Os05g0112800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os05g0112800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 260.77 | 0.759 | 7.85 | -6.39 | 3.3 | 3.28 | 2.04 | -8.36 | -0.937 | 9 | 20.45 | 4355 | 10.1 | 1.35 |
| 317.14 | 0.829 | 7.54 | -4.97 | 3.43 | 3.4 | 1.57 | -- | -0.803 | 9.08 | 16.25 | 11525 | 10.1 | 1.86 |
| 274.81 | 0.772 | 7.85 | -6.31 | 3.3 | 3.26 | -- | -8.42 | -0.931 | 8.98 | 20.54 | 4352 | 10.1 | 1.33 |
| 309.91 | 0.82 | 7.57 | -4.84 | 3.32 | 3.85 | -- | -- | -0.787 | 8.9 | 12.73 | 11581 | 13.3 | 2.68 |
| 812.22 | 1.33 | 7.97 | -6.87 | -- | 5.62 | -- | -10.2 | -1.16 | -- | 6.128 | 6100 | 8.95 | 1.68 |
| 525.97 | 1.08 | 7.35 | -2.68 | 3.26 | -- | 1.97 | -- | 0.228 | 8.92 | -- | -- | -- | -- |
| 539.13 | 1.09 | 7.35 | -2.62 | 3.26 | -- | -- | -- | 0.229 | 8.91 | -- | -- | -- | -- |
| 410.75 | 0.944 | 7.73 | -5.03 | -- | 5.54 | -- | -- | -0.706 | -- | -6.82 | 6646 | 0.75 | 1.95 |
| 674.07 | 1.21 | 7.34 | -- | 3.25 | 1.32 | -- | -- | 0.271 | 9.06 | 15.92 | 7134 | 15.1 | 4.77 |
| 1145.46 | 1.58 | 7.44 | -2.62 | -- | -- | -- | -- | 0.251 | -- | -- | -- | -- | -- |
| 719.73 | 1.25 | 7.28 | -- | 3.25 | -- | -- | -- | 0.52 | 8.97 | -- | -- | -- | -- |
| 793.42 | 1.31 | 7.56 | -- | -- | 3.82 | -- | -- | -0.0149 | -- | -30.11 | 6657 | 1.04 | 0.0334 |
| 1326.31 | 1.7 | 7.37 | -- | -- | -- | -- | -- | 0.542 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.51 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 4 | 267.45 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 11 | 268.43 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 12 | 268.52 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 6 |
| 43 | 269.35 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 117 | 271.28 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 139 | 271.83 | temperature | 10 | 4320 | > th | dose dependent | sin | 4 | NA |
| 240 | 273.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 294 | 274.72 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 310 | 275.02 | temperature | 30 | 4320 | < th | dose dependent | sin | 4 | NA |
| 424 | 276.82 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 650 | 279.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 653 | 279.74 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 725 | 280.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 735 | 280.49 | temperature | 10 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 973 | 282.46 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 979 | 282.52 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 984 | 282.52 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 23 |