Os04g0537800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os04g0537800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.43 | 0.383 | 12.3 | -0.694 | 0.74 | 0.727 | 0.704 | -1.63 | 0.277 | 4.75 | 29.4 | 259 | -- | -- |
| 67.57 | 0.383 | 12.3 | -0.796 | 0.71 | 0.655 | 0.624 | -- | 0.263 | 4.48 | 29.2 | 267 | -- | -- |
| 67.74 | 0.383 | 12.3 | -0.694 | 0.74 | 0.727 | -- | -1.01 | 0.277 | 4.75 | 29.4 | 259 | -- | -- |
| 67.82 | 0.384 | 12.3 | -0.87 | 0.735 | 0.619 | -- | -- | 0.259 | 4.85 | 29.3 | 257 | -- | -- |
| 83.49 | 0.426 | 12.3 | -0.733 | -- | 1 | -- | -0.164 | 0.367 | -- | 28.25 | 322 | -- | -- |
| 76.72 | 0.411 | 12.3 | -0.973 | 1.03 | -- | 0.79 | -- | 0.211 | 4.75 | -- | -- | -- | -- |
| 78.34 | 0.414 | 12.3 | -0.977 | 1.04 | -- | -- | -- | 0.207 | 4.8 | -- | -- | -- | -- |
| 83.52 | 0.426 | 12.3 | -0.758 | -- | 0.997 | -- | -- | 0.36 | -- | 28.22 | 322 | -- | -- |
| 87.48 | 0.436 | 12.3 | -- | 0.652 | 0.744 | -- | -- | 0.35 | 4.91 | 29.3 | 262 | -- | -- |
| 135.2 | 0.543 | 12.3 | -0.938 | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
| 103.48 | 0.476 | 12.3 | -- | 1.02 | -- | -- | -- | 0.316 | 4.83 | -- | -- | -- | -- |
| 98.42 | 0.462 | 12.3 | -- | -- | 1.07 | -- | -- | 0.452 | -- | 28.23 | 322 | -- | -- |
| 158.41 | 0.587 | 12.3 | -- | -- | -- | -- | -- | 0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.19 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 15 |
| 2 | 64.39 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 4 | 64.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 10 | 65.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 17 | 65.51 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 20 | 65.61 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 21 | 65.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 19 |
| 22 | 65.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 26 | 65.74 | wind | 1.0 | 30 | > th | dose independent | rect. | 14 | 18 |
| 34 | 65.88 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 35 | 65.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 15 |
| 38 | 65.92 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 7 | 15 |
| 43 | 65.94 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 44 | 65.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 48 | 66.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 53 | 66.13 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 54 | 66.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 58 | 66.21 | humidity | 90.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 60 | 66.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 61 | 66.25 | wind | 3.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 65 | 66.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 15 |
| 70 | 66.30 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 73 | 66.32 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 74 | 66.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 5 |
| 76 | 66.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 77 | 66.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 82 | 66.33 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 94 | 66.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 15 |
| 96 | 66.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 97 | 66.38 | radiation | 40.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 98 | 66.38 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 105 | 66.40 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 108 | 66.41 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 109 | 66.41 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 110 | 66.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 135 | 66.47 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 141 | 66.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 148 | 66.52 | radiation | 20.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 151 | 66.53 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 153 | 66.53 | humidity | 70.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 156 | 66.54 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 168 | 66.54 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 175 | 66.56 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 176 | 66.57 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 180 | 66.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 181 | 66.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 182 | 66.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 184 | 66.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 187 | 66.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 188 | 66.59 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 22 | 10 |
| 189 | 66.60 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 190 | 66.60 | wind | 1.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 194 | 66.62 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 197 | 66.62 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 198 | 66.62 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 6 |
| 199 | 66.62 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 201 | 66.62 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 204 | 66.63 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 18 |
| 219 | 66.68 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 232 | 66.69 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 235 | 66.69 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 243 | 66.73 | temperature | 30.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 247 | 66.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 23 |
| 248 | 66.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 260 | 66.79 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 272 | 66.83 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 281 | 66.85 | radiation | 1.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 282 | 66.86 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 7 |
| 303 | 66.93 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 305 | 66.93 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 16 |
| 306 | 66.94 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 310 | 66.95 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 311 | 66.96 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 315 | 66.97 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 333 | 66.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 338 | 66.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 20 |
| 341 | 66.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 352 | 67.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 360 | 67.07 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 362 | 67.08 | wind | 3.0 | 30 | > th | dose independent | rect. | 14 | 4 |
| 364 | 67.08 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 4 |
| 368 | 67.11 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 371 | 67.12 | radiation | 40.0 | 270 | > th | dose independent | sin | 13 | NA |
| 372 | 67.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 9 |
| 374 | 67.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 376 | 67.13 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 381 | 67.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 15 |
| 382 | 67.14 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 18 |
| 384 | 67.14 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 18 |
| 386 | 67.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 5 |
| 400 | 67.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 404 | 67.18 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 20 |
| 408 | 67.19 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 410 | 67.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 426 | 67.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 427 | 67.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 432 | 67.22 | radiation | 40.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 482 | 67.25 | temperature | 30.0 | 10 | < th | dose independent | rect. | 18 | 20 |
| 501 | 67.26 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 511 | 67.29 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 18 |
| 514 | 67.29 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 515 | 67.30 | radiation | 30.0 | 270 | < th | dose independent | sin | 14 | NA |
| 517 | 67.30 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 524 | 67.31 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 526 | 67.31 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 544 | 67.33 | temperature | 15.0 | 90 | > th | dose independent | rect. | 20 | 16 |
| 545 | 67.33 | humidity | 90.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 549 | 67.34 | humidity | 70.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 550 | 67.34 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 552 | 67.34 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 556 | 67.36 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 564 | 67.38 | humidity | 70.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 579 | 67.41 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 580 | 67.41 | radiation | 20.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 591 | 67.43 | wind | 1.0 | 30 | > th | dose dependent | rect. | 14 | 6 |
| 594 | 67.43 | wind | 1.0 | 90 | > th | dose dependent | rect. | 12 | 8 |
| 629 | 67.44 | humidity | 50.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 633 | 67.44 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 638 | 67.46 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 644 | 67.48 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 6 |
| 645 | 67.48 | radiation | 40.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 646 | 67.48 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 667 | 67.49 | temperature | 15.0 | 30 | > th | dose independent | rect. | 18 | 20 |
| 668 | 67.49 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 675 | 67.50 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 677 | 67.50 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 682 | 67.50 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 684 | 67.51 | humidity | 70.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 685 | 67.51 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 687 | 67.51 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 697 | 67.53 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 701 | 67.54 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 4 |
| 733 | 67.56 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 15 |
| 756 | 67.60 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 767 | 67.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 768 | 67.62 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 771 | 67.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 797 | 67.67 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 816 | 67.70 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 823 | 67.71 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 18 | 20 |
| 828 | 67.71 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 18 | 20 |
| 835 | 67.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 836 | 67.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 859 | 67.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 3 |
| 863 | 67.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 864 | 67.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 868 | 67.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 1 |
| 875 | 67.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 879 | 67.77 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 18 | 20 |
| 885 | 67.78 | radiation | 40.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 890 | 67.79 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 904 | 67.79 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 17 |
| 912 | 67.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 916 | 67.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 933 | 67.81 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 4 |
| 934 | 67.81 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 937 | 67.81 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 19 | 11 |
| 938 | 67.81 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 942 | 67.81 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 18 | 20 |
| 956 | 67.82 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 18 | 20 |
| 957 | 67.83 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 4 |
| 961 | 67.83 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 14 | 4 |
| 973 | 67.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 978 | 67.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 980 | 67.85 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 1000 | 67.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 23 |