BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0605300 Os04g0605300|AK066546
(352 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0605300 Leucine-rich repeat, typical subtype containin... 658 0.0
Os02g0593600 Leucine-rich repeat, typical subtype containin... 171 6e-43
Os04g0476700 Leucine-rich repeat, typical subtype containin... 162 5e-40
AK065422 153 2e-37
Os10g0572300 Leucine-rich repeat, typical subtype containin... 149 4e-36
Os02g0826600 Leucine-rich repeat, typical subtype containin... 84 2e-16
Os08g0511700 Leucine-rich repeat, typical subtype containin... 82 7e-16
Os10g0456200 Ubiquitin domain containing protein 78 1e-14
Os06g0585950 65 6e-11
Os04g0222300 65 8e-11
Os11g0692300 Similar to Bacterial blight resistance protein 65 9e-11
Os11g0640300 Disease resistance protein family protein 65 1e-10
>Os04g0605300 Leucine-rich repeat, typical subtype containing protein
Length = 352
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/352 (93%), Positives = 329/352 (93%)
Query: 1 MREMGEKRRRGHLNPAGFAGGLXXXXXXXXXXXXLDMSGMSMDALPHLTMSLGQVTILDL 60
MREMGEKRRRGHLNPAGFAGGL LDMSGMSMDALPHLTMSLGQVTILDL
Sbjct: 1 MREMGEKRRRGHLNPAGFAGGLHDHEEKKNEEHKLDMSGMSMDALPHLTMSLGQVTILDL 60
Query: 61 SNNNLESIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLESLPNTIE 120
SNNNLESIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLESLPNTIE
Sbjct: 61 SNNNLESIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLESLPNTIE 120
Query: 121 ECRALEELHANFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLN 180
ECRALEELHANFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLN
Sbjct: 121 ECRALEELHANFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLN 180
Query: 181 CLRALPDGXXXXXXXXXXXVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCL 240
CLRALPDG VSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCL
Sbjct: 181 CLRALPDGLENLANLEALNVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCL 240
Query: 241 TKLARFSAVGNPLVSPPMDVVEQGLDAMRAYLTARMNGGDGKRKKKAWLPKLVKYSTFTA 300
TKLARFSAVGNPLVSPPMDVVEQGLDAMRAYLTARMNGGDGKRKKKAWLPKLVKYSTFTA
Sbjct: 241 TKLARFSAVGNPLVSPPMDVVEQGLDAMRAYLTARMNGGDGKRKKKAWLPKLVKYSTFTA 300
Query: 301 RMTPGRTRVHENTEGLLMSDYRSLNGIASPRFLTMLSPRRLFSPRRNSPKHC 352
RMTPGRTRVHENTEGLLMSDYRSLNGIASPRFLTMLSPRRLFSPRRNSPKHC
Sbjct: 301 RMTPGRTRVHENTEGLLMSDYRSLNGIASPRFLTMLSPRRLFSPRRNSPKHC 352
>Os02g0593600 Leucine-rich repeat, typical subtype containing protein
Length = 501
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 147/246 (59%), Gaps = 4/246 (1%)
Query: 45 LPHLTMSLGQVT---ILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSK 101
L HL LG++ +LD+S N L+++P++I L ++ L + SN L SLP+SIG L+
Sbjct: 203 LRHLPEQLGRIRGLLVLDVSRNQLKNVPDAI-GGLEHLEELRLASNALVSLPDSIGLLTS 261
Query: 102 LKVLNVSGNLLESLPNTIEECRALEELHANFNELTKLPDTLGFELHSLRKLSVNSNKLAQ 161
LK+L+VSGN L SLP++I +CR+L EL ++N L+ LP +G E+ L KL V+ NKL
Sbjct: 262 LKILDVSGNKLRSLPDSISKCRSLVELDVSYNVLSYLPTGIGQEMARLEKLWVHLNKLRS 321
Query: 162 LPSSTSHMTALRALDARLNCLRALPDGXXXXXXXXXXXVSQNFQFLRELPYAVGLLASLR 221
LPSS M +LR LDA N LR LP G +S NF +R+LP + G L LR
Sbjct: 322 LPSSVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMRDLPASFGDLLGLR 381
Query: 222 ELDVSYNSIAALPDSMGCLTKLARFSAVGNPLVSPPMDVVEQGLDAMRAYLTARMNGGDG 281
ELD+S N I ALPD G L +L R NPL PP +VV G+ A++ Y+ R
Sbjct: 382 ELDLSNNQIHALPDCFGRLQRLERLRLDQNPLAVPPKEVVAGGVGAVKEYMARRWRDARA 441
Query: 282 KRKKKA 287
+ +++
Sbjct: 442 EEERRG 447
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 8/154 (5%)
Query: 40 MSMDALPHLTMSLGQVT---ILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSLPNSI 96
++ +AL L S+G +T ILD+S N L S+P+S I++ ++V LDV N L LP I
Sbjct: 244 LASNALVSLPDSIGLLTSLKILDVSGNKLRSLPDS-ISKCRSLVELDVSYNVLSYLPTGI 302
Query: 97 GC-LSKLKVLNVSGNLLESLPNTIEECRALEELHANFNELTKLPDTLGFELHSLRKLSVN 155
G +++L+ L V N L SLP+++ E R+L L A+FN+L LP +G L +L L+++
Sbjct: 303 GQEMARLEKLWVHLNKLRSLPSSVCEMRSLRLLDAHFNQLRGLPAGIG-RLAALESLNLS 361
Query: 156 SN--KLAQLPSSTSHMTALRALDARLNCLRALPD 187
SN + LP+S + LR LD N + ALPD
Sbjct: 362 SNFSDMRDLPASFGDLLGLRELDLSNNQIHALPD 395
>Os04g0476700 Leucine-rich repeat, typical subtype containing protein
Length = 271
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
Query: 68 IPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLESLPNTIEECRALEE 127
IP++I L ++ L + SN L SLP+SIG L L++LNV N L SLP++I +CR+L E
Sbjct: 2 IPDAI-GGLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIE 60
Query: 128 LHANFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLNCLRALPD 187
L A++N L LP +G+EL +LRKL V+ NKL LPSS M +L LDA N L LP
Sbjct: 61 LDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPS 120
Query: 188 GXXXXXXXXXXXVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCLTKLARFS 247
+S NF L++LP + G L +LRELD+S N I ALPD+ G L KL + +
Sbjct: 121 AIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLN 180
Query: 248 AVGNPLVSPPMDVVEQGLDAMRAYLTARM 276
NPL PPM++V +G+DA++ Y+ R
Sbjct: 181 LEQNPLSMPPMEIVNKGVDAVKEYMLQRW 209
>AK065422
Length = 470
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 137/258 (53%), Gaps = 5/258 (1%)
Query: 35 LDMSGMSMDALPHLTMSLGQVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSLPN 94
LD+ + LP L + L++ N L S+P SI RLLN+ LDV SN L SLP+
Sbjct: 195 LDIHANRISQLPESIGDLRSLIYLNMRGNQLSSLPSSI-GRLLNLEELDVGSNGLSSLPD 253
Query: 95 SIGCLSKLKVLNVSGNLLESLPNTIEECRALEELHANFNELTKLPDTLGFELHSLRKLSV 154
SIG L++LK L V N L+ LP TI C +L EL A +N L LP+ +G +L L LSV
Sbjct: 254 SIGSLTRLKKLIVETNDLDELPYTIGHCVSLVELQAGYNHLKALPEAVG-KLEPLEILSV 312
Query: 155 NSNKLAQLPSSTSHMTALRALDARLNCLRALPDGXXXXXXXXXXXVSQNFQFLRELPYAV 214
N L LP++ + +T L+ +D N L ++P+ V NF L+ LP ++
Sbjct: 313 RYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNVGNNFADLQYLPRSI 372
Query: 215 GLLASLRELDVSYNSIAALPDSMGCLTKLARFSAVGNPLVSPPMDVVEQGLDAMRAYL-- 272
G L L ELD+S N I LPDS G L L A NPL PP D+ +G A+ Y+
Sbjct: 373 GNLEMLGELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIALKGAQAVVQYMSD 432
Query: 273 -TARMNGGDGKRKKKAWL 289
+ R + + KK W+
Sbjct: 433 ASKRTTKSEPMKPKKTWV 450
>Os10g0572300 Leucine-rich repeat, typical subtype containing protein
Length = 396
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 147/276 (53%), Gaps = 26/276 (9%)
Query: 35 LDMSGMSMDALPHLTMSLGQVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSLPN 94
LD+S + ALP SL +T LDL +N L ++P++ L N++ LD+ +NQLKSLP+
Sbjct: 98 LDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAF-GELSNLIDLDLHANQLKSLPS 156
Query: 95 SIGCLSKLKVLNVSGNLL-----------------------ESLPNTIEECRALEELHAN 131
S G L+ L L++S N+L E LP TI C +L EL +
Sbjct: 157 SFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVELRLD 216
Query: 132 FNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLNCLRALPDGXXX 191
FN+L LP+ +G +L L L+++ N++ LP++ ++ LR LD N + +P+
Sbjct: 217 FNQLKALPEAIG-KLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICF 275
Query: 192 XXXXXXXXVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCLTKLARFSAVGN 251
+S+NF LR LP ++G L L ELD+S N I LPDS CL++L F A
Sbjct: 276 ATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFRCLSRLRVFHADET 335
Query: 252 PLVSPPMDVVEQGLDAMRAYLTARMNGGDGKRKKKA 287
PL PP +VV+ G A+ Y+ +N G +KK
Sbjct: 336 PLEFPPREVVKLGAQAVVKYMND-LNAARGTNQKKT 370
>Os02g0826600 Leucine-rich repeat, typical subtype containing protein
Length = 586
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 51 SLGQVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGN 110
+L + +L++S+NN+ S+P +I L + LDV SNQ+ + P IG + L ++ S N
Sbjct: 66 NLSSLVVLNISHNNISSLPAAI-GDLPLLKSLDVSSNQINAFPEEIGFATALVKVDCSNN 124
Query: 111 LLESLPNTIEECRALEELHANFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSST-SHM 169
L LP ++ C L EL+A+ N ++ LPD L L +L++ NKL L
Sbjct: 125 CLTDLPVSLARCLELSELNASNNTISVLPDELAG-CSKLFRLNLEGNKLVTLSDKMFMSW 183
Query: 170 TALRALDARLNCLRALPDGXXXXXXXXXXXVSQNF---------------------QFLR 208
T L ++A N L A+PDG + QN L
Sbjct: 184 TMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLT 243
Query: 209 ELPYAVGLLAS----------LRE------------LDVSYNSIAALPDSMGCLTKLARF 246
+P +G+L++ L+E LD+S NS++ LP +G +T L +
Sbjct: 244 SIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLSNNSLSGLPAELGTMTTLRKL 303
Query: 247 SAVGNPLVSPPMDVVEQGLDAMRAYLTARMNGGDG 281
GNP+ + +V A+ YL +R++ +G
Sbjct: 304 LLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEG 338
>Os08g0511700 Leucine-rich repeat, typical subtype containing protein
Length = 140
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 133 NELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLNCLRALPDGXXXX 192
N L LP+ +G +L L LSV N L LP++ + +T L+ +D N L ++P+
Sbjct: 1 NHLKALPEAVG-KLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFA 59
Query: 193 XXXXXXXVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCLTKLARFSAVGNP 252
V NF L+ LP ++G L L ELD+S N I LPDS G L L A NP
Sbjct: 60 TSLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENP 119
Query: 253 LVSPPMDVVEQG 264
L PP D+ +G
Sbjct: 120 LQVPPRDIALKG 131
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 63 NNLESIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLESLPNTIEEC 122
N+L+++PE++ +L + +L VR N L+SLP ++ L+KLK ++VS N LES+P
Sbjct: 1 NHLKALPEAV-GKLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFA 59
Query: 123 RALEELHA--NFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLN 180
+L +L+ NF +L LP ++G L L +L +++N++ LP S ++ LR L A N
Sbjct: 60 TSLIKLNVGNNFADLQYLPRSIG-NLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEEN 118
Query: 181 CLRALP 186
L+ P
Sbjct: 119 PLQVPP 124
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 87 NQLKSLPNSIGCLSKLKVLNVSGNLLESLPNTIEECRALEELHANFNELTKLPDTLGFEL 146
N LK+LP ++G L L++L+V N L SLP T+ L+E+ +FNEL +P+ F
Sbjct: 1 NHLKALPEAVGKLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFA- 59
Query: 147 HSLRKLSVNSN--KLAQLPSSTSHMTALRALDARLNCLRALPDG 188
SL KL+V +N L LP S ++ L LD N +R LPD
Sbjct: 60 TSLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDS 103
>Os10g0456200 Ubiquitin domain containing protein
Length = 378
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 27/176 (15%)
Query: 37 MSGMSMDALPHLTMSLGQ-VTILDLSNNNLESIPESIIA-----RLL------------- 77
+S S+ A+P G + +LD+SNN +E+IP+ I A +L+
Sbjct: 137 LSDSSLKAVPEEVWGCGSSIRVLDVSNNCIEAIPQEIAALRSLQKLILTANDIADGNISW 196
Query: 78 -------NVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLESLPNTIEECRALEELHA 130
+ VL + N+L +LP+S+G ++ L+ L ++ N LE+LP I + LE L A
Sbjct: 197 EGLTCVQTLTVLSLSQNRLVTLPSSLGSITHLRELRIANNRLENLPVEIGLLKHLEILIA 256
Query: 131 NFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLNCLRALP 186
N N +T LP ++G SL ++ ++SN LA+LP + ++ L+AL R N L +LP
Sbjct: 257 NNNRITSLPSSIGG-CESLNEVDLSSNLLAELPEAFGNLQHLKALSVRNNGLTSLP 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 81 VLDVRSNQLKSLPNSI-GCLSKLKVLNVSGNLLESLPNTIEECRALEELHANFNELTKLP 139
++ + + LK++P + GC S ++VL+VS N +E++P I R+L++L N++
Sbjct: 134 IIALSDSSLKAVPEEVWGCGSSIRVLDVSNNCIEAIPQEIAALRSLQKLILTANDIAD-- 191
Query: 140 DTLGFE----LHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLNCLRALPDGXXXXXXX 195
+ +E + +L LS++ N+L LPSS +T LR L N L LP
Sbjct: 192 GNISWEGLTCVQTLTVLSLSQNRLVTLPSSLGSITHLRELRIANNRLENLP--VEIGLLK 249
Query: 196 XXXXVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCLTKLARFSAVGNPLVS 255
+ N + LP ++G SL E+D+S N +A LP++ G L L S N L S
Sbjct: 250 HLEILIANNNRITSLPSSIGGCESLNEVDLSSNLLAELPEAFGNLQHLKALSVRNNGLTS 309
Query: 256 PP 257
P
Sbjct: 310 LP 311
>Os06g0585950
Length = 1111
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 30/239 (12%)
Query: 54 QVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLK-SLPNSIGCLSKLKVLNVSGNLL 112
+V +LDLS+ + IA L ++ L + +N + S+P+ IG LSKL +L++S N L
Sbjct: 78 RVIVLDLSSEGITGCISPCIANLTDLTRLQLSNNSFRGSIPSEIGFLSKLSILDISMNSL 137
Query: 113 E-SLPNTIEECRALEELHANFNELT-KLPDTLGFELHSLRKLSVNSNKLA-QLPSSTSHM 169
E ++P+ + C L+E+ + N+L ++P G +L L+ L + SNKL+ +P S
Sbjct: 138 EGNIPSELTSCSKLQEIDLSNNKLQGRIPSAFG-DLTELQTLELASNKLSGYIPPSLGSN 196
Query: 170 TALRALDARLNCLRALPDGXXXXXXXXXXXVSQNFQFLRELPYAVGLLASLRELDVSYNS 229
+L +D N L V N +LP A+ +SL +LD+ +NS
Sbjct: 197 LSLTYVDLGRNALTGEIPESLASSKSLQVLVLMNNALSGQLPVALFNCSSLIDLDLKHNS 256
Query: 230 I-------------------------AALPDSMGCLTKLARFSAVGNPLVSPPMDVVEQ 263
+P S+G L+ L S + N LV D+ +
Sbjct: 257 FLGSIPPITAISLQMKYLDLEDNHFTGTIPSSLGNLSSLIYLSLIANNLVGTIPDIFDH 315
>Os04g0222300
Length = 1343
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 8/189 (4%)
Query: 71 SIIARLLNVVVLDVRSNQLK-SLPNSIGCLSKLKVLNVSGNLLE-SLPNTIEECRALEEL 128
S + L N+V LD+ +NQL ++P SI + KL+VLN+SGN++ ++P I R L+ L
Sbjct: 945 STLLNLSNLVWLDLSNNQLTGTIPESIMLMDKLQVLNLSGNIMSGTIPRQIGHLRNLQTL 1004
Query: 129 HANFNELTK-LPDTLGFELHSLRKLSVNSNKLAQ-LPSSTSHMTALRALDARLNCLR-AL 185
N N + LP+ LG L +L+ L ++ N ++ +P+S HM +L +D N L AL
Sbjct: 1005 ILNNNNFSGVLPNDLG-NLSNLQYLVLSKNHMSSTIPASLFHMNSLITVDLSQNSLEGAL 1063
Query: 186 PDGXXXXXXXXXXXVSQNFQFLRELPYAVGLLASLRELDVSYNSI-AALPDSMGCLTKLA 244
P +S N F R +P + G L++S+NS+ + P+S L L
Sbjct: 1064 PVDIGQLNHIDRIDLSSNRLFGR-IPESFGQFLMTTYLNLSHNSLNGSFPNSFDKLINLK 1122
Query: 245 RFSAVGNPL 253
N L
Sbjct: 1123 SLDVSYNDL 1131
>Os11g0692300 Similar to Bacterial blight resistance protein
Length = 1025
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 35 LDMSGMSMDA--LPHLTMSLGQVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKS- 91
+ + G + DA +P +L +T+LDL+ NL + I L + L + NQL
Sbjct: 321 ISLGGNNFDAGPIPTELSNLTMLTVLDLTTCNLTGNIPADIGHLGQLSWLHLAMNQLTGP 380
Query: 92 LPNSIGCLSKLKVLNVSGNLLE-SLPNTIEE--------------------------CRA 124
+P S+G LS L +L + GNLL+ SLP+T++ CR
Sbjct: 381 IPASLGNLSSLAILLLKGNLLDGSLPSTVDSMNSLTAVDVTENNLHGDLNFLSTVSNCRK 440
Query: 125 LEELHANFNELTK-LPDTLGFELHSLRKLSVNSNKL-AQLPSSTSHMTALRALDARLNCL 182
L L + N +T LPD +G L+ ++++NKL LP++ S++TAL +D N L
Sbjct: 441 LSTLQMDLNYITGILPDYVGNLSSQLKWFTLSNNKLTGTLPATISNLTALEVIDLSHNQL 500
Query: 183 R-ALPDGXXXXXXXXXXXVSQNFQFLRELPYAVGLLASLRELDVSYNSIA-ALPDSMGCL 240
R A+P+ +S N +P LL ++ +L + N I+ ++P M L
Sbjct: 501 RNAIPESIMTIENLQWLDLSGN-SLSGFIPSNTALLRNIVKLFLESNEISGSIPKDMRNL 559
Query: 241 TKLARFSAVGNPLVS--PP----MDVVEQGLDAMRAYLTARMNGGDGKRKK 285
T L N L S PP +D + + LD R +L+ + G K+
Sbjct: 560 TNLEHLLLSDNKLTSTIPPSLFHLDKIVR-LDLSRNFLSGALPVDVGYLKQ 609
>Os11g0640300 Disease resistance protein family protein
Length = 1118
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 54 QVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLE 113
Q +L + ++ IP L + VLD+++ ++ LP + LS L+ LN+S ++
Sbjct: 594 QKMVLSGQKSEIKEIPSDYCRYLTYLRVLDLQATKINKLPEKVEMLSNLRYLNLSQTDID 653
Query: 114 SLPNTIEECRALEELHANFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALR 173
LP +I + L L+ + + +PD +G ++HSLR L+++ + +LP S + L+
Sbjct: 654 KLPESIGRLQYLVSLNISQTCIATVPDYIG-KIHSLRYLNLSQTDIGKLPDSICSLRLLQ 712
Query: 174 ALD-ARLNCLRALPDGXXXXXXXXXXXVSQNFQFLRELPYAVGLLASLRELDV-SYNSIA 231
L +R L LP + + +L E+P + L +++EL+V S+
Sbjct: 713 TLQLSRCEKLTKLPQNIGSVTSLQRLDLEGCY-YLSEMPQDISNLKNVKELNVLECPSLD 771
Query: 232 ALPDSMGCLTK---LARFSAVG---NPLV 254
+P + LTK L R+ A NP++
Sbjct: 772 KMPCGLSALTKIEALPRYIATSGDNNPIL 800
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,949,327
Number of extensions: 415120
Number of successful extensions: 5778
Number of sequences better than 1.0e-10: 36
Number of HSP's gapped: 5784
Number of HSP's successfully gapped: 51
Length of query: 352
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 250
Effective length of database: 11,709,973
Effective search space: 2927493250
Effective search space used: 2927493250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)