA 490
Query: 929 F----------------------------GAHH---IGKAMARCDKATTVSYTYSREVSG 957
+ G H G + D+ TVS Y E+
Sbjct: 491 YQGRGPVDEFPYMELPEHYLDHFKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKT 550
Query: 958 -------HGAIAPHFSKFHGIRNGIDPDIWDPYSDNFIP----VHYTSENVVEGKSAAKK 1006
H I + K +GI NGID W+P D + +YT ++ K K
Sbjct: 551 TEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKA 610
Query: 1007 ALQQRLGLQ-QTDTPVVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGD 1065
ALQ+ LGL+ + D P++G I RL QKG+ +I A+ ++ Q+VLLGS + D
Sbjct: 611 ALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSG-----RRD 665
Query: 1066 FTNLASKLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIP 1125
+ + +++ +V+ + + ++H I AGAD +++PS FEPCGL QL AM YG++P
Sbjct: 666 LEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVP 725
Query: 1126 IVRKTGGLYXXXXXXXXXXXRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWF 1185
+V GGL + GL G++F+ A+ + + AL + T+ ++ +
Sbjct: 726 VVHAVGGLRDTMSAFDPF----EDTGL---GWTFDRAEPHKLIEALGHCLETYRKYKESW 778
Query: 1186 HSLCKRVMEQDWTWNRPALDYMELYHSAR 1214
L R M QD +W+ A Y E+ A+
Sbjct: 779 RGLQVRGMSQDLSWDHAAELYEEVLVKAK 807
>Os06g0133000 Granule-bound starch synthase I, chloroplast precursor (EC 2.4.1.21)
Length = 609
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 213/523 (40%), Gaps = 112/523 (21%)
Query: 768 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYD---------CLNLSN 818
M++V + EMAP +K GGLGDV+ L A+ GH V VI P+YD +
Sbjct: 83 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIK 142
Query: 819 VKDLHYRQSF---------------------TWGNTEIKVWFGKVEDVPVYFLEPQNGMF 857
V D + R F WG T K++ P G+
Sbjct: 143 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIY------------GPDTGVD 190
Query: 858 WVGCVYGRNDESRFGFFCHSALEFLR----------QNGSSPDIIH-CHDWSSAPVAWLF 906
+ ++++ RF C +ALE R + D++ C+DW + P+A
Sbjct: 191 Y------KDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYL 244
Query: 907 KEQYAQNGL-SNGRVVFTIHNLEFGAHH-------------------------------- 933
K Y NG+ N +V F IHN+ +
Sbjct: 245 KNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 304
Query: 934 ---IGKAMARCDKATTVSYTYSRE-VSGHGAIAP-----HFSKFHGIRNGIDPDIWDPYS 984
+ + D+ TVS Y+ E +SG + GI NG+D WDP
Sbjct: 305 INWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSK 364
Query: 985 DNFIPVHYTSENVVEGKSAAKKALQQRLGLQ-QTDTPVVGIISRLTVQKGIHLIKHAIYR 1043
D +I Y + +E K+ K+ALQ GL P++ I RL QKG ++ AI
Sbjct: 365 DKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPE 424
Query: 1044 TLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGRVKLCLTYDEPLSHLIYAGADFIL 1103
++ + Q+VLLG+ + F L + +Y G+V+ + ++ PL+HLI AGAD +
Sbjct: 425 LMQEDVQIVLLGTG-----KKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLA 479
Query: 1104 VPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYXXXXXXXXXXXRAREQGLEPNGFSFEGAD 1163
VPS FEPCGL QL MRYG+ TGGL R L + E +D
Sbjct: 480 VPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGR---LSVDCKVVEPSD 536
Query: 1164 SNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWNRPALDY 1206
V L RAI + + + M QD +W PA ++
Sbjct: 537 VKKVAATLKRAIKVV--GTPAYEEMVRNCMNQDLSWKGPAKNW 577
>AK072339
Length = 376
Score = 153 bits (387), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 173/373 (46%), Gaps = 56/373 (15%)
Query: 886 GSSPDIIHCHDWSSAPVAWLFKEQYAQNG-LSNGRVVFTIHNLE---------------- 928
G + +DW +A + K Y NG + R V IHN+
Sbjct: 13 GDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLP 72
Query: 929 ------------FGAHHI---GKAMARCDKATTVSYTYSREVSG-------HGAIAPHFS 966
FG H+ + D+ TVS+ Y+ E+ HG I
Sbjct: 73 VDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWGLHGIINESDW 132
Query: 967 KFHGIRNGIDPDIWDPYSDNFIP----VHYTSENVVEGKSAAKKALQQRLGLQ-QTDTPV 1021
KF GI NGID W+P D + +Y+ E V GK K ALQ+ LGL + D PV
Sbjct: 133 KFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPV 192
Query: 1022 VGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGRV 1081
+ I RL QKG+ LI A+ ++ Q+++LG+ + D + +L +++ RV
Sbjct: 193 IAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTG-----RQDLEDTLRRLESQHYDRV 247
Query: 1082 KLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYXXXXXXX 1141
+ + + L+H + AGAD +L+PS FEPCGL QL AM YG++P+V GGL
Sbjct: 248 RGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGL----RDTV 303
Query: 1142 XXXXRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWNR 1201
E GL G++FE A++N + AL + T+ + R + L KR M QD +W+
Sbjct: 304 EHYNPYEESGL---GWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDN 360
Query: 1202 PALDYMELYHSAR 1214
A Y E+ +A+
Sbjct: 361 AAKLYEEVLLAAK 373
>Os07g0412100 Similar to Granule-bound starch synthase Ib, chloroplast precursor
(EC 2.4.1.21) (Fragment)
Length = 608
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 221/534 (41%), Gaps = 105/534 (19%)
Query: 755 HSPVTDSVAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYD-- 812
H P+ S M I+ IA E P K GGLGDV+ L A+ +GH V I+P+YD
Sbjct: 72 HMPIVCSAG----MTIIFIATECHPWCKTGGLGDVLGGLPPALAAMGHRVMTIVPRYDQY 127
Query: 813 -------CLNLSNVKD----LHYRQSFTWGNTEIKVWFGKVEDVPVYFLEP---QNGMFW 858
L N+ D + + + G + V D P+ FLE + G
Sbjct: 128 KDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFV------DHPM-FLEKVWGKTGPKL 180
Query: 859 VGCVYG---RNDESRFGFFCHSALEFLR-------QNGSSP----DIIHCHDWSSAPVAW 904
G G R+++ RF C +ALE R + S P + +DW + +
Sbjct: 181 YGPTTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPC 240
Query: 905 LFKEQYAQNGL-SNGRVVFTIHNLEFGAH------------------------HIGKAMA 939
K Y G+ N +V F IHN+ + H +
Sbjct: 241 YLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVG 300
Query: 940 R-----------CDKATTVSYTYSREVSGHGAIAPHFSKF-------HGIRNGIDPDIWD 981
R CD TVS Y +E++ GI NG+D W+
Sbjct: 301 RKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWN 360
Query: 982 PYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQ-QTDTPVVGIISRLTVQKGIHLIKHA 1040
P +D +I V Y + V E ++ K+ LQ +GL + P++ + RL QKG ++ A
Sbjct: 361 PATDQYISVKYDATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAA 420
Query: 1041 IYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGRVKLCLTYDEPLSHLIYAGAD 1100
I +E N Q+++LG+ +++ + L K G K ++ PL+H+++AGAD
Sbjct: 421 IPEFVEGNVQIIVLGTG-KKKMEEELILLEVKYPNNARGIAK----FNVPLAHMMFAGAD 475
Query: 1101 FILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYXXXXXXXXXXXRAREQGLEPNGFSFE 1160
FI+VPS FEPCGL QL MRYG +PI TGGL + G F+ E
Sbjct: 476 FIIVPSRFEPCGLIQLQGMRYGVVPICSSTGGL--------VDTVKEGVTGFHMGLFNVE 527
Query: 1161 G-----ADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWNRPALDYMEL 1209
D V + RA+ + F + + M QD +W PA + E+
Sbjct: 528 CETVDPVDVTAVASTVKRALKQYNTPA--FQEMVQNCMAQDLSWKGPAKKWEEV 579
>Os02g0807100 Similar to Wall-associated kinase-like protein
Length = 403
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 866 NDESRFGFFCHSALEFLRQNGSSPDIIHCHDWSSAPVAWLFKEQYAQNGLSNGRVVFTIH 925
+D RF +F ++L+++ ++G PD++H H+W +A V LF + +A GL N R++ T
Sbjct: 30 DDFERFSYFSRASLDYIVKSGKQPDVLHVHNWETAIVGPLFWDIFAHQGLGNTRILLTCQ 89
Query: 926 NLEFGAHHIGKAMARC--------------------------------DKATTVSYTYSR 953
+L + + C +K +S T R
Sbjct: 90 DLTSQCLEVPNMLELCGLDPHKLHRPDRLQDNSETNLVNVLKGGIVYSNKVLLMSSTLPR 149
Query: 954 EVS----GHG---AIAPHFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVEGKSAAKK 1006
+++ GHG + H K +G+D ++WDP D ++P Y S N +EGKS +K
Sbjct: 150 DMAIQGLGHGLEATLTTHKEKVLVASHGLDGELWDPSKDIYLPQRY-SPNDIEGKSFCRK 208
Query: 1007 ALQQRLGLQQTDTPVVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLL---GSAPDHRIQ 1063
L++ +GL + VVG I ++ A+ L QV+ + G + +Q
Sbjct: 209 TLKRCVGLHSGSSVVVGCIC--NGDSNTDGLREAVRVALHGGAQVIFMENKGPVMNSTVQ 266
Query: 1064 GDFTNLASKLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGS 1123
L +L G+ RV YDE L HLI+AG+D L S ++P + A++YGS
Sbjct: 267 A----LKEELKGD---RVMFVEIYDEALEHLIFAGSDIFLCSSFYDPSLQIAIRAIKYGS 319
Query: 1124 IPI 1126
P+
Sbjct: 320 APV 322
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 40,365,925
Number of extensions: 1738344
Number of successful extensions: 4636
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 4591
Number of HSP's successfully gapped: 14
Length of query: 1216
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1104
Effective length of database: 11,187,833
Effective search space: 12351367632
Effective search space used: 12351367632
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 162 (67.0 bits)