BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0555700 Os04g0555700|AK069329
(139 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0555700 Similar to Actin-depolymerizing factor (ADF) 285 7e-78
Os02g0663800 Similar to Actin-depolymerizing factor (ADF) 259 5e-70
Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF ... 227 2e-60
Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2) 214 2e-56
Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-... 185 8e-48
Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF ... 183 3e-47
AK105744 183 3e-47
Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-... 177 2e-45
Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-... 172 5e-44
Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-... 171 2e-43
Os03g0820500 Similar to WCOR719 167 3e-42
Os07g0297500 146 6e-36
>Os04g0555700 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 285 bits (729), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM
Sbjct: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKARAL 139
LQATDPSEMSMDIVKARAL
Sbjct: 121 LQATDPSEMSMDIVKARAL 139
>Os02g0663800 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 259 bits (661), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/139 (88%), Positives = 133/139 (95%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
M+NSASGMAV DECKLKF ELK+KRSFRFI FKI+E+ QQVVVDRLGQPG++YDDFTA +
Sbjct: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
PA ECRYAVFDFDFVTDENCQKSKIFFISW+PDTS+VRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKARAL 139
LQATDPSEMSMDIVK+RAL
Sbjct: 121 LQATDPSEMSMDIVKSRAL 139
>Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1)
Length = 139
Score = 227 bits (578), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 102/138 (73%), Positives = 122/138 (88%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MANSASG+AV DECK KFQELK++R FRFI FKID++ ++ V+RLGQ + Y+DF A++
Sbjct: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
PA ECRYAV+D DFVTDENCQKSKIFF SWSPDT++ RSKMLYASSKDRF+RELDGIQ E
Sbjct: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
Query: 121 LQATDPSEMSMDIVKARA 138
+QATDPSEMS+DI++ARA
Sbjct: 121 IQATDPSEMSLDIIRARA 138
>Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2)
Length = 138
Score = 214 bits (544), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/137 (73%), Positives = 126/137 (91%)
Query: 2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61
AN+ASGMAV DECKLKF ELK+KR++RFI +KIDE+ + VVV+++G+P YDDF AS+P
Sbjct: 1 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 60
Query: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
A+ECRYA+FD+DFVT+ENCQKSKIFFI+WSPDTS+VRSKM+YASSKDRFKRELDGIQVEL
Sbjct: 61 ANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 120
Query: 122 QATDPSEMSMDIVKARA 138
QATDP+E+ +D+++ RA
Sbjct: 121 QATDPTEVGLDVIRGRA 137
>Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 185 bits (470), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 114/137 (83%)
Query: 2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61
AN++SG+ V ECK F EL+ K+S R++ FKID++ ++VVV++ G +++DDF S+P
Sbjct: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
Query: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
S+CRYA++DFDFVT+ENCQKSKIFF++WSP S++R+KMLYA+SK+RF+RELDG+ E+
Sbjct: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
Query: 122 QATDPSEMSMDIVKARA 138
QATDPSE+ +++++ RA
Sbjct: 128 QATDPSELDIELLRERA 144
>Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3)
Length = 139
Score = 183 bits (465), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 114/138 (82%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MANS+SG+A+ D+CKLKF EL+SKR RFITF +D + ++++VD++G +Y+DFT+S+
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
P +CR+A++DFDF+T E+ KS+IF+I WSPD +KVRSKMLYASS +RFK+EL+GIQ+E
Sbjct: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
Query: 121 LQATDPSEMSMDIVKARA 138
+QATD E+S+D +K R
Sbjct: 121 VQATDAGEISLDALKDRV 138
>AK105744
Length = 139
Score = 183 bits (465), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 114/138 (82%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MANS+SG+A+ D+CKLKF EL+SKR RFITF +D + ++++VD++G +Y+DFT+S+
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
P +CR+A++DFDF+T E+ KS+IF+I WSPD +KVRSKMLYASS +RFK+EL+GIQ+E
Sbjct: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
Query: 121 LQATDPSEMSMDIVKARA 138
+QATD E+S+D +K R
Sbjct: 121 VQATDAGEISLDALKDRV 138
>Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 112/137 (81%)
Query: 2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61
+N++SGM V + + F EL+ K++FR++ FKI+E+ +QVVV++ G ++YDDF AS+P
Sbjct: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
Query: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
++CRYA++DFDFVT EN QKSKIFFI+WSP TS++R+KMLY++SKDR K+ELDG E+
Sbjct: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
Query: 122 QATDPSEMSMDIVKARA 138
QATDP+E+ +++++ RA
Sbjct: 128 QATDPTEVDLEVLRERA 144
>Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5)
Length = 143
Score = 172 bits (437), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 104/135 (77%)
Query: 4 SASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPAS 63
+ GM V +EC+ F E+K K+ RF+ +KIDER++ V+VD++G PG+ Y++ A++P
Sbjct: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
Query: 64 ECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQA 123
+CRYAVFDFDFVT +NCQKSKIFFI+WSP S++R+K+LYA+SK +R LDG+ E+QA
Sbjct: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
Query: 124 TDPSEMSMDIVKARA 138
TD SEM D+++ RA
Sbjct: 128 TDSSEMGYDVIRGRA 142
>Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 151
Score = 171 bits (432), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 108/137 (78%)
Query: 2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61
S + + V ++ K F ELK ++ R++ FKID+R +++VV++ G PG++YDDFTAS+P
Sbjct: 12 GGSPAWIEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP 71
Query: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
A +CRYAV+D DFV+D+NC+KSKIFFISWSP S++R+K +YA S+++F+ ELDG+ E+
Sbjct: 72 ADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEI 131
Query: 122 QATDPSEMSMDIVKARA 138
QATDP +M +++++ RA
Sbjct: 132 QATDPDDMDLEVLRGRA 148
>Os03g0820500 Similar to WCOR719
Length = 150
Score = 167 bits (422), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 107/146 (73%), Gaps = 11/146 (7%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MAN+ SG+AV +ECK +FQEL++ R+ RF+ FKID+ +QVVVDR+G +D+ TAS+
Sbjct: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
Query: 61 PASECRYAVFDFDFVTDENCQ-----------KSKIFFISWSPDTSKVRSKMLYASSKDR 109
PA CRYAV+D DF + +SKIFF+SWSP + VRSKM+YASS +
Sbjct: 61 PADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
Query: 110 FKRELDGIQVELQATDPSEMSMDIVK 135
FK+ELDG+Q++LQATDPSE+++D++K
Sbjct: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
>Os07g0297500
Length = 169
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61
S + + V ++ K F EL ++ R++ FKID+R +++VV++ G P ++YDDFTAS+P
Sbjct: 34 GGSPAWIEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP 93
Query: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
A AV+D DFV+D+NC+KSKIFFISWSP S +R+K +YA +++F+ ELDG+ E+
Sbjct: 94 AD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEI 149
Query: 122 QATDPSEMSMDIVKARA 138
QATDP +M +++++ RA
Sbjct: 150 QATDPDDMDLEVLRGRA 166
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,124,244
Number of extensions: 141974
Number of successful extensions: 328
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 326
Number of HSP's successfully gapped: 12
Length of query: 139
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 49
Effective length of database: 12,336,541
Effective search space: 604490509
Effective search space used: 604490509
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 151 (62.8 bits)