BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0537800 Os04g0537800|AK103654
(276 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G60720.1 | chr3:22442035-22443608 FORWARD LENGTH=280 202 1e-52
AT2G01660.1 | chr2:290973-292496 REVERSE LENGTH=289 174 6e-44
AT5G37660.2 | chr5:14959842-14961165 FORWARD LENGTH=299 150 5e-37
AT1G70690.1 | chr1:26652099-26653381 FORWARD LENGTH=300 130 5e-31
AT5G48540.1 | chr5:19669096-19669887 REVERSE LENGTH=264 95 4e-20
AT2G33330.1 | chr2:14123181-14125028 REVERSE LENGTH=305 90 1e-18
AT1G04520.1 | chr1:1231852-1233787 FORWARD LENGTH=308 89 3e-18
AT5G43980.1 | chr5:17694817-17696458 REVERSE LENGTH=304 85 5e-17
AT3G22060.1 | chr3:7771065-7772137 FORWARD LENGTH=253 60 1e-09
AT1G63590.1 | chr1:23579896-23580702 FORWARD LENGTH=269 59 3e-09
AT4G21230.1 | chr4:11319244-11321679 REVERSE LENGTH=643 56 2e-08
AT3G04370.1 | chr3:1159430-1160959 FORWARD LENGTH=320 54 9e-08
AT3G58310.1 | chr3:21584038-21585030 REVERSE LENGTH=259 54 1e-07
AT5G40380.1 | chr5:16152121-16155038 FORWARD LENGTH=652 53 1e-07
AT4G23310.1 | chr4:12185737-12188763 FORWARD LENGTH=831 50 1e-06
AT1G61750.1 | chr1:22804613-22806318 REVERSE LENGTH=342 50 1e-06
AT1G19090.1 | chr1:6590350-6592615 FORWARD LENGTH=601 49 3e-06
>AT3G60720.1 | chr3:22442035-22443608 FORWARD LENGTH=280
Length = 279
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 143/229 (62%), Gaps = 4/229 (1%)
Query: 26 TGTFIYAGCSPSKYQPGTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNGTGDGA--AAYG 83
+ FIY GCSP KY P TPFE +NSF G++ + + A +G
Sbjct: 26 SHIFIYGGCSPEKYTPNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFG 85
Query: 84 LYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVY 143
LYQCR DL ++DC+ C++ +V Q+ +C +Y ASLQLEGC++RY++++F+G+PD ++ Y
Sbjct: 86 LYQCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRY 145
Query: 144 RKCST-STSGDGDFLKNRDAVLAALQGGLANGYKXXXXXXXXXXXXCLGDLAAGDCTTCL 202
+KCS+ S D DF K RD VL+ L+ GYK C+GDL+ DCT CL
Sbjct: 146 KKCSSKSVENDYDFFKRRDDVLSDLESTQL-GYKVSRSGLVEGYAQCVGDLSPSDCTACL 204
Query: 203 AQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYFRPSQDYSQDDVGRT 251
A++VG+LK CG+++AA+VYLAQCY RYW +G+Y S + D VG++
Sbjct: 205 AESVGKLKNLCGSAVAAEVYLAQCYARYWGSGYYDFSSDPTNGDHVGKS 253
>AT2G01660.1 | chr2:290973-292496 REVERSE LENGTH=289
Length = 288
Score = 174 bits (440), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 138/262 (52%), Gaps = 11/262 (4%)
Query: 24 AATGTFIYAGCSPSKYQPGTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNG-TGDGAAAY 82
AA TFIY GCS KY PG+P+E YN+FT +NG +GD ++ Y
Sbjct: 22 AAVDTFIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNFT--TNGISGDSSSVY 79
Query: 83 GLYQCRGDL--GNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNA 140
GLYQCRGDL G+ DCA CV AV +L +CA A +LQLEGC+V+YD++ F+G D
Sbjct: 80 GLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVEDKT 139
Query: 141 MVYRKCSTSTSGDGDFLKNRDAVLAALQGGLANGYKXXXXXXXXXXXXCLGDLAAGDCTT 200
+V R+C + D + RD+V+ +L Y+ C GDL+A +C
Sbjct: 140 VVVRRCGPPVGYNSDEMTRRDSVVGSLAASSGGSYRVGVSGELQGVAQCTGDLSATECQD 199
Query: 201 CLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYFRPSQDYS------QDDVGRTXXX 254
CL +A+G+L+ CG + DVYLA+CY RY A G + R + D++ +T
Sbjct: 200 CLMEAIGRLRTDCGGAAWGDVYLAKCYARYSARGGHSRANGYGGNRNNNDDDEIEKTLAI 259
Query: 255 XXXXXXXXXXXXXFISFLRKSC 276
F+SF+ KSC
Sbjct: 260 IVGLIAGVTLLVVFLSFMAKSC 281
>AT5G37660.2 | chr5:14959842-14961165 FORWARD LENGTH=299
Length = 298
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 120/224 (53%), Gaps = 4/224 (1%)
Query: 24 AATGTFIYAGCSPSKYQPGTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNGTGDGAAAYG 83
+AT TF++ GCS K+ P + +E YN+FT + + D A G
Sbjct: 32 SATDTFVFGGCSQQKFSPASAYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSD--TARG 89
Query: 84 LYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVY 143
L+QCRGDL DCA CV AV Q+ +C +LQL GCY++YD+ +F+GQ D +V
Sbjct: 90 LFQCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKTVVL 149
Query: 144 RKCSTSTSGDGDFLKNRDAVLAALQGGLANGYKXXXXXXXXXXXXCLGDLAAGDCTTCLA 203
+KC +S + D + RDAVL L G ++ C+GDL +C CL
Sbjct: 150 KKCGSSEGYNTDGISRRDAVLTELVNG-GGYFRAGGSGDVQGMGQCVGDLTVSECQDCLG 208
Query: 204 QAVGQLKGTCGTSLAADVYLAQCYVRYWANGF-YFRPSQDYSQD 246
A+G+LK CGT++ D++LA+CY RY +G ++ S +Y +
Sbjct: 209 TAIGRLKNDCGTAVFGDMFLAKCYARYSTDGAQHYAKSHNYKTN 252
>AT1G70690.1 | chr1:26652099-26653381 FORWARD LENGTH=300
Length = 299
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 122/265 (46%), Gaps = 13/265 (4%)
Query: 24 AATGTFIYAGCSPSKYQPGTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNGTGDGAAAYG 83
+ T +IYA CSP+K+ P + +E Y +FT + YG
Sbjct: 26 SPTDNYIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVTVYG 85
Query: 84 LYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVY 143
+YQCRGDL C+ CV AV Q+ +C+ +Y+ LQ+E C +RYD+ +F+G D ++
Sbjct: 86 IYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKTLIL 145
Query: 144 RKCSTSTS-GDGDFLKNRDAVLAALQGGLANGYKXXXXXXXXXXXXCLGDLAAGDCTTCL 202
KC D D L V+ +L G Y+ C GDL+ C CL
Sbjct: 146 NKCGQPMEFNDQDALTKASDVIGSLGTG-DGSYRTGGNGNVQGVAQCSGDLSTSQCQDCL 204
Query: 203 AQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYFR--PSQDY-------SQDD--VGRT 251
+ A+G+LK CG + VYL++CY R+ G + R P ++ ++DD VG+T
Sbjct: 205 SDAIGRLKSDCGMAQGGYVYLSKCYARFSVGGSHARQTPGPNFGHEGEKGNKDDNGVGKT 264
Query: 252 XXXXXXXXXXXXXXXXFISFLRKSC 276
F++F+ K C
Sbjct: 265 LAIIIGIVTLIILLVVFLAFVGKCC 289
>AT5G48540.1 | chr5:19669096-19669887 REVERSE LENGTH=264
Length = 263
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 12/194 (6%)
Query: 69 TAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRY 128
T S+ + YGL QCRGD+ N DC+ C++DA ++ EVC + + + C++RY
Sbjct: 62 TTTSSSYNNKEKVYGLAQCRGDISNTDCSTCIQDAAKKIREVCQNQSDSRILYDFCFLRY 121
Query: 129 DSSNFVGQPDN--AMVYRKCSTSTSGDGD---------FLKNRDAVLAALQGGLANGY-K 176
NF+G+ D ++Y + T D F K R + GL G K
Sbjct: 122 SQENFIGKLDTGAGLIYFNVANVTEIDPKKFDNELGALFDKIRSEAVLPKNKGLGKGKTK 181
Query: 177 XXXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFY 236
C DL+ DC C A AVG TC V + CYVRY FY
Sbjct: 182 LTPFVTLNGLVQCTRDLSELDCAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRYEFYPFY 241
Query: 237 FRPSQDYSQDDVGR 250
F + VGR
Sbjct: 242 FPLDPAKTGPSVGR 255
>AT2G33330.1 | chr2:14123181-14125028 REVERSE LENGTH=305
Length = 304
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 83 GLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMV 142
GL+QCRGDL N DC CV ++C AA +QL GCY+ Y+ S F ++
Sbjct: 88 GLFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFAQISGMELL 147
Query: 143 YRKCSTSTSGDGDFLKNRDAVLAALQGGLA--NGYKXXXXXXXXXXXXCLGDLAAGDCTT 200
++ C + F + RD +Q G+ +G+ C GD+ DC+
Sbjct: 148 FKTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGHGFYATTYESVYVLGQCEGDIGDSDCSG 207
Query: 201 CLAQAVGQLKGTCGTSLAADVYLAQCYVRY--WANG 234
C+ A+ + + CG+S++ +YL +C+V Y + NG
Sbjct: 208 CIKNALQRAQVECGSSISGQIYLHKCFVGYSFYPNG 243
>AT1G04520.1 | chr1:1231852-1233787 FORWARD LENGTH=308
Length = 307
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 84 LYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVY 143
L+QCRGDL N DC CV +++C A+ +QL GCY+ Y+ S F M++
Sbjct: 87 LFQCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGFSQISGMEMLF 146
Query: 144 RKCSTSTSGDGDFLKNRDAVLAALQGGLA--NGYKXXXXXXXXXXXXCLGDLAAGDCTTC 201
+ C + F + RD +Q G+ +G+ C GD+ DC+ C
Sbjct: 147 KTCGKNNIAGTGFEERRDTAFGVMQNGVVSGHGFYATTYESVYVLGQCEGDVGDTDCSGC 206
Query: 202 LAQAVGQLKGTCGTSLAADVYLAQCYV--RYWANG 234
+ A+ + + CG+S++ +YL +C++ Y+ NG
Sbjct: 207 VKNALEKAQVECGSSISGQIYLHKCFIAYSYYPNG 241
>AT5G43980.1 | chr5:17694817-17696458 REVERSE LENGTH=304
Length = 303
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 72 SNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAA------AYAASLQLEGCY 125
++GT + A G++QCRGDL NA C CV ++++C AA + L GCY
Sbjct: 69 TSGTDNTTAVIGVFQCRGDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCY 128
Query: 126 VRYDSSNFVGQPDNAMVYRKCSTSTSGDGDFLKNRDAVLAALQGGLAN----------GY 175
+RY+SS F M++R C S D F+ R+ + G+ G+
Sbjct: 129 IRYESSGFRQTSGTEMLFRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGF 188
Query: 176 KXXXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRY 230
C G L DC C+ + K CG S + VYL +C+V Y
Sbjct: 189 YAGQYESVYVLGQCEGSLGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSY 243
>AT3G22060.1 | chr3:7771065-7772137 FORWARD LENGTH=253
Length = 252
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 65/173 (37%), Gaps = 11/173 (6%)
Query: 68 FTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVR 127
F A S G GL CRGD ++DC +C+ A+ +L + C A + + C V+
Sbjct: 72 FAASSTGNTPNNVN-GLALCRGDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVK 130
Query: 128 YDSSNFVGQPD-NAMVYRKCSTSTSGDGDFLKNRDAVLAAL---------QGGLANGYKX 177
Y S+NF G+ D Y + S F A+L L Q A G K
Sbjct: 131 YSSTNFFGKIDFENRFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKN 190
Query: 178 XXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRY 230
C DL + C CL +G+L C V C RY
Sbjct: 191 IGKNKLYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRY 243
>AT1G63590.1 | chr1:23579896-23580702 FORWARD LENGTH=269
Length = 268
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 21/190 (11%)
Query: 63 GGYNSFTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLE 122
G Y++ TAG + YG++ CRGDL C+ CV ++ + C +A +
Sbjct: 63 GSYSNATAGLSPN----TIYGMFLCRGDLNRTSCSDCVNATTLEIYKSCFYRKSALVISN 118
Query: 123 GCYVRYDSSNFVGQPDNAMVYRKCSTSTSGDG------DFLKNRDAVL--AALQGGLANG 174
C VRY + +F ++ + ST S D L+ DA++ A+L L
Sbjct: 119 ECIVRYSNVSFFTLVEDVPSTARFSTGNSLDSPQFFSQTLLEKLDALILRASLSSSLPVP 178
Query: 175 Y---------KXXXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQ 225
Y + C DL +CT CL AV +L G C + A ++ +
Sbjct: 179 YFVDDQQHVTQLEGSYDLHAMVQCSPDLDPRNCTVCLRLAVQRLSGCCSHAQFARIFYTK 238
Query: 226 CYVRYWANGF 235
C + Y +
Sbjct: 239 CLITYEISAL 248
>AT4G21230.1 | chr4:11319244-11321679 REVERSE LENGTH=643
Length = 642
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 60/159 (37%), Gaps = 9/159 (5%)
Query: 87 CRGDLG-NADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNA-MVYR 144
CRGD+ N DC +C+ A QL E C A++ LE C RY S +GQ + Y
Sbjct: 83 CRGDVKPNQDCISCITTAAKQLVESCPNIIEANIWLEKCMFRYTSRIILGQMEPVPFSYT 142
Query: 145 KCSTSTS-------GDGDFLKNRDAVLAALQGGLANGYKXXXXXXXXXXXXCLGDLAAGD 197
+ S + G GD L + A + A + C DL+ D
Sbjct: 143 SSNVSVTDKEGFSKGLGDLLDSLGAKIDAANETKEVKFAAGVKGTIYALAQCTPDLSESD 202
Query: 198 CTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFY 236
C CLAQ + C CY R+ F+
Sbjct: 203 CRICLAQIFAGVPTCCDGKTGGWWTNPSCYFRFEVYPFF 241
>AT3G04370.1 | chr3:1159430-1160959 FORWARD LENGTH=320
Length = 319
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 19/189 (10%)
Query: 76 GDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSS---- 131
+ A G +QCR D + C CV D + C A +A + L GC++ Y
Sbjct: 92 NEKHAVSGWFQCREDYPSEICHKCVGDLREISSRSCGNATSARIHLRGCHLIYKFERIDT 151
Query: 132 -----------NFVGQPDNAMVYRKCSTSTSGDGD-FLKNRDAVLAALQGGLA--NGYKX 177
P++ ++++ C +T+ F + R L A + G+ +G+
Sbjct: 152 PGAQVNNHHKYKLFETPEHGLIHKICDGATAETFPGFEEMRTEALTAAETGVVDGHGFYE 211
Query: 178 XXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFYF 237
C G + A DC C++ A C S+A +YL C+V Y +
Sbjct: 212 DSYKLLHVVAQCDGHVEACDCGECISSAAAAAAEECRWSIAGQIYLEGCHVGYTYHPHEL 271
Query: 238 RPSQDYSQD 246
P+ Y ++
Sbjct: 272 -PNDSYHEE 279
>AT3G58310.1 | chr3:21584038-21585030 REVERSE LENGTH=259
Length = 258
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 76/223 (34%), Gaps = 17/223 (7%)
Query: 26 TGTFIYAGCSPS--KYQPGTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNGTGDGAAAYG 83
T +++Y CS + KY+ +P+EG G F +G D Y
Sbjct: 35 TNSYLYHKCSEAEGKYKSKSPYEGNLNFLTNDMYKDTFVRG---FVYAYHG-DDPNTVYI 90
Query: 84 LYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVY 143
L QCRGD + C +C+ A +L C A + + C ++ + F + D+ +
Sbjct: 91 LLQCRGDSYGSKCGSCLSTATSELRRRCPMNKAGIVWFDKCLLKISPTAFFEKIDDKNKF 150
Query: 144 RKCSTSTSGDGDFLKNR-DAVLAALQGG----------LANGYKXXXXXXXXXXXXCLGD 192
ST D + A+L L G C D
Sbjct: 151 YMYSTKKVSDPALFNVKTKALLTELTAKATRRSDKLLLYETGEMKLGKMKLYGMVQCRRD 210
Query: 193 LAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGF 235
L C TCL + +G+L C V C RY F
Sbjct: 211 LWFTVCKTCLDKIIGELPKCCDGKEGGRVLSGSCNFRYEIYPF 253
>AT5G40380.1 | chr5:16152121-16155038 FORWARD LENGTH=652
Length = 651
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 79 AAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQP- 137
+ Y L QC DL +DC C A ++ C + +A + L+GC++RY++ F +
Sbjct: 82 TSIYALIQCHDDLSPSDCQLCYAIARTRIPR-CLPSSSARIFLDGCFLRYETYEFYDESV 140
Query: 138 DNAMVYRKCSTSTSGDGDF---LKNRDAVLAALQGGL----ANGYKXXXXXXXXXXXXCL 190
+A CS T D F + A +A +GG NG C
Sbjct: 141 SDASDSFSCSNDTVLDPRFGFQVSETAARVAVRKGGFGVAGENGVH--------ALAQCW 192
Query: 191 GDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFY 236
L DC CL +AV ++K C + CY+RY + FY
Sbjct: 193 ESLGKEDCRVCLEKAVKEVK-RCVSRREGRAMNTGCYLRYSDHKFY 237
>AT4G23310.1 | chr4:12185737-12188763 FORWARD LENGTH=831
Length = 830
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 57/157 (36%), Gaps = 9/157 (5%)
Query: 83 GLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMV 142
GL+ CRGDL C CV AV C +L + C +RY + D V
Sbjct: 83 GLFDCRGDLPPEVCHNCVAFAVKDTLIRCPNERDVTLFYDECTLRYSNLVVTSALDPTYV 142
Query: 143 YRKCST--STSGDGDFLKNRDAVLAALQG-------GLANGYKXXXXXXXXXXXXCLGDL 193
Y C + + ++ N +L+ L G N C GD+
Sbjct: 143 YHVCPSWATFPRSSTYMTNLITLLSTLSSPSASYSTGFQNATAGKHPDRVTGLFNCRGDV 202
Query: 194 AAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRY 230
+ C C++ AV + C +Y QC +RY
Sbjct: 203 SPEVCRRCVSFAVNETSTRCPIEKEVTLYYDQCTLRY 239
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 19/159 (11%)
Query: 64 GYNSFTAGSNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEG 123
G+ + TAG + GL+ CRGD+ C CV AV + + C +L +
Sbjct: 179 GFQNATAGKHPD----RVTGLFNCRGDVSPEVCRRCVSFAVNETSTRCPIEKEVTLYYDQ 234
Query: 124 CYVRYDSSNFVGQPDN--AMVYRKCSTSTSGDGDFLKNRDAVLAALQGGL---ANGYKX- 177
C +RY + N + + ++ TS + K D VL + AN K
Sbjct: 235 CTLRYSNRNILSTSNTNGGIILANSQNMTSNEQARFK--DLVLTTMNQATIAAANSSKRF 292
Query: 178 -------XXXXXXXXXXXCLGDLAAGDCTTCLAQAVGQL 209
C DL DC +CL Q + QL
Sbjct: 293 DARSANFTTLHSLYTLVQCTHDLTRQDCLSCLQQIINQL 331
>AT1G61750.1 | chr1:22804613-22806318 REVERSE LENGTH=342
Length = 341
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 75/223 (33%), Gaps = 20/223 (8%)
Query: 25 ATGTFIYAGCSPS-KYQPGTPFEGXXXXXXXXXXXXXXXGGYNSFTAGSNGTGDGAAAYG 83
A T++ + C S Y P + ++ G+ S+ +GS+ T YG
Sbjct: 25 AQPTYLLSYCYTSGNYTPNSSYKSNLDTLISVLDSQSSNKGFYSYASGSSPT---TTVYG 81
Query: 84 LYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSSNFVGQPDNAMVY 143
Y CRGD+ ++ C C+ A + C A + E C++RY S D
Sbjct: 82 SYLCRGDISSSTCETCISRASKNVFIWCPVQKEAIIWYEECFLRYSSRKIFSILDQGPFV 141
Query: 144 RKCSTSTSGDGDFLKNRDAVLAALQGGLANGYKXXXXXXXXX--------------XXXC 189
S T+ + N V + + Y C
Sbjct: 142 TWTSYDTTLYQFYFIN--TVEYRMDRLIQEAYSSSSYFAEETYHVSYLGEVYDLNGLVQC 199
Query: 190 LGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWA 232
DL DC CL A + K C A VY + C + Y A
Sbjct: 200 TPDLNQYDCYRCLKSAYNETKDCCYGKRFALVYSSNCMLTYKA 242
>AT1G19090.1 | chr1:6590350-6592615 FORWARD LENGTH=601
Length = 600
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 9/171 (5%)
Query: 72 SNGTGDGAAAYGLYQCRGDLGNADCAACVRDAVGQLNEVCAAAYAASLQLEGCYVRYDSS 131
S+ T Y QCR DL +DC C ++ +L C+ + + + C++R+D
Sbjct: 71 SSITDVSPPIYVFLQCREDLSVSDCRHCFNESRLELERKCSGS-GGRIHSDRCFLRFDDR 129
Query: 132 NFVGQ-PDNAMVYRKCSTSTSGDGDFLKNRD-----AVLAALQGGLANGYKXXXXXXXXX 185
+F + D C + +G G+F + D L A++ G
Sbjct: 130 DFSEEFVDPTFDKANCEETGTGFGEFWRFLDEALVNVTLKAVKNGGFGAASVIKTEAVYA 189
Query: 186 XXXCLGDLAAGDCTTCLAQAVGQLKGTCGTSLAADVYLAQCYVRYWANGFY 236
C L C CL A L+ G A + CY++Y + F+
Sbjct: 190 LAQCWQTLDENTCRECLVNARSSLRACDGHE--ARAFFTGCYLKYSTHKFF 238
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,886,766
Number of extensions: 172826
Number of successful extensions: 591
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 548
Number of HSP's successfully gapped: 23
Length of query: 276
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 179
Effective length of database: 8,447,217
Effective search space: 1512051843
Effective search space used: 1512051843
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)