Os08g0136500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os08g0136500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 430.59 | 0.975 | 4.39 | 0.709 | 1.23 | -2.96 | 0.226 | -3.66 | -0.0121 | 23.1 | 16.03 | 76 | -- | -- |
| 436.68 | 0.973 | 4.33 | 1.23 | 1.23 | -2.67 | 0.877 | -- | 0.112 | 23.1 | 18.82 | 71 | -- | -- |
| 430.44 | 0.966 | 4.4 | 0.652 | 1.21 | -2.83 | -- | -3.61 | -0.0247 | 23.1 | 17.15 | 71 | -- | -- |
| 439.3 | 0.976 | 4.32 | 1.2 | 1.23 | -2.7 | -- | -- | 0.147 | 22.9 | 19.7 | 83 | -- | -- |
| 494.29 | 1.04 | 4.32 | 0.9 | -- | -3.73 | -- | -3.32 | 0.143 | -- | 17.15 | 71 | -- | -- |
| 543.06 | 1.09 | 4.42 | 0.652 | 1.91 | -- | 1.49 | -- | -0.315 | 0.836 | -- | -- | -- | -- |
| 552.43 | 1.1 | 4.42 | 0.597 | 1.9 | -- | -- | -- | -0.322 | 0.769 | -- | -- | -- | -- |
| 500.43 | 1.04 | 4.26 | 1.37 | -- | -3.55 | -- | -- | 0.289 | -- | 19.24 | 10 | -- | -- |
| 473.86 | 1.01 | 4.37 | -- | 1.38 | -2.27 | -- | -- | -0.0596 | 23.2 | 20 | 117 | -- | -- |
| 779.22 | 1.3 | 4.39 | 0.666 | -- | -- | -- | -- | -0.287 | -- | -- | -- | -- | -- |
| 561.84 | 1.11 | 4.44 | -- | 1.91 | -- | -- | -- | -0.389 | 0.784 | -- | -- | -- | -- |
| 546.89 | 1.09 | 4.31 | -- | -- | -3.22 | -- | -- | 0.0888 | -- | 19.7 | 7 | -- | -- |
| 790.93 | 1.31 | 4.41 | -- | -- | -- | -- | -- | -0.361 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 422.27 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 2 | 422.63 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 13 | 427.00 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 14 | 427.39 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 18 | 428.83 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 32 | 431.20 | temperature | 15.0 | 90 | > th | dose dependent | no | NA | NA |
| 35 | 431.60 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 36 | 431.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 37 | 431.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 41 | 431.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 51 | 432.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 22 |
| 52 | 432.28 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 55 | 432.53 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 64 | 432.86 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 79 | 433.39 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 80 | 433.42 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 86 | 433.80 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 104 | 435.11 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 105 | 435.12 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 106 | 435.15 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 120 | 435.79 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 125 | 435.95 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 127 | 436.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 136 | 436.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 142 | 436.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 143 | 436.82 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 148 | 437.23 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 155 | 437.74 | temperature | 25.0 | 720 | < th | dose independent | rect. | 4 | 19 |
| 156 | 437.75 | temperature | 25.0 | 720 | < th | dose independent | rect. | 7 | 16 |
| 157 | 437.75 | temperature | 25.0 | 720 | < th | dose independent | rect. | 2 | 21 |
| 159 | 437.82 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 168 | 438.13 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 174 | 438.41 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 207 | 439.34 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 212 | 439.53 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 213 | 439.54 | temperature | 25.0 | 720 | > th | dose independent | rect. | 6 | 20 |
| 215 | 439.55 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 221 | 439.73 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 249 | 440.30 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 265 | 440.64 | temperature | 25.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 267 | 440.65 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 272 | 440.71 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 13 | 14 |
| 293 | 440.97 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 315 | 441.22 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 319 | 441.27 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 330 | 441.42 | temperature | 25.0 | 720 | < th | dose independent | rect. | 7 | 22 |
| 333 | 441.46 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 338 | 441.52 | temperature | 25.0 | 1440 | > th | dose independent | sin | 17 | NA |
| 343 | 441.59 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 371 | 441.82 | temperature | 25.0 | 720 | > th | dose independent | rect. | 19 | 23 |
| 373 | 441.85 | temperature | 25.0 | 720 | < th | dose independent | sin | 21 | NA |
| 445 | 442.67 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 452 | 442.70 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 506 | 443.23 | temperature | 25.0 | 720 | > th | dose independent | no | NA | NA |
| 529 | 443.46 | temperature | 25.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 574 | 443.85 | temperature | 25.0 | 720 | < th | dose independent | no | NA | NA |
| 605 | 444.13 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 657 | 444.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 661 | 444.64 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 689 | 444.85 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 23 |
| 701 | 444.95 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 734 | 445.19 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 761 | 445.33 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 774 | 445.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 805 | 445.70 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |