BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0537800 Os04g0537800|AK103654
(276 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0537800 Protein of unknown function DUF26 domain conta... 433 e-122
Os02g0643900 270 6e-73
Os06g0253600 Protein of unknown function DUF26 domain conta... 121 4e-28
Os02g0734800 Protein of unknown function DUF26 domain conta... 114 6e-26
Os03g0140500 Protein of unknown function DUF26 domain conta... 108 6e-24
Os05g0112800 Protein of unknown function DUF26 domain conta... 79 3e-15
Os08g0136300 Similar to (clone wusl1032) mRNA sequence 67 2e-11
Os03g0564600 Protein of unknown function DUF26 domain conta... 66 2e-11
Os03g0277700 Protein of unknown function DUF26 domain conta... 65 7e-11
Os08g0136500 Protein of unknown function DUF26 domain conta... 64 9e-11
>Os04g0537800 Protein of unknown function DUF26 domain containing protein
Length = 276
Score = 433 bits (1113), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/276 (79%), Positives = 220/276 (79%)
Query: 1 MHQLDRLCYXXXXXXXXXXXXXEAATGTFIYAGCSPSKYQPGTPFEGXXXXXXXXXXXXX 60
MHQLDRLCY EAATGTFIYAGCSPSKYQPGTPFEG
Sbjct: 1 MHQLDRLCYAVVVLVVIGATVAEAATGTFIYAGCSPSKYQPGTPFEGNLNSLLASIANAA 60
Query: 61 XXGGYNSFTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQ 120
GGYNSFTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQ
Sbjct: 61 PNGGYNSFTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQ 120
Query: 121 LEGCYVRYDSSNFVGQPDNAMVYRKCSTSTSGDGDFLKNRDAVLAALQGGLANGYKXXXX 180
LEGCYVRYDSSNFVGQPDNAMVYRKCSTSTSGDGDFLKNRDAVLAALQGGLANGYK
Sbjct: 121 LEGCYVRYDSSNFVGQPDNAMVYRKCSTSTSGDGDFLKNRDAVLAALQGGLANGYKVSSS 180
Query: 181 XXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYFRPS 240
CLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYFRPS
Sbjct: 181 GNVQGVSQCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYFRPS 240
Query: 241 QDYSQDDVGRTXXXXXXXXXXXXXXXXFISFLRKSC 276
QDYSQDDVGRT FISFLRKSC
Sbjct: 241 QDYSQDDVGRTVAIIVGILAGLAILVVFISFLRKSC 276
>Os02g0643900
Length = 297
Score = 270 bits (691), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/251 (57%), Positives = 162/251 (64%), Gaps = 6/251 (2%)
Query: 29 FIYAGCSPSKYQPGTPFEGXXXXXXXXXXXXXXXGG-YNSFTAGSNGTGD---GAAAYGL 84
FIYAGCSPSKY+P T F+ G YNSFTAG D G AAYGL
Sbjct: 35 FIYAGCSPSKYEPNTAFQSNLNSLLSSIASTASSGAAYNSFTAGGGAGPDPAAGTAAYGL 94
Query: 85 YQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVYR 144
YQCRGDL DC ACVR V +L VCA AYAASLQ++GCYVRYD+++F+G+ D YR
Sbjct: 95 YQCRGDLSPGDCVACVRQTVARLGAVCANAYAASLQVDGCYVRYDAADFIGRADTTTAYR 154
Query: 145 KCSTSTSGDGDFLKNRDAVLAALQGGLANGYKXXXXXXXXXXXXCLGDLAAGDCTTCLAQ 204
KCS+STS DG FL +RD VL LQ A GYK CLGD+ A DCT CLA+
Sbjct: 155 KCSSSTSRDGAFLSSRDGVLGELQA--AAGYKLSTSGTVQGVAQCLGDVPANDCTACLAE 212
Query: 205 AVGQLKGTCGTSLAADVYLAQCYVRYWANGFYFRPSQDYSQDDVGRTXXXXXXXXXXXXX 264
AVGQLKG CGT+LAADVYLAQCYVRYWANG+YFRP+ D S DDVGRT
Sbjct: 213 AVGQLKGACGTALAADVYLAQCYVRYWANGYYFRPNSDNSGDDVGRTVAIIIGILAGLAL 272
Query: 265 XXXFISFLRKS 275
FISFLRK+
Sbjct: 273 LVVFISFLRKA 283
>Os06g0253600 Protein of unknown function DUF26 domain containing protein
Length = 321
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 6/209 (2%)
Query: 29 FIYAGCSPSKYQPGTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNGTGDGAAAYGLYQCR 88
F+YAGCS ++Y GT + Y ++T+ S +G G G+YQCR
Sbjct: 28 FVYAGCSQARYDAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLV--GVYQCR 85
Query: 89 GDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVYRKCST 148
DL A C CVR A +L +C +A A +QL C+VRY + +F+G+ D ++++KC
Sbjct: 86 SDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLFKKCGG 145
Query: 149 STSGDGDFLKNRDAVLAALQGGLA----NGYKXXXXXXXXXXXXCLGDLAAGDCTTCLAQ 204
D + RDA L AL A Y+ C+GDL A CT C++
Sbjct: 146 EGGSDTGVVAMRDAALGALVAAAAPAGDGSYRAGAAGYVQAMSQCVGDLGAKACTDCVSA 205
Query: 205 AVGQLKGTCGTSLAADVYLAQCYVRYWAN 233
A QLK CG + A +VYL +CY R+W+N
Sbjct: 206 ASSQLKAGCGYASAGEVYLGKCYARFWSN 234
>Os02g0734800 Protein of unknown function DUF26 domain containing protein
Length = 278
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 9/206 (4%)
Query: 29 FIYAGCSPSKYQPGTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNGTGDGAAAYGLYQCR 88
F+YAGCS +Y GT + Y +FT+ ++ + G+YQCR
Sbjct: 33 FVYAGCSQGRYASGTQYASDVDSVLTSVANSAPYSPYANFTSPTSNS-----VVGVYQCR 87
Query: 89 GDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVYRKCST 148
DL + C CVR A+ +L+ +CA A ++QL C+VRY + F+G+ D A++++KC
Sbjct: 88 SDLPASVCTGCVRSAISRLSSLCAWATGGAVQLRACFVRYGNDTFLGKQDTAVLFKKCGG 147
Query: 149 STSGDGDFLKNRDA---VLAALQGGLANGYKXXXXXXXXXXXXCLGDLAAGDCTTCLAQA 205
S GD RD+ L A GY+ C+GDL A C+ C++ A
Sbjct: 148 S-PGDAGGAAMRDSALGALVAAAAPAGGGYRAGGSGGVQAMSQCVGDLGAKACSDCVSAA 206
Query: 206 VGQLKGTCGTSLAADVYLAQCYVRYW 231
GQLK CG + A +VYL +CY R+W
Sbjct: 207 AGQLKAGCGYATAGEVYLGKCYARFW 232
>Os03g0140500 Protein of unknown function DUF26 domain containing protein
Length = 286
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 81 AYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNA 140
+GL+QCRGDL +DCAACV A+ +EVC A+ AA +QL GC Y+ S F
Sbjct: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGTQ 141
Query: 141 MVYRKCSTSTSGDGDFLKNRDAVLAALQ---GGLANGYKXXXXXXXXXXXXCLGDLAAGD 197
M+++ C T G DF RD A ++ GG G+ C GDL++GD
Sbjct: 142 MLFKTCGTGGGGGTDFEMRRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSSGD 201
Query: 198 CTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRY 230
C C+ QAV ++ CG + + VYL +CY+ Y
Sbjct: 202 CGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
>Os05g0112800 Protein of unknown function DUF26 domain containing protein
Length = 272
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 82/206 (39%), Gaps = 12/206 (5%)
Query: 42 GTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVR 101
G P + G Y + TAG G DG+A +GL QCRGD+ DCA C
Sbjct: 44 GAPAQASVAQVLSELVPRASAGYYATATAGRGG--DGSAIWGLAQCRGDIPAPDCALCAS 101
Query: 102 DAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVYRKCSTSTSGDGD-FLKNR 160
A QL C A + + C+ RYD ++FVG PD +T + D + F K +
Sbjct: 102 AAARQLAGACRGRADARVWYDYCFARYDDADFVGLPDTGYALILLNTQNATDPEAFEKAQ 161
Query: 161 DAVLAALQGGLANGYKXXXXXXXXXXX---------XCLGDLAAGDCTTCLAQAVGQLKG 211
V+A + + C D+ A DC C+AQAV ++
Sbjct: 162 RKVMARVAADAGDAGGGGLARETARFKDGVTIYGLGWCTRDITAADCGLCVAQAVAEMPN 221
Query: 212 TCGTSLAADVYLAQCYVRYWANGFYF 237
C V + C RY F+F
Sbjct: 222 YCRFRRGCRVLYSSCMARYETYPFFF 247
>Os08g0136300 Similar to (clone wusl1032) mRNA sequence
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 22/175 (12%)
Query: 80 AAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPD- 138
A YGL QCRGD+ DC AC+ A Q+ C + L E C++RYD+ NF+G+ D
Sbjct: 85 AFYGLAQCRGDVSGGDCDACLAQAAKQMVSYCNYTSDSRLWYEYCFMRYDNYNFLGEVDT 144
Query: 139 ---------------NAMVYRKCSTSTSGDGDFLKNRDAVLAALQGGLANGYKXXXXXXX 183
N ++K + G K +A GL +
Sbjct: 145 REDASVTMRQWPDMDNPKAFQKAAGKAMG-----KATAQAVAVGSSGLGRAKEQYTPFVS 199
Query: 184 X-XXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYF 237
C DL+ C CL+ AV + CG+ + + C+ RY FYF
Sbjct: 200 VYALAQCTRDLSPPSCAQCLSAAVSKFDKACGSGPGCQIDYSSCWARYEIYPFYF 254
>Os03g0564600 Protein of unknown function DUF26 domain containing protein
Length = 246
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 68/180 (37%), Gaps = 13/180 (7%)
Query: 64 GYNSFTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEG 123
G++ T G G G+ +GL CRGD+ A CA C+R A VC + A + L+
Sbjct: 59 GFDIATVGVGGDGEDQRVHGLALCRGDVARATCAECIRAAGALARRVCPSKKDAVVWLDA 118
Query: 124 CYVRYDSSNFVGQPD--------NAMVYRKCSTSTSGDGDFLK-----NRDAVLAALQGG 170
C +RY F G+ D A V R S D + + R A L+ L
Sbjct: 119 CMLRYSGEPFFGEVDAEHRAVVPPARVLRGADRSADLDREVSRLMKRLTRTAYLSPLLFA 178
Query: 171 LANGYKXXXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRY 230
C DL+ GDC CL A+ QL V C +RY
Sbjct: 179 AGEAVAVGGAQRLHGMAQCTKDLSGGDCKMCLESAIDQLLARGCAKEGGKVLGGSCSLRY 238
>Os03g0277700 Protein of unknown function DUF26 domain containing protein
Length = 265
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 74/180 (41%), Gaps = 11/180 (6%)
Query: 68 FTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVR 127
F + G G+ YGL QCRGD+ +DC AC+ A Q+ C + + + C++R
Sbjct: 65 FATSTAGKGNNVI-YGLVQCRGDVSTSDCQACLASAANQILTSCNYQSDSRIWYDYCFMR 123
Query: 128 YDSSNFVGQ--PDNAMVYRKCSTSTSGD------GDFLKNRDA-VLAALQGGLANGY-KX 177
+++ NF GQ DN ++ + G + A V A GGL +
Sbjct: 124 FENENFFGQADTDNGVIMENVQAMDNAKAFQKAVGKVMSKATAQVSQAGSGGLGRVKDQY 183
Query: 178 XXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYF 237
C DL+ C CL+ AV + CG + + C VRY FYF
Sbjct: 184 TPFINIYGFAQCTRDLSPLTCAQCLSTAVSRFDQYCGAQQGCRILYSSCMVRYEIYPFYF 243
>Os08g0136500 Protein of unknown function DUF26 domain containing protein
Length = 280
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 72/187 (38%), Gaps = 23/187 (12%)
Query: 68 FTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVR 127
F S G G A YGL QCRGD+ DC AC+ A Q+ C + + E C++R
Sbjct: 79 FATSSAGRGIDAF-YGLAQCRGDVSGGDCDACLAQAAKQMVTNCNYTLDSRIWYEYCFMR 137
Query: 128 YDSSNFVGQ----------------PDNAMVYRKCSTSTSGDGDFLKNRDAVLAALQGGL 171
Y NF G+ DN M ++K +G K + GGL
Sbjct: 138 YVDFNFFGEMDTRTDASVTLRQWPDMDNPMAFQKAVGKATG-----KAVAHAVTMGSGGL 192
Query: 172 ANGYKX-XXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRY 230
+ C DLA C CL+ V + CG+ + + C+VRY
Sbjct: 193 GRAKEQCTSFVNVYALAQCTRDLAPPLCAQCLSTTVSKFAEACGSGQGCQIDYSSCWVRY 252
Query: 231 WANGFYF 237
FYF
Sbjct: 253 EIYPFYF 259
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,068,005
Number of extensions: 303806
Number of successful extensions: 890
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 870
Number of HSP's successfully gapped: 12
Length of query: 276
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 177
Effective length of database: 11,866,615
Effective search space: 2100390855
Effective search space used: 2100390855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)