Os03g0140500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os03g0140500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.36 | 0.391 | 8.27 | 1.04 | 1.13 | -1.24 | -0.735 | -1.14 | 0.28 | 18.7 | 25.1 | 802 | -- | -- |
| 70.94 | 0.392 | 8.29 | 0.845 | 1.1 | -1.13 | -0.512 | -- | 0.25 | 18.7 | 25.74 | 772 | -- | -- |
| 70.6 | 0.391 | 8.28 | 1.02 | 1.15 | -1.24 | -- | -1 | 0.273 | 18.7 | 25.1 | 866 | -- | -- |
| 71.64 | 0.394 | 8.3 | 0.853 | 1.11 | -1.14 | -- | -- | 0.235 | 18.7 | 25.7 | 758 | -- | -- |
| 111.37 | 0.492 | 8.31 | 0.797 | -- | -1.76 | -- | -0.239 | 0.0669 | -- | 29.96 | 519 | -- | -- |
| 90.32 | 0.446 | 8.25 | 1.16 | 1.23 | -- | -0.514 | -- | 0.479 | 19.2 | -- | -- | -- | -- |
| 91.02 | 0.447 | 8.25 | 1.17 | 1.23 | -- | -- | -- | 0.478 | 19.2 | -- | -- | -- | -- |
| 110.61 | 0.49 | 8.3 | 0.685 | -- | -1.91 | -- | -- | 0.111 | -- | 30.73 | 509 | -- | -- |
| 83.14 | 0.425 | 8.33 | -- | 1.19 | -1.57 | -- | -- | 0.0784 | 19.1 | 22.7 | 7778 | -- | -- |
| 170.91 | 0.611 | 8.22 | 1.15 | -- | -- | -- | -- | 0.457 | -- | -- | -- | -- | -- |
| 127.25 | 0.528 | 8.28 | -- | 1.22 | -- | -- | -- | 0.348 | 19.2 | -- | -- | -- | -- |
| 121.83 | 0.514 | 8.32 | -- | -- | -2.12 | -- | -- | -0.00254 | -- | 30.3 | 512 | -- | -- |
| 205.78 | 0.67 | 8.25 | -- | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.87 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 21 | 68.21 | temperature | 25 | 270 | < th | dose dependent | sin | 2 | NA |
| 58 | 69.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 90 | 69.48 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 93 | 69.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 124 | 69.76 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 129 | 69.79 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 221 | 70.74 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 222 | 70.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 257 | 70.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 290 | 71.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 332 | 71.14 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 477 | 71.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 497 | 71.39 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |
| 521 | 71.41 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 534 | 71.44 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 572 | 71.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 597 | 71.56 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 698 | 71.78 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 713 | 71.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 717 | 71.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 808 | 72.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 825 | 72.10 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 5 |
| 849 | 72.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 859 | 72.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 7 |
| 868 | 72.20 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 965 | 72.34 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |