BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0540300 Os04g0540300|Os04g0540300
(372 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0540300 Phytochelatin synthetase-like conserved region... 782 0.0
Os05g0386800 Similar to Phytochelatin synthetase-like prote... 340 1e-93
Os07g0604300 Similar to Phytochelatin synthetase (Fragment) 222 3e-58
AK102170 216 1e-56
Os03g0416200 BRITTLE CULM1 216 2e-56
Os03g0416300 Similar to Phytochelatin synthetase (Fragment) 212 3e-55
Os03g0754500 Similar to Phytochelatin synthetase-like prote... 159 3e-39
Os10g0497700 Similar to Phytochelatin synthetase 148 7e-36
Os07g0604400 Similar to BRITTLE CULM1 116 3e-26
>Os04g0540300 Phytochelatin synthetase-like conserved region family protein
Length = 372
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/372 (100%), Positives = 372/372 (100%)
Query: 1 MDVDQLILFVFVCCLSSRFADAYDPVDPNGNIIINWDFQSIENVYTVMVSVHNHQLYRHI 60
MDVDQLILFVFVCCLSSRFADAYDPVDPNGNIIINWDFQSIENVYTVMVSVHNHQLYRHI
Sbjct: 1 MDVDQLILFVFVCCLSSRFADAYDPVDPNGNIIINWDFQSIENVYTVMVSVHNHQLYRHI 60
Query: 61 EQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNN 120
EQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNN
Sbjct: 61 EQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNN 120
Query: 121 QVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSCS 180
QVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSCS
Sbjct: 121 QVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSCS 180
Query: 181 NATKVNATSEGEKPELPAGDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNY 240
NATKVNATSEGEKPELPAGDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNY
Sbjct: 181 NATKVNATSEGEKPELPAGDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNY 240
Query: 241 NQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQDGNV 300
NQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQDGNV
Sbjct: 241 NQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQDGNV 300
Query: 301 QTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAAQLIAS 360
QTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAAQLIAS
Sbjct: 301 QTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAAQLIAS 360
Query: 361 SCLLLPFIFLIM 372
SCLLLPFIFLIM
Sbjct: 361 SCLLLPFIFLIM 372
>Os05g0386800 Similar to Phytochelatin synthetase-like protein 2
Length = 457
Score = 340 bits (872), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 242/424 (57%), Gaps = 77/424 (18%)
Query: 21 DAYDPVDPNGNIIINWDFQS-IENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWG 79
+AYD +DPNGNI I WD S + Y +V++ N+Q +RHI+ PGW+L W WA E+IW
Sbjct: 35 EAYDALDPNGNITIKWDVMSWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWS 94
Query: 80 MTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQN-- 137
M GA+ TEQGDC + +G T PHCC+K P +VDL PGTPYN Q+++CC+ GV+++ Q+
Sbjct: 95 MVGAQTTEQGDCSKFKGGT-PHCCKKDPTVVDLLPGTPYNMQIANCCKAGVINTFNQDPS 153
Query: 138 NRTSTAAFQMVVGGFRRAT---------------YHDGDRGPALPSRFGVG--------- 173
N S+ + + G T Y G P++F G
Sbjct: 154 NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTGDGRRATQAL 213
Query: 174 --------------------------------VPGYSCSNATKVNATSEGE-----KPEL 196
V +CS + N TS G P L
Sbjct: 214 MTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCSCGCQNNGTSPGSCVNENSPYL 273
Query: 197 PA---GDGEAVA-PVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLV 252
+ G G+ P+ +CT HMCP+R+HWHVK++Y+EYWRVK+TITN+N NY+ WNLV
Sbjct: 274 QSAIDGPGKWTGQPLVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLV 333
Query: 253 VQHPNLRSLTQLFSFNYQPLIEYGT-LNDTGMFWGIQYYNEMMLQD---GNVQTEMILKK 308
QHPN ++TQLFSFNY+PL YG+ +NDT MFWG+++YN++++Q GN Q+E++L+K
Sbjct: 334 AQHPNFNNITQLFSFNYKPLTPYGSKINDTAMFWGVKFYNDLLMQAGPLGNAQSELLLRK 393
Query: 309 DKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAAQLIASSCLLLPFI 368
D DFTF GWAFP RVYF+G CVMPPPD YP LPN P ++ Q + S L+ +
Sbjct: 394 DSKDFTFDKGWAFPHRVYFNGDNCVMPPPDAYPWLPNASPLTK----QPLTLSVLVFSIV 449
Query: 369 FLIM 372
+
Sbjct: 450 LATL 453
>Os07g0604300 Similar to Phytochelatin synthetase (Fragment)
Length = 446
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 140/207 (67%), Gaps = 17/207 (8%)
Query: 172 VGVPGYSCS-NATKVNATSEGEKPELPA----GDGEAVAPVFRCTDHMCPVRVHWHVKIS 226
V P SC K + EG P L + + +++ P+ +CT HMCP+RVHWHVK++
Sbjct: 238 VNCPTCSCGCQNNKPGSCVEGNSPYLASVVNTHNKDSLTPLVQCTSHMCPIRVHWHVKVN 297
Query: 227 YREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWG 286
Y+EYWRVK+T+TN+N NYS WNLV QHP+ +LT +FSFNY+ L YG +NDT M WG
Sbjct: 298 YKEYWRVKITVTNFNYRMNYSQWNLVTQHPSFDNLTTIFSFNYKSLNPYGVINDTAMLWG 357
Query: 287 IQYYNEMMLQ---DGNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLL 343
I+YYN++++ DGNVQ+E++ KKD FTF GWAFPRRVYF+G CVMPPPD YP L
Sbjct: 358 IKYYNDLLMTAGPDGNVQSELLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWL 417
Query: 344 PNGGPDSRVSAAQLIASSCLLLPFIFL 370
PN +RV ++ +LLPFI +
Sbjct: 418 PNA--STRVMSS-------ILLPFITI 435
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 119/189 (62%), Gaps = 6/189 (3%)
Query: 1 MDVDQLILFVFVCCLSSRFADAYDPVDPNGNIIINWD-FQSIENVYTVMVSVHNHQLYRH 59
M V +L F L ++AYDP+DPNGNI I WD Q + Y +VS++N+Q YRH
Sbjct: 8 MGVSVALLVAFFSSLIPS-SEAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYNYQQYRH 66
Query: 60 IEQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYN 119
I+ PGW+L W WA EIIW M G +ATEQGDC + + + PHCC+K P IVDL PGTPYN
Sbjct: 67 IQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFK-SNIPHCCKKDPEIVDLLPGTPYN 125
Query: 120 NQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSC 179
Q+++CC+GGVL+S Q+ + A+FQ+ VG + T + R P + G PGY+C
Sbjct: 126 MQIANCCKGGVLNSWAQDPANAIASFQVSVG--QAGTTNKTVRVPRNFTLKSPG-PGYTC 182
Query: 180 SNATKVNAT 188
+A V T
Sbjct: 183 GSAKVVRPT 191
>AK102170
Length = 457
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 133/187 (71%), Gaps = 13/187 (6%)
Query: 178 SCSNATKVNATSEGE-----KPELPA---GDGEAVA-PVFRCTDHMCPVRVHWHVKISYR 228
+CS + N TS G P L + G G+ P+ +CT HMCP+R+HWHVK++Y+
Sbjct: 250 TCSCGCQNNGTSPGSCVNENSPYLQSAIDGPGKWTGQPLVQCTSHMCPIRIHWHVKLNYK 309
Query: 229 EYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEY-GTLNDTGMFWGI 287
EYWRVKVTITN+N NY+ WNLV+QHPN ++TQLFSFNY+PL Y G +NDT MFWG+
Sbjct: 310 EYWRVKVTITNFNYRMNYTQWNLVIQHPNFNNITQLFSFNYKPLTPYGGRINDTAMFWGV 369
Query: 288 QYYNEMMLQD---GNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLP 344
++YN++++Q GN Q+E++L+KD FTF GWAFP RVYF+G CVMPPPD YP LP
Sbjct: 370 KFYNDLLMQAGPLGNAQSELLLRKDSMAFTFDKGWAFPHRVYFNGDNCVMPPPDAYPWLP 429
Query: 345 NGGPDSR 351
N P ++
Sbjct: 430 NASPLTK 436
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 107/173 (61%), Gaps = 9/173 (5%)
Query: 20 ADAYDPVDPNGNIIINWD-FQSIENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIW 78
+AYD +DPNGNI I WD Q + Y +V++ N+Q +RHI+ PGW+L W WA E+IW
Sbjct: 34 TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 93
Query: 79 GMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNN 138
M GA+ TEQGDC + +G PHCC+K P IVDL PGTPYN Q+++CC+ GV+++ Q+
Sbjct: 94 SMVGAQTTEQGDCSKFKG-NPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDP 152
Query: 139 RTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGV--PGYSCSNATKVNATS 189
+ ++FQ+ VG ++ LP F + PGY+C A V T
Sbjct: 153 LNAASSFQISVG-----LAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTK 200
>Os03g0416200 BRITTLE CULM1
Length = 468
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 10/176 (5%)
Query: 197 PAGDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHP 256
P DG AP+ +CT HMCP+RVHWHVK++Y++YWR K+ ITN+N NY+ W LV QHP
Sbjct: 295 PRKDG---APLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHP 351
Query: 257 NLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQD---GNVQTEMILKKDKSDF 313
NL ++T++FSF Y+PL+ YG +NDTGMF+G+++YN+++++ GNVQ+E++++KD + F
Sbjct: 352 NLNNVTEVFSFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTF 411
Query: 314 TFSGGWAFPRRVYFDGHECVMPPPDQYPLLPN----GGPDSRVSAAQLIASSCLLL 365
TFS GWAFPR++YF+G EC MPPPD YP LPN G P S +AA I LL+
Sbjct: 412 TFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSAPIGPPRSVAAAASAILVVLLLV 467
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%), Gaps = 9/191 (4%)
Query: 1 MDVDQLILFVFVCCLSSRFADAYDPVDPNGNIIINWDFQS-IENVYTVMVSVHNHQLYRH 59
M++ + L + ++ A AYDP+DP GNI I WD S + Y MV++ N+Q+YR
Sbjct: 1 MELHRCSLLALLLAVTCSVAVAYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQ 60
Query: 60 IEQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYN 119
I PGW + W WA E+IW + GA+ATEQGDC + +G PH C++ P IVDL PG PYN
Sbjct: 61 ILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGI-PHSCKRTPAIVDLLPGVPYN 119
Query: 120 NQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVG--VPGY 177
Q+++CC+ GV+S+ Q+ S +AFQ+ VG ++ LP+ F + PGY
Sbjct: 120 QQIANCCKAGVVSAYGQDPAGSVSAFQVSVG-----LAGTTNKTVKLPTNFTLAGPGPGY 174
Query: 178 SCSNATKVNAT 188
+C AT V +T
Sbjct: 175 TCGPATIVPST 185
>Os03g0416300 Similar to Phytochelatin synthetase (Fragment)
Length = 458
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 130/181 (71%), Gaps = 8/181 (4%)
Query: 172 VGVPGYSCS-NATKVNATSEGEKPELPA---GDGE-AVAPVFRCTDHMCPVRVHWHVKIS 226
V P +C K + EG P L + G G+ ++ P+ +CT HMCP+RVHWHVK++
Sbjct: 240 VNCPKCACGCQNKKPGSCVEGNSPYLASVVNGPGKGSLTPLVQCTPHMCPIRVHWHVKLN 299
Query: 227 YREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWG 286
YR+YWRVKVTITN+N NYS WNLVVQHPN +++ +FSFNY+ L YG +NDT M WG
Sbjct: 300 YRDYWRVKVTITNWNYRMNYSQWNLVVQHPNFENVSTVFSFNYKSLNPYGVINDTAMMWG 359
Query: 287 IQYYNEMML---QDGNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLL 343
++YYN++++ DGNVQ+E++ +KD+S FTF GWAFPRR+YF+G CVMP PD YP L
Sbjct: 360 VKYYNDLLMVAGPDGNVQSELLFRKDRSTFTFDKGWAFPRRIYFNGESCVMPSPDLYPWL 419
Query: 344 P 344
P
Sbjct: 420 P 420
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 107/172 (62%), Gaps = 13/172 (7%)
Query: 19 FADAYDPVDPNGNIIINWDF-QSIENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEII 77
FA+AYDP+DPNGNI I WD Q + Y +V+++N Q YRHI+ PGW L W WA EII
Sbjct: 26 FAEAYDPLDPNGNITIKWDITQWTPDGYVAVVTIYNFQKYRHIQAPGWSLGWAWAKKEII 85
Query: 78 WGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQN 137
W M G +ATEQGDC + A PHCC++ P +VDL PG PYN Q +CC+GGVL+S Q+
Sbjct: 86 WSMAGGQATEQGDCSAFK-ANIPHCCKRDPRVVDLVPGAPYNMQFGNCCKGGVLTSWVQD 144
Query: 138 NRTSTAAFQMVVGGFRRATYHDG--DRGPALPSRFGVGV--PGYSCSNATKV 185
+ A+FQ+ VG H G ++ P F + PGYSC A +V
Sbjct: 145 PLNAVASFQITVG-------HSGTSNKTVKAPKNFTLKAPGPGYSCGLAQEV 189
>Os03g0754500 Similar to Phytochelatin synthetase-like protein 2
Length = 218
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 107/171 (62%), Gaps = 9/171 (5%)
Query: 21 DAYDPVDPNGNIIINWD-FQSIENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWG 79
+AYD +DPNGNI I WD Q + Y +V++ N+Q +RHI+ PGW+L W WA E+IW
Sbjct: 34 EAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWS 93
Query: 80 MTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNR 139
M GA+ TEQGDC + +G PHCC+K P IVDL PGTPYN Q+++CC+ GV+++ Q+
Sbjct: 94 MVGAQTTEQGDCSKFKG-NPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL 152
Query: 140 TSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGV--PGYSCSNATKVNAT 188
+ ++FQ+ VG ++ LP F + PGY+C A V T
Sbjct: 153 NAASSFQISVG-----LAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPT 198
>Os10g0497700 Similar to Phytochelatin synthetase
Length = 425
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 119/220 (54%), Gaps = 29/220 (13%)
Query: 22 AYDPVDPNGNIIINWD-FQSIENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWGM 80
AYD +DPNGNI I WD Q + Y +V++ N+Q +RHI+ PGW+L W W E+IW M
Sbjct: 27 AYDSLDPNGNITIKWDVMQWTPDGYAAVVTLSNYQQFRHIQPPGWQLGWTWQQKEVIWSM 86
Query: 81 TGAEATEQGDCHRIR-GATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNR 139
GA+A EQGDC + G+ PH C+K P +VDL PG P + Q+++CC+ G LS+ +Q+
Sbjct: 87 YGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPA 146
Query: 140 TSTAAFQMVVGGFRRATYHDGDRGPA--LPSRFGVGV--PGYSCSNATKVNATSEGEKPE 195
S A+FQ++VG H G+ +P F + PGY+CS A V +
Sbjct: 147 NSAASFQIIVG-------HSGNSNETVRVPKNFSLMAPGPGYTCSRAMIVKPS------R 193
Query: 196 LPAGDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKV 235
+ DG V + W+V +Y ++ KV
Sbjct: 194 FLSPDGRRATQVL----------MTWNVICTYSQFLAQKV 223
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 101/143 (70%), Gaps = 7/143 (4%)
Query: 206 PVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLF 265
P+ +CT HMCPV+++WH+ + +E++RVK+T+TN N N+++WNLVVQ+ + +TQ+
Sbjct: 280 PLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILDITQIS 339
Query: 266 SFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQD---GNVQTEMILKKD---KSDFTFSGGW 319
FNY+ I+ G +NDT M WG++ Y ++++Q GNVQ E+I++KD S + G
Sbjct: 340 GFNYKS-IQVGKINDTTMLWGVKPYYDLLMQAGPLGNVQGELIVRKDFRASSTTNNNKGR 398
Query: 320 AFPRRVYFDGHECVMPPPDQYPL 342
AFP RVYF+G CVMPPPD YP+
Sbjct: 399 AFPVRVYFNGDNCVMPPPDAYPV 421
>Os07g0604400 Similar to BRITTLE CULM1
Length = 104
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 64/79 (81%)
Query: 205 APVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQL 264
AP+ +CT HMCPVRVHWHVK++YREYWR K+TI N+N NY+ W LV QHPNL ++T++
Sbjct: 3 APLLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNFNYRMNYTGWTLVAQHPNLDNITEV 62
Query: 265 FSFNYQPLIEYGTLNDTGM 283
FSF+Y+P++ YG+++ M
Sbjct: 63 FSFDYKPVVSYGSISKYFM 81
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.138 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,620,448
Number of extensions: 663936
Number of successful extensions: 1676
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1656
Number of HSP's successfully gapped: 15
Length of query: 372
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 270
Effective length of database: 11,709,973
Effective search space: 3161692710
Effective search space used: 3161692710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)