BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0140500 Os03g0140500|AK106342
(286 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33330.1 | chr2:14123181-14125028 REVERSE LENGTH=305 179 2e-45
AT1G04520.1 | chr1:1231852-1233787 FORWARD LENGTH=308 175 2e-44
AT5G43980.1 | chr5:17694817-17696458 REVERSE LENGTH=304 139 2e-33
AT2G01660.1 | chr2:290973-292496 REVERSE LENGTH=289 104 4e-23
AT3G60720.1 | chr3:22442035-22443608 FORWARD LENGTH=280 99 4e-21
AT5G37660.2 | chr5:14959842-14961165 FORWARD LENGTH=299 97 1e-20
AT1G70690.1 | chr1:26652099-26653381 FORWARD LENGTH=300 91 8e-19
AT3G04370.1 | chr3:1159430-1160959 FORWARD LENGTH=320 85 5e-17
AT5G48540.1 | chr5:19669096-19669887 REVERSE LENGTH=264 68 7e-12
AT5G40380.1 | chr5:16152121-16155038 FORWARD LENGTH=652 60 1e-09
AT1G63570.1 | chr1:23575450-23576304 FORWARD LENGTH=285 54 7e-08
AT3G21970.1 | chr3:7742459-7743480 FORWARD LENGTH=265 51 5e-07
AT4G23310.1 | chr4:12185737-12188763 FORWARD LENGTH=831 51 6e-07
AT1G61750.1 | chr1:22804613-22806318 REVERSE LENGTH=342 51 6e-07
AT1G19090.1 | chr1:6590350-6592615 FORWARD LENGTH=601 50 1e-06
AT4G20670.1 | chr4:11092539-11093621 FORWARD LENGTH=281 50 2e-06
AT3G58310.1 | chr3:21584038-21585030 REVERSE LENGTH=259 50 2e-06
AT3G22060.1 | chr3:7771065-7772137 FORWARD LENGTH=253 49 2e-06
AT4G21230.1 | chr4:11319244-11321679 REVERSE LENGTH=643 47 8e-06
>AT2G33330.1 | chr2:14123181-14125028 REVERSE LENGTH=305
Length = 304
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 120/216 (55%), Gaps = 15/216 (6%)
Query: 84 GLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGTQML 143
GLFQCRGDLS +DC CVSR ++CG ++AARVQL+GC LYEISGF Q+SG ++L
Sbjct: 88 GLFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFAQISGMELL 147
Query: 144 FKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSSGDCG 203
FKTC FE RRDTAF M+ V G+G FYAT+Y+ VY + QCEGD+ DC
Sbjct: 148 FKTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGHG-FYATTYESVYVLGQCEGDIGDSDCS 206
Query: 204 QCVTQAVQHVEVECGGAPSGQVYLEKCYISYS--------------XXXXXXXXXXXXXX 249
C+ A+Q +VECG + SGQ+YL KC++ YS
Sbjct: 207 GCIKNALQRAQVECGSSISGQIYLHKCFVGYSFYPNGVPKRSSPYPSSGSSGSSSSSSSS 266
Query: 250 XXTAKTXXXXXXXXXXXXXXXXCLLFARSLVKKKED 285
T KT CLLF ++L+KKK D
Sbjct: 267 GTTGKTVAIIVGGTAGVGFLVICLLFVKNLMKKKYD 302
>AT1G04520.1 | chr1:1231852-1233787 FORWARD LENGTH=308
Length = 307
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 120/220 (54%), Gaps = 20/220 (9%)
Query: 85 LFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGTQMLF 144
LFQCRGDLS DC CVSR ++CG ++A+RVQL+GC LYE+SGF Q+SG +MLF
Sbjct: 87 LFQCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGFSQISGMEMLF 146
Query: 145 KTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSSGDCGQ 204
KTC FE RRDTAF M+ V G+ GFYAT+Y+ VY + QCEGD+ DC
Sbjct: 147 KTCGKNNIAGTGFEERRDTAFGVMQNGVVSGH-GFYATTYESVYVLGQCEGDVGDTDCSG 205
Query: 205 CVTQAVQHVEVECGGAPSGQVYLEKCYISYS-------------------XXXXXXXXXX 245
CV A++ +VECG + SGQ+YL KC+I+YS
Sbjct: 206 CVKNALEKAQVECGSSISGQIYLHKCFIAYSYYPNGVPRRSSSSSSSSSSSSSGSSNSDP 265
Query: 246 XXXXXXTAKTXXXXXXXXXXXXXXXXCLLFARSLVKKKED 285
T KT CLLFA++L++KK D
Sbjct: 266 STSTGATGKTVAIIVGGAAGVGFLVICLLFAKNLMRKKHD 305
>AT5G43980.1 | chr5:17694817-17696458 REVERSE LENGTH=304
Length = 303
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 123/275 (44%), Gaps = 18/275 (6%)
Query: 29 DLYALVYKGCSNQSFPG-GAVPPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGLFQ 87
D L++KGC+NQ P V V G+FQ
Sbjct: 24 DYKNLIFKGCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVTSGTDNTTAVIGVFQ 83
Query: 88 CRGDLSGSDCAACVSRAMSSWSEVCGAS------VAARVQLTGCLALYEISGFPQVSGTQ 141
CRGDL + C CVS+ S++CG VAARV L GC YE SGF Q SGT+
Sbjct: 84 CRGDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQTSGTE 143
Query: 142 MLFKTCXXXXXXXXDFEMRRDTAFAQMEASV-------GGGNGGFYATSYQQVYAMAQCE 194
MLF+ C F +R+TAF E V GGG GGFYA Y+ VY + QCE
Sbjct: 144 MLFRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQCE 203
Query: 195 GDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISYSXXXXXXXXXX----XXXXX 250
G L + DCG+CV + + ECG + SGQVYL+KC++SYS
Sbjct: 204 GSLGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSYSYYSHGVPNIEPLSGGEKRQ 263
Query: 251 XTAKTXXXXXXXXXXXXXXXXCLLFARSLVKKKED 285
T +T CLL RS +KKK +
Sbjct: 264 HTERTIALAVGGVFVLGFVIVCLLVLRSAMKKKSN 298
>AT2G01660.1 | chr2:290973-292496 REVERSE LENGTH=289
Length = 288
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 82 VFGLFQCRGDLSGS--DCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSG 139
V+GL+QCRGDLS DCA CV+RA+S +C + +QL GC Y+ + F V
Sbjct: 78 VYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVED 137
Query: 140 TQMLFKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSS 199
++ + C D RRD+ + AS GG + ++ +AQC GDLS+
Sbjct: 138 KTVVVRRCGPPVGYNSDEMTRRDSVVGSLAASSGGS---YRVGVSGELQGVAQCTGDLSA 194
Query: 200 GDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISYS 235
+C C+ +A+ + +CGGA G VYL KCY YS
Sbjct: 195 TECQDCLMEAIGRLRTDCGGAAWGDVYLAKCYARYS 230
>AT3G60720.1 | chr3:22442035-22443608 FORWARD LENGTH=280
Length = 279
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGTQ 141
VFGL+QCR DL SDC+ C+ ++ + +C S A +QL GC YE + F T
Sbjct: 83 VFGLYQCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTS 142
Query: 142 MLFKTCXXXXXXXX-DFEMRRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSSG 200
+ +K C DF RRD + +E++ G+ + V AQC GDLS
Sbjct: 143 LRYKKCSSKSVENDYDFFKRRDDVLSDLEST----QLGYKVSRSGLVEGYAQCVGDLSPS 198
Query: 201 DCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
DC C+ ++V ++ CG A + +VYL +CY Y
Sbjct: 199 DCTACLAESVGKLKNLCGSAVAAEVYLAQCYARY 232
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVS 138
V G QC GDLS SDC AC++ ++ +CG++VAA V L C A Y SG+ S
Sbjct: 185 VEGYAQCVGDLSPSDCTACLAESVGKLKNLCGSAVAAEVYLAQCYARYWGSGYYDFS 241
>AT5G37660.2 | chr5:14959842-14961165 FORWARD LENGTH=299
Length = 298
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 86/204 (42%), Gaps = 5/204 (2%)
Query: 33 LVYKGCSNQSF-PGGAVPPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGLFQCRGD 91
V+ GCS Q F P A + GLFQCRGD
Sbjct: 37 FVFGGCSQQKFSPASAYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSDTARGLFQCRGD 96
Query: 92 LSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGTQMLFKTCXXXX 151
LS DCA CV+RA+S +C + +QL GC Y+ F ++ K C
Sbjct: 97 LSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKTVVLKKCGSSE 156
Query: 152 XXXXDFEMRRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSSGDCGQCVTQAVQ 211
D RRD ++ V GG G F A V M QC GDL+ +C C+ A+
Sbjct: 157 GYNTDGISRRDAVLTEL---VNGG-GYFRAGGSGDVQGMGQCVGDLTVSECQDCLGTAIG 212
Query: 212 HVEVECGGAPSGQVYLEKCYISYS 235
++ +CG A G ++L KCY YS
Sbjct: 213 RLKNDCGTAVFGDMFLAKCYARYS 236
>AT1G70690.1 | chr1:26652099-26653381 FORWARD LENGTH=300
Length = 299
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGTQ 141
V+G++QCRGDL + C+ CVS A++ +C S + +Q+ CL Y+ F V
Sbjct: 83 VYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKT 142
Query: 142 MLFKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSSGD 201
++ C + T + + S+G G+G + V +AQC GDLS+
Sbjct: 143 LILNKCGQPMEFNDQDAL---TKASDVIGSLGTGDGSYRTGGNGNVQGVAQCSGDLSTSQ 199
Query: 202 CGQCVTQAVQHVEVECGGAPSGQVYLEKCYISYS 235
C C++ A+ ++ +CG A G VYL KCY +S
Sbjct: 200 CQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFS 233
>AT3G04370.1 | chr3:1159430-1160959 FORWARD LENGTH=320
Length = 319
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 17/170 (10%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFP----QV 137
V G FQCR D C CV S CG + +AR+ L GC +Y+ QV
Sbjct: 97 VSGWFQCREDYPSEICHKCVGDLREISSRSCGNATSARIHLRGCHLIYKFERIDTPGAQV 156
Query: 138 SGTQ-----------MLFKTCXXXXXXXXD-FEMRRDTAFAQMEASVGGGNGGFYATSYQ 185
+ ++ K C FE R A E V G+G FY SY+
Sbjct: 157 NNHHKYKLFETPEHGLIHKICDGATAETFPGFEEMRTEALTAAETGVVDGHG-FYEDSYK 215
Query: 186 QVYAMAQCEGDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISYS 235
++ +AQC+G + + DCG+C++ A EC + +GQ+YLE C++ Y+
Sbjct: 216 LLHVVAQCDGHVEACDCGECISSAAAAAAEECRWSIAGQIYLEGCHVGYT 265
>AT5G48540.1 | chr5:19669096-19669887 REVERSE LENGTH=264
Length = 263
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 9/162 (5%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGT- 140
V+GL QCRGD+S +DC+ C+ A EVC +R+ C Y F T
Sbjct: 74 VYGLAQCRGDISNTDCSTCIQDAAKKIREVCQNQSDSRILYDFCFLRYSQENFIGKLDTG 133
Query: 141 --QMLFKTCXXXXXXXXDFEMRRDTAFAQMEASV------GGGNGGFYATSYQQVYAMAQ 192
+ F F+ F ++ + G G G T + + + Q
Sbjct: 134 AGLIYFNVANVTEIDPKKFDNELGALFDKIRSEAVLPKNKGLGKGKTKLTPFVTLNGLVQ 193
Query: 193 CEGDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
C DLS DC QC AV C +V CY+ Y
Sbjct: 194 CTRDLSELDCAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRY 235
>AT5G40380.1 | chr5:16152121-16155038 FORWARD LENGTH=652
Length = 651
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGF--PQVSG 139
++ L QC DLS SDC C + A + C S +AR+ L GC YE F VS
Sbjct: 84 IYALIQCHDDLSPSDCQLCYAIARTRIPR-CLPSSSARIFLDGCFLRYETYEFYDESVSD 142
Query: 140 TQMLFKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSS 199
F +C F + ++ A V GGF V+A+AQC L
Sbjct: 143 ASDSF-SCSNDTVLDPRFGFQ----VSETAARVAVRKGGFGVAGENGVHALAQCWESLGK 197
Query: 200 GDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISYS 235
DC C+ +AV+ V+ C G+ CY+ YS
Sbjct: 198 EDCRVCLEKAVKEVK-RCVSRREGRAMNTGCYLRYS 232
>AT1G63570.1 | chr1:23575450-23576304 FORWARD LENGTH=285
Length = 284
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 11/164 (6%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALY-EISGFPQVSGT 140
V+G+F CRGD++ + C+ CV A + C + A + C+ Y +S F +
Sbjct: 76 VYGMFLCRGDINTTSCSDCVQTAAIEIATNCTLNKRAFIYYDECMVRYSNVSFFSEFESK 135
Query: 141 QMLFKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGGFYATSYQQ----------VYAM 190
++ + F Q+ +V Y Q+ + +M
Sbjct: 136 PVIVRYSLRSAPNSNRFNQTLSNKLDQLIPNVSPSTLIPYFVEDQERVTQLEGSYDLVSM 195
Query: 191 AQCEGDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
QC DL +C C+ A V CG S ++ KC + Y
Sbjct: 196 IQCSPDLDPSNCTICLRFAYATVSTCCGVPSSALIFTPKCILRY 239
>AT3G21970.1 | chr3:7742459-7743480 FORWARD LENGTH=265
Length = 264
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 59/145 (40%), Gaps = 17/145 (11%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFP---QVS 138
VF L QCRGD GS C +C+S A+S E C + A + CL EIS ++
Sbjct: 90 VFVLLQCRGDSFGSKCHSCLSTAVSGLRERCPGNRGATIWYDQCLL--EISSVDSEGRIH 147
Query: 139 GTQMLF-KTCXXXXXXXXDFE-MRRDTAFAQM-----EASVGGGNGGFYATSYQQV---- 187
+M + + FE RRD M ++ G G YA ++
Sbjct: 148 YKRMFYMQNPTNVTNDPKRFEDKRRDLLHKLMLEATKDSKENGAKGLLYAVGEMRIGRNK 207
Query: 188 -YAMAQCEGDLSSGDCGQCVTQAVQ 211
YAM QC DL C C+ Q
Sbjct: 208 MYAMVQCTQDLWQTGCHVCLEWITQ 232
>AT4G23310.1 | chr4:12185737-12188763 FORWARD LENGTH=831
Length = 830
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 11/157 (7%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGTQ 141
V GLF CRGD+S C CVS A++ S C + C Y S T
Sbjct: 192 VTGLFNCRGDVSPEVCRRCVSFAVNETSTRCPIEKEVTLYYDQCTLRYSNRNILSTSNTN 251
Query: 142 ---MLFKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGGFYA-----TSYQQVYAMAQC 193
+L + F+ T Q + + F A T+ +Y + QC
Sbjct: 252 GGIILANSQNMTSNEQARFKDLVLTTMNQATIAAANSSKRFDARSANFTTLHSLYTLVQC 311
Query: 194 EGDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKC 230
DL+ DC C+ Q + + E G GQ + C
Sbjct: 312 THDLTRQDCLSCLQQIINQLPTEKIG---GQFIVPSC 345
>AT1G61750.1 | chr1:22804613-22806318 REVERSE LENGTH=342
Length = 341
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGF------- 134
V+G + CRGD+S S C C+SRA + C A + C Y
Sbjct: 79 VYGSYLCRGDISSSTCETCISRASKNVFIWCPVQKEAIIWYEECFLRYSSRKIFSILDQG 138
Query: 135 PQVSGTQMLFKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGGFYATSYQ-QVY---AM 190
P V+ T + T E R D + +S Y SY +VY +
Sbjct: 139 PFVTWTS--YDTTLYQFYFINTVEYRMDRLIQEAYSSSSYFAEETYHVSYLGEVYDLNGL 196
Query: 191 AQCEGDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
QC DL+ DC +C+ A + C G VY C ++Y
Sbjct: 197 VQCTPDLNQYDCYRCLKSAYNETKDCCYGKRFALVYSSNCMLTY 240
>AT1G19090.1 | chr1:6590350-6592615 FORWARD LENGTH=601
Length = 600
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 59/157 (37%), Gaps = 6/157 (3%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISGFPQVSGTQ 141
++ QCR DLS SDC C + + C S R+ C ++ F +
Sbjct: 80 IYVFLQCREDLSVSDCRHCFNESRLELERKCSGS-GGRIHSDRCFLRFDDRDFSEEFVDP 138
Query: 142 MLFK-TCXXXXXXXXDFEMRRDTAFAQ--MEASVGGGNGGFYATSYQQVYAMAQCEGDLS 198
K C +F D A ++A GG G + VYA+AQC L
Sbjct: 139 TFDKANCEETGTGFGEFWRFLDEALVNVTLKAVKNGGFGAASVIKTEAVYALAQCWQTLD 198
Query: 199 SGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISYS 235
C +C+ A + C G + + CY+ YS
Sbjct: 199 ENTCRECLVNARSSLRA-CDGH-EARAFFTGCYLKYS 233
>AT4G20670.1 | chr4:11092539-11093621 FORWARD LENGTH=281
Length = 280
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 12/165 (7%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGC-LALYEISGFPQVSGT 140
VF +FQCRGD S C C+S A+S C + A + C L + ++ F ++
Sbjct: 98 VFVMFQCRGDSYWSKCPPCISTAVSGLRRRCPRNKGAIIWYDQCLLKISSVASFNKIDYE 157
Query: 141 QMLFKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNG-----------GFYATSYQQVYA 189
+ + F ++ N G ++VYA
Sbjct: 158 NDFYLSNPNNMSDRGLFNKETSALLEKLAYKASDRNNLDGKQLVLYAAGEKRIGTKKVYA 217
Query: 190 MAQCEGDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
M QC DL C +C+ ++ C G G+V+ C Y
Sbjct: 218 MVQCTKDLIFTKCFECLEGILRKFPQCCDGKRGGRVFGTSCNFRY 262
>AT3G58310.1 | chr3:21584038-21585030 REVERSE LENGTH=259
Length = 258
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 59/161 (36%), Gaps = 8/161 (4%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGC-LALYEISGFPQVSGT 140
V+ L QCRGD GS C +C+S A S C + A V C L + + F ++
Sbjct: 88 VYILLQCRGDSYGSKCGSCLSTATSELRRRCPMNKAGIVWFDKCLLKISPTAFFEKIDDK 147
Query: 141 QMLFKTCXXXXXXXXDFEMRRDTAFAQMEASVGGGNGG--FYAT-----SYQQVYAMAQC 193
+ F ++ ++ A + Y T ++Y M QC
Sbjct: 148 NKFYMYSTKKVSDPALFNVKTKALLTELTAKATRRSDKLLLYETGEMKLGKMKLYGMVQC 207
Query: 194 EGDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
DL C C+ + + + C G G+V C Y
Sbjct: 208 RRDLWFTVCKTCLDKIIGELPKCCDGKEGGRVLSGSCNFRY 248
>AT3G22060.1 | chr3:7771065-7772137 FORWARD LENGTH=253
Length = 252
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 60/160 (37%), Gaps = 7/160 (4%)
Query: 82 VFGLFQCRGDLSGSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYEISG-FPQVSGT 140
V GL CRGD S SDC +C+ A+ + C + A V CL Y + F ++
Sbjct: 84 VNGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFE 143
Query: 141 QMLFKTCXXXXXXXXDFEMRRDTAFAQM-EASVGGGNGGFYATSYQQV-----YAMAQCE 194
+ F + ++ + + N +AT + + Y + QC
Sbjct: 144 NRFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIGKNKLYGLVQCT 203
Query: 195 GDLSSGDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
DL S C C+ + + C G G+V C Y
Sbjct: 204 RDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRY 243
>AT4G21230.1 | chr4:11319244-11321679 REVERSE LENGTH=643
Length = 642
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 10/155 (6%)
Query: 88 CRGDLS-GSDCAACVSRAMSSWSEVCGASVAARVQLTGCLALYE---ISGFPQVSGTQML 143
CRGD+ DC +C++ A E C + A + L C+ Y I G Q+
Sbjct: 83 CRGDVKPNQDCISCITTAAKQLVESCPNIIEANIWLEKCMFRYTSRIILG--QMEPVPFS 140
Query: 144 FKTCXXXXXXXXDFEM----RRDTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSS 199
+ + F D+ A+++A+ F A +YA+AQC DLS
Sbjct: 141 YTSSNVSVTDKEGFSKGLGDLLDSLGAKIDAANETKEVKFAAGVKGTIYALAQCTPDLSE 200
Query: 200 GDCGQCVTQAVQHVEVECGGAPSGQVYLEKCYISY 234
DC C+ Q V C G G CY +
Sbjct: 201 SDCRICLAQIFAGVPTCCDGKTGGWWTNPSCYFRF 235
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,155,765
Number of extensions: 119865
Number of successful extensions: 601
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 559
Number of HSP's successfully gapped: 33
Length of query: 286
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 188
Effective length of database: 8,419,801
Effective search space: 1582922588
Effective search space used: 1582922588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)